RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 COX10Q12887 443 aa11.72□□□□□ -0.53
HDAC3-213ENST00000492506 RIN1Q13671 783 aa11.72□□□□□ -0.53
HDAC3-213ENST00000492506 GTF2H2Q13888 395 aa11.72□□□□□ -0.53
HDAC3-213ENST00000492506 GALEQ14376 348 aa11.72□□□□□ -0.53
HDAC3-213ENST00000492506 PON3Q15166 354 aa11.72□□□□□ -0.53
HDAC3-213ENST00000492506 ETFDHQ16134 617 aa11.72□□□□□ -0.53
HDAC3-213ENST00000492506 FAM180BQ6P0A1 224 aa11.72□□□□□ -0.53
HDAC3-213ENST00000492506 GTF2H2CQ6P1K8 395 aa11.72□□□□□ -0.53
HDAC3-213ENST00000492506 LARP4Q71RC2 724 aaKnown RBP eCLIP11.72□□□□□ -0.53
HDAC3-213ENST00000492506 GOLGA7Q7Z5G4 137 aa11.72□□□□□ -0.53
HDAC3-213ENST00000492506 MILR1Q7Z6M3 343 aa11.72□□□□□ -0.53
HDAC3-213ENST00000492506 SNX29P2Q8IUI4 249 aa11.72□□□□□ -0.53
HDAC3-213ENST00000492506 RDH10Q8IZV5 341 aa11.72□□□□□ -0.53
HDAC3-213ENST00000492506 CENPLQ8N0S6 344 aaPredicted RBP11.72□□□□□ -0.53
HDAC3-213ENST00000492506 TUBGCP3Q96CW5 907 aa11.72□□□□□ -0.53
HDAC3-213ENST00000492506 CNRIP1Q96F85 164 aaPredicted RBP11.72□□□□□ -0.53
HDAC3-213ENST00000492506 MBOAT4Q96T53 435 aa11.72□□□□□ -0.53
HDAC3-213ENST00000492506 IPPKQ9H8X2 491 aa11.72□□□□□ -0.53
HDAC3-213ENST00000492506 ANKRA2Q9H9E1 313 aa11.72□□□□□ -0.53
HDAC3-213ENST00000492506 ACOT13Q9NPJ3 140 aa11.72□□□□□ -0.53
HDAC3-213ENST00000492506 YAE1D1Q9NRH1 226 aa11.72□□□□□ -0.53
HDAC3-213ENST00000492506 PRODH2Q9UF12 536 aa11.72□□□□□ -0.53
HDAC3-213ENST00000492506 A0A1W2PP18 115 aa11.71□□□□□ -0.53
HDAC3-213ENST00000492506 C1orf226A1L170 272 aa11.71□□□□□ -0.53
HDAC3-213ENST00000492506 FXYD1O00168 92 aa11.71□□□□□ -0.53
HDAC3-213ENST00000492506 OR7A17O14581 309 aa11.71□□□□□ -0.53
HDAC3-213ENST00000492506 SEC14L5O43304 696 aa11.71□□□□□ -0.53
HDAC3-213ENST00000492506 ERAL1O75616 437 aaKnown RBP11.71□□□□□ -0.53
HDAC3-213ENST00000492506 SOD3P08294 240 aa11.71□□□□□ -0.53
HDAC3-213ENST00000492506 LTA4HP09960 611 aaKnown RBP11.71□□□□□ -0.53
HDAC3-213ENST00000492506 DANCRP0C864 163 aa11.71□□□□□ -0.53
HDAC3-213ENST00000492506 DBTP11182 482 aaKnown RBP11.71□□□□□ -0.53
HDAC3-213ENST00000492506 TGFBR2P37173 567 aa11.71□□□□□ -0.53
HDAC3-213ENST00000492506 NFYCQ13952 458 aa11.71□□□□□ -0.53
HDAC3-213ENST00000492506 EFR3AQ14156 821 aa11.71□□□□□ -0.53
HDAC3-213ENST00000492506 MFSD13AQ14CX5 517 aa11.71□□□□□ -0.53
HDAC3-213ENST00000492506 QPRTQ15274 297 aa11.71□□□□□ -0.53
HDAC3-213ENST00000492506 CARTPTQ16568 116 aa11.71□□□□□ -0.53
HDAC3-213ENST00000492506 PFKFB4Q16877 469 aa11.71□□□□□ -0.53
HDAC3-213ENST00000492506 EXOC3L2Q2M3D2 409 aa11.71□□□□□ -0.53
HDAC3-213ENST00000492506 ADAM5Q6NVV9 412 aa11.71□□□□□ -0.53
HDAC3-213ENST00000492506 NPSR1Q6W5P4 371 aa11.71□□□□□ -0.53
HDAC3-213ENST00000492506 ADGRG3Q86Y34 549 aa11.71□□□□□ -0.53
HDAC3-213ENST00000492506 LINC00518Q8N0U6 118 aa11.71□□□□□ -0.53
HDAC3-213ENST00000492506 CCNYL1Q8N7R7 359 aa11.71□□□□□ -0.53
HDAC3-213ENST00000492506 OR2M3Q8NG83 312 aa11.71□□□□□ -0.53
HDAC3-213ENST00000492506 OR5M1Q8NGP8 315 aa11.71□□□□□ -0.53
HDAC3-213ENST00000492506 RHEBL1Q8TAI7 183 aa11.71□□□□□ -0.53
HDAC3-213ENST00000492506 AKAP1Q92667 903 aaKnown RBP eCLIP11.71□□□□□ -0.53
HDAC3-213ENST00000492506 VSTM2LQ96N03 204 aa11.71□□□□□ -0.53
HDAC3-213ENST00000492506 OPALINQ96PE5 141 aa11.71□□□□□ -0.53
HDAC3-213ENST00000492506 CDK15Q96Q40 435 aa11.71□□□□□ -0.53
HDAC3-213ENST00000492506 RTN4RQ9BZR6 473 aa11.71□□□□□ -0.53
HDAC3-213ENST00000492506 SLCO5A1Q9H2Y9 848 aa11.71□□□□□ -0.53
HDAC3-213ENST00000492506 A0A0X1KG70 313 aa11.7□□□□□ -0.54
HDAC3-213ENST00000492506 OR2M5A3KFT3 312 aa11.7□□□□□ -0.54
HDAC3-213ENST00000492506 SLC35F4A4IF30 521 aa11.7□□□□□ -0.54
HDAC3-213ENST00000492506 UPK1AO00322 258 aa11.7□□□□□ -0.54
HDAC3-213ENST00000492506 SLC22A5O76082 557 aa11.7□□□□□ -0.54
HDAC3-213ENST00000492506 SIX3O95343 332 aaPredicted RBP11.7□□□□□ -0.54
HDAC3-213ENST00000492506 CLDN9O95484 217 aa11.7□□□□□ -0.54
HDAC3-213ENST00000492506 PAHP00439 452 aa11.7□□□□□ -0.54
HDAC3-213ENST00000492506 TP53P04637 393 aaPredicted RBP11.7□□□□□ -0.54
HDAC3-213ENST00000492506 LBPP18428 481 aa11.7□□□□□ -0.54
HDAC3-213ENST00000492506 HK1P19367 917 aa11.7□□□□□ -0.54
HDAC3-213ENST00000492506 IL11P20809 199 aa11.7□□□□□ -0.54
HDAC3-213ENST00000492506 C4BPBP20851 252 aa11.7□□□□□ -0.54
HDAC3-213ENST00000492506 ACVR1BP36896 505 aa11.7□□□□□ -0.54
HDAC3-213ENST00000492506 SLC6A8P48029 635 aa11.7□□□□□ -0.54
HDAC3-213ENST00000492506 PNLIPRP2P54317 469 aa11.7□□□□□ -0.54
HDAC3-213ENST00000492506 IRF9Q00978 393 aa11.7□□□□□ -0.54
HDAC3-213ENST00000492506 EMX2Q04743 252 aa11.7□□□□□ -0.54
HDAC3-213ENST00000492506 MRPL28Q13084 256 aaKnown RBP11.7□□□□□ -0.54
HDAC3-213ENST00000492506 MAB21L1Q13394 359 aa11.7□□□□□ -0.54
HDAC3-213ENST00000492506 FAM83EQ2M2I3 478 aa11.7□□□□□ -0.54
HDAC3-213ENST00000492506 CTU2Q2VPK5 515 aaKnown RBP11.7□□□□□ -0.54
HDAC3-213ENST00000492506 ZIK1Q3SY52 487 aaPredicted RBP11.7□□□□□ -0.54
HDAC3-213ENST00000492506 CHRFAM7AQ494W8 412 aa11.7□□□□□ -0.54
HDAC3-213ENST00000492506 ZNF628Q5EBL2 1059 aa11.7□□□□□ -0.54
HDAC3-213ENST00000492506 OTUD3Q5T2D3 398 aaPredicted RBP11.7□□□□□ -0.54
HDAC3-213ENST00000492506 GDPGP1Q6ZNW5 385 aa11.7□□□□□ -0.54
HDAC3-213ENST00000492506 RNF130Q86XS8 419 aa11.7□□□□□ -0.54
HDAC3-213ENST00000492506 WFDC8Q8IUA0 241 aa11.7□□□□□ -0.54
HDAC3-213ENST00000492506 TMEM151AQ8N4L1 468 aa11.7□□□□□ -0.54
HDAC3-213ENST00000492506 C1orf52Q8N6N3 182 aaKnown RBP11.7□□□□□ -0.54
HDAC3-213ENST00000492506 OR4K17Q8NGC6 315 aa11.7□□□□□ -0.54
HDAC3-213ENST00000492506 OR4N2Q8NGD1 307 aa11.7□□□□□ -0.54
HDAC3-213ENST00000492506 OR52B6Q8NGF0 335 aa11.7□□□□□ -0.54
HDAC3-213ENST00000492506 ZNF675Q8TD23 568 aa11.7□□□□□ -0.54
HDAC3-213ENST00000492506 KCTD4Q8WVF5 259 aa11.7□□□□□ -0.54
HDAC3-213ENST00000492506 MYDGFQ969H8 173 aa11.7□□□□□ -0.54
HDAC3-213ENST00000492506 TM4SF18Q96CE8 201 aa11.7□□□□□ -0.54
HDAC3-213ENST00000492506 ZBED6CLQ96FA7 236 aaPredicted RBP11.7□□□□□ -0.54
HDAC3-213ENST00000492506 RNF145Q96MT1 663 aa11.7□□□□□ -0.54
HDAC3-213ENST00000492506 GORASP2Q9H8Y8 452 aa11.7□□□□□ -0.54
HDAC3-213ENST00000492506 SDR39U1Q9NRG7 319 aaPredicted RBP11.7□□□□□ -0.54
HDAC3-213ENST00000492506 XPR1Q9UBH6 696 aa11.7□□□□□ -0.54
HDAC3-213ENST00000492506 FKBP7Q9Y680 259 aa11.7□□□□□ -0.54
HDAC3-213ENST00000492506 SESN1Q9Y6P5 492 aa11.7□□□□□ -0.54
HDAC3-213ENST00000492506 A8MV72 311 aaPredicted RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms