RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 LGI1O95970 557 aa14.5□□□□□ -0.09
PDLIM2-217ENST00000491330 GRPRP30550 384 aa14.5□□□□□ -0.09
PDLIM2-217ENST00000491330 ACVR1BP36896 505 aa14.5□□□□□ -0.09
PDLIM2-217ENST00000491330 CAPZA2P47755 286 aa14.5□□□□□ -0.09
PDLIM2-217ENST00000491330 SNRPD2P62316 118 aaKnown RBP14.5□□□□□ -0.09
PDLIM2-217ENST00000491330 DMTNQ08495 405 aa14.5□□□□□ -0.09
PDLIM2-217ENST00000491330 C3orf36Q3SXR2 165 aa14.5□□□□□ -0.09
PDLIM2-217ENST00000491330 HIKESHIQ53FT3 197 aa14.5□□□□□ -0.09
PDLIM2-217ENST00000491330 TTC33Q6PID6 262 aaPredicted RBP14.5□□□□□ -0.09
PDLIM2-217ENST00000491330 RETREG3Q86VR2 466 aa14.5□□□□□ -0.09
PDLIM2-217ENST00000491330 EPHX4Q8IUS5 362 aa14.5□□□□□ -0.09
PDLIM2-217ENST00000491330 OR4F15Q8NGB8 312 aa14.5□□□□□ -0.09
PDLIM2-217ENST00000491330 RP9Q8TA86 221 aaKnown RBP14.5□□□□□ -0.09
PDLIM2-217ENST00000491330 ZNF417Q8TAU3 575 aa14.5□□□□□ -0.09
PDLIM2-217ENST00000491330 NANOS1Q8WY41 292 aaKnown RBP14.5□□□□□ -0.09
PDLIM2-217ENST00000491330 PROX1Q92786 737 aa14.5□□□□□ -0.09
PDLIM2-217ENST00000491330 TAAR8Q969N4 342 aa14.5□□□□□ -0.09
PDLIM2-217ENST00000491330 LRRC58Q96CX6 371 aa14.5□□□□□ -0.09
PDLIM2-217ENST00000491330 ALKBH3Q96Q83 286 aaPredicted RBP14.5□□□□□ -0.09
PDLIM2-217ENST00000491330 SLC38A2Q96QD8 506 aa14.5□□□□□ -0.09
PDLIM2-217ENST00000491330 ZNF587Q96SQ5 575 aaPredicted RBP14.5□□□□□ -0.09
PDLIM2-217ENST00000491330 TMEM43Q9BTV4 400 aa14.5□□□□□ -0.09
PDLIM2-217ENST00000491330 KATNB1Q9BVA0 655 aa14.5□□□□□ -0.09
PDLIM2-217ENST00000491330 IKZF5Q9H5V7 419 aa14.5□□□□□ -0.09
PDLIM2-217ENST00000491330 CHST2Q9Y4C5 530 aa14.5□□□□□ -0.09
PDLIM2-217ENST00000491330 SETD2Q9BYW2 2564 aaPredicted RBP14.5□□□□□ -0.09
PDLIM2-217ENST00000491330 CELSR1Q9NYQ6 3014 aa14.5□□□□□ -0.09
PDLIM2-217ENST00000491330 ARID1AO14497 2285 aa14.49□□□□□ -0.09
PDLIM2-217ENST00000491330 FTCDNL1E5RQL4 147 aa14.49□□□□□ -0.09
PDLIM2-217ENST00000491330 MFN2O95140 757 aa14.49□□□□□ -0.09
PDLIM2-217ENST00000491330 CD247P20963 164 aa14.49□□□□□ -0.09
PDLIM2-217ENST00000491330 AHCYP23526 432 aa14.49□□□□□ -0.09
PDLIM2-217ENST00000491330 PCSK6P29122 969 aa14.49□□□□□ -0.09
PDLIM2-217ENST00000491330 PCGF2P35227 344 aa14.49□□□□□ -0.09
PDLIM2-217ENST00000491330 ARR3P36575 388 aa14.49□□□□□ -0.09
PDLIM2-217ENST00000491330 CGB2Q6NT52 195 aa14.49□□□□□ -0.09
PDLIM2-217ENST00000491330 KDM8Q8N371 416 aa14.49□□□□□ -0.09
PDLIM2-217ENST00000491330 FAM169BQ8N8A8 192 aa14.49□□□□□ -0.09
PDLIM2-217ENST00000491330 SMYD1Q8NB12 490 aa14.49□□□□□ -0.09
PDLIM2-217ENST00000491330 OR6N1Q8NGY5 312 aa14.49□□□□□ -0.09
PDLIM2-217ENST00000491330 C10orf82Q8WW14 230 aa14.49□□□□□ -0.09
PDLIM2-217ENST00000491330 MPP4Q96JB8 637 aa14.49□□□□□ -0.09
PDLIM2-217ENST00000491330 PTDSS2Q9BVG9 487 aa14.49□□□□□ -0.09
PDLIM2-217ENST00000491330 BAG5Q9UL15 447 aa14.49□□□□□ -0.09
PDLIM2-217ENST00000491330 MOKQ9UQ07 419 aa14.49□□□□□ -0.09
PDLIM2-217ENST00000491330 POFUT2Q9Y2G5 429 aa14.49□□□□□ -0.09
PDLIM2-217ENST00000491330 SPEF1Q9Y4P9 236 aa14.49□□□□□ -0.09
PDLIM2-217ENST00000491330 ARPC4-TTLL3A0A0A6YYG9 625 aa14.48□□□□□ -0.09
PDLIM2-217ENST00000491330 A0A0B4J2E0 115 aa14.48□□□□□ -0.09
PDLIM2-217ENST00000491330 A0A1B0GX12 115 aa14.48□□□□□ -0.09
PDLIM2-217ENST00000491330 RPL36A-HNRNPH2H7BZ11 118 aa14.48□□□□□ -0.09
PDLIM2-217ENST00000491330 H7C417 338 aa14.48□□□□□ -0.09
PDLIM2-217ENST00000491330 MRASO14807 208 aa14.48□□□□□ -0.09
PDLIM2-217ENST00000491330 CHP2O43745 196 aa14.48□□□□□ -0.09
PDLIM2-217ENST00000491330 TPST1O60507 370 aa14.48□□□□□ -0.09
PDLIM2-217ENST00000491330 FZD7O75084 574 aa14.48□□□□□ -0.09
PDLIM2-217ENST00000491330 CD8AP01732 235 aa14.48□□□□□ -0.09
PDLIM2-217ENST00000491330 IGHV4-39P01824 125 aa14.48□□□□□ -0.09
PDLIM2-217ENST00000491330 CBLP22681 906 aa14.48□□□□□ -0.09
PDLIM2-217ENST00000491330 LSP1P33241 339 aa14.48□□□□□ -0.09
PDLIM2-217ENST00000491330 P2RY4P51582 365 aa14.48□□□□□ -0.09
PDLIM2-217ENST00000491330 FOXG1P55316 489 aaPredicted RBP14.48□□□□□ -0.09
PDLIM2-217ENST00000491330 MTPNP58546 118 aa14.48□□□□□ -0.09
PDLIM2-217ENST00000491330 EGR4Q05215 589 aa14.48□□□□□ -0.09
PDLIM2-217ENST00000491330 PUDPQ08623 228 aa14.48□□□□□ -0.09
PDLIM2-217ENST00000491330 VMACQ2NL98 169 aa14.48□□□□□ -0.09
PDLIM2-217ENST00000491330 NANOGP8Q6NSW7 305 aa14.48□□□□□ -0.09
PDLIM2-217ENST00000491330 CCDC80Q76M96 950 aa14.48□□□□□ -0.09
PDLIM2-217ENST00000491330 PTOV1Q86YD1 416 aa14.48□□□□□ -0.09
PDLIM2-217ENST00000491330 BCL2L2Q92843 193 aaPredicted RBP14.48□□□□□ -0.09
PDLIM2-217ENST00000491330 LRR1Q96L50 414 aa14.48□□□□□ -0.09
PDLIM2-217ENST00000491330 NANOGQ9H9S0 305 aa14.48□□□□□ -0.09
PDLIM2-217ENST00000491330 CRLF2Q9HC73 371 aa14.48□□□□□ -0.09
PDLIM2-217ENST00000491330 FBXL3Q9UKT7 428 aa14.48□□□□□ -0.09
PDLIM2-217ENST00000491330 USP22Q9UPT9 525 aa14.48□□□□□ -0.09
PDLIM2-217ENST00000491330 A0A096LPE4 126 aa14.47□□□□□ -0.09
PDLIM2-217ENST00000491330 A0A1W2PPZ6 126 aa14.47□□□□□ -0.09
PDLIM2-217ENST00000491330 ATP6V1G2-DDX39BF2Z307 99 aa14.47□□□□□ -0.09
PDLIM2-217ENST00000491330 FBP2O00757 339 aa14.47□□□□□ -0.09
PDLIM2-217ENST00000491330 TLX2O43763 284 aaPredicted RBP14.47□□□□□ -0.09
PDLIM2-217ENST00000491330 UPK3AO75631 287 aa14.47□□□□□ -0.09
PDLIM2-217ENST00000491330 SLC25A16P16260 332 aa14.47□□□□□ -0.09
PDLIM2-217ENST00000491330 HTR2AP28223 471 aa14.47□□□□□ -0.09
PDLIM2-217ENST00000491330 SERPINF1P36955 418 aa14.47□□□□□ -0.09
PDLIM2-217ENST00000491330 EFNA4P52798 201 aa14.47□□□□□ -0.09
PDLIM2-217ENST00000491330 CDH12P55289 794 aa14.47□□□□□ -0.09
PDLIM2-217ENST00000491330 ARF1P84077 181 aaKnown RBP14.47□□□□□ -0.09
PDLIM2-217ENST00000491330 POU3F1Q03052 451 aaPredicted RBP14.47□□□□□ -0.09
PDLIM2-217ENST00000491330 REP15Q6BDI9 236 aa14.47□□□□□ -0.09
PDLIM2-217ENST00000491330 PXKQ7Z7A4 578 aa14.47□□□□□ -0.09
PDLIM2-217ENST00000491330 OR10A6Q8NH74 314 aa14.47□□□□□ -0.09
PDLIM2-217ENST00000491330 FAM168AQ92567 244 aa14.47□□□□□ -0.09
PDLIM2-217ENST00000491330 FBXO17Q96EF6 278 aa14.47□□□□□ -0.09
PDLIM2-217ENST00000491330 SLC19A3Q9BZV2 496 aa14.47□□□□□ -0.09
PDLIM2-217ENST00000491330 POLR2J2Q9GZM3 115 aaKnown RBP14.47□□□□□ -0.09
PDLIM2-217ENST00000491330 POLR2J3Q9H1A7 115 aaKnown RBP14.47□□□□□ -0.09
PDLIM2-217ENST00000491330 GPR35Q9HC97 309 aa14.47□□□□□ -0.09
PDLIM2-217ENST00000491330 MYOZ1Q9NP98 299 aaPredicted RBP14.47□□□□□ -0.09
PDLIM2-217ENST00000491330 MRPL39Q9NYK5 338 aaKnown RBP14.47□□□□□ -0.09
PDLIM2-217ENST00000491330 HRNRQ86YZ3 2850 aaPredicted RBP14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms