RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 A0A1W2PPZ6 126 aa15.69■□□□□ 0.1
HMGN1-219ENST00000491183 LRRN3E7EW58 273 aa15.69■□□□□ 0.1
HMGN1-219ENST00000491183 TRAF3IP2O43734 574 aaPredicted RBP15.69■□□□□ 0.1
HMGN1-219ENST00000491183 HLA-DOBP13765 273 aa15.69■□□□□ 0.1
HMGN1-219ENST00000491183 APOBEC3AP31941 199 aaPredicted RBP15.69■□□□□ 0.1
HMGN1-219ENST00000491183 GZMMP51124 257 aa15.69■□□□□ 0.1
HMGN1-219ENST00000491183 TUBA1BP68363 451 aa15.69■□□□□ 0.1
HMGN1-219ENST00000491183 TUBA4AP68366 448 aa15.69■□□□□ 0.1
HMGN1-219ENST00000491183 ARF1P84077 181 aaKnown RBP15.69■□□□□ 0.1
HMGN1-219ENST00000491183 C1DQ13901 141 aaKnown RBP15.69■□□□□ 0.1
HMGN1-219ENST00000491183 NPTX1Q15818 432 aa15.69■□□□□ 0.1
HMGN1-219ENST00000491183 NRF1Q16656 503 aa15.69■□□□□ 0.1
HMGN1-219ENST00000491183 CYP51A1Q16850 503 aa15.69■□□□□ 0.1
HMGN1-219ENST00000491183 MST1LQ2TV78 715 aa15.69■□□□□ 0.1
HMGN1-219ENST00000491183 PHYHD1Q5SRE7 291 aa15.69■□□□□ 0.1
HMGN1-219ENST00000491183 HMBOX1Q6NT76 420 aa15.69■□□□□ 0.1
HMGN1-219ENST00000491183 ANKRD16Q6P6B7 361 aa15.69■□□□□ 0.1
HMGN1-219ENST00000491183 LINC00114Q6XXX2 140 aa15.69■□□□□ 0.1
HMGN1-219ENST00000491183 TUBA1AQ71U36 451 aa15.69■□□□□ 0.1
HMGN1-219ENST00000491183 TMEM123Q8N131 208 aa15.69■□□□□ 0.1
HMGN1-219ENST00000491183 ADPRHL1Q8NDY3 354 aa15.69■□□□□ 0.1
HMGN1-219ENST00000491183 OR4D11Q8NGI4 311 aa15.69■□□□□ 0.1
HMGN1-219ENST00000491183 HTRA1Q92743 480 aa15.69■□□□□ 0.1
HMGN1-219ENST00000491183 ADAD1Q96M93 576 aaKnown RBP15.69■□□□□ 0.1
HMGN1-219ENST00000491183 MOGAT1Q96PD6 335 aa15.69■□□□□ 0.1
HMGN1-219ENST00000491183 OR2M2Q96R28 347 aa15.69■□□□□ 0.1
HMGN1-219ENST00000491183 MCHR1Q99705 422 aa15.69■□□□□ 0.1
HMGN1-219ENST00000491183 SIKE1Q9BRV8 207 aa15.69■□□□□ 0.1
HMGN1-219ENST00000491183 EVA1AQ9H8M9 152 aa15.69■□□□□ 0.1
HMGN1-219ENST00000491183 GPR35Q9HC97 309 aa15.69■□□□□ 0.1
HMGN1-219ENST00000491183 SELENONQ9NZV5 590 aa15.69■□□□□ 0.1
HMGN1-219ENST00000491183 CRNNQ9UBG3 495 aaPredicted RBP15.69■□□□□ 0.1
HMGN1-219ENST00000491183 SLC43A1O75387 559 aa15.68■□□□□ 0.1
HMGN1-219ENST00000491183 THY1P04216 161 aa15.68■□□□□ 0.1
HMGN1-219ENST00000491183 C8BP07358 591 aa15.68■□□□□ 0.1
HMGN1-219ENST00000491183 UBE2NP61088 152 aaKnown RBP15.68■□□□□ 0.1
HMGN1-219ENST00000491183 RANBP3LQ86VV4 465 aaPredicted RBP15.68■□□□□ 0.1
HMGN1-219ENST00000491183 RBM45Q8IUH3 476 aaKnown RBP15.68■□□□□ 0.1
HMGN1-219ENST00000491183 WDFY1Q8IWB7 410 aa15.68■□□□□ 0.1
HMGN1-219ENST00000491183 ANKK1Q8NFD2 765 aa15.68■□□□□ 0.1
HMGN1-219ENST00000491183 OR10H5Q8NGA6 315 aa15.68■□□□□ 0.1
HMGN1-219ENST00000491183 OR6T1Q8NGN1 323 aa15.68■□□□□ 0.1
HMGN1-219ENST00000491183 OR10A6Q8NH74 314 aa15.68■□□□□ 0.1
HMGN1-219ENST00000491183 ZNF317Q96PQ6 595 aaPredicted RBP15.68■□□□□ 0.1
HMGN1-219ENST00000491183 SLC38A2Q96QD8 506 aa15.68■□□□□ 0.1
HMGN1-219ENST00000491183 EPYCQ99645 322 aa15.68■□□□□ 0.1
HMGN1-219ENST00000491183 TMEM43Q9BTV4 400 aa15.68■□□□□ 0.1
HMGN1-219ENST00000491183 TMEM120AQ9BXJ8 343 aa15.68■□□□□ 0.1
HMGN1-219ENST00000491183 HIVEP2P31629 2446 aa15.68■□□□□ 0.1
HMGN1-219ENST00000491183 H7C417 338 aa15.67■□□□□ 0.1
HMGN1-219ENST00000491183 FMO6PO60774 539 aa15.67■□□□□ 0.1
HMGN1-219ENST00000491183 LYPD3O95274 346 aa15.67■□□□□ 0.1
HMGN1-219ENST00000491183 IGLV1-44P01699 117 aa15.67■□□□□ 0.1
HMGN1-219ENST00000491183 HOXB1P14653 301 aaPredicted RBP15.67■□□□□ 0.1
HMGN1-219ENST00000491183 NQO1P15559 274 aaKnown RBP15.67■□□□□ 0.1
HMGN1-219ENST00000491183 CD247P20963 164 aa15.67■□□□□ 0.1
HMGN1-219ENST00000491183 PCGF2P35227 344 aa15.67■□□□□ 0.1
HMGN1-219ENST00000491183 SH3BGRP55822 239 aaPredicted RBP15.67■□□□□ 0.1
HMGN1-219ENST00000491183 IL1RL1Q01638 556 aa15.67■□□□□ 0.1
HMGN1-219ENST00000491183 MFSD13AQ14CX5 517 aa15.67■□□□□ 0.1
HMGN1-219ENST00000491183 RAB35Q15286 201 aa15.67■□□□□ 0.1
HMGN1-219ENST00000491183 CEACAM16Q2WEN9 425 aa15.67■□□□□ 0.1
HMGN1-219ENST00000491183 SWT1Q5T5J6 900 aaKnown RBP15.67■□□□□ 0.1
HMGN1-219ENST00000491183 NANOGP8Q6NSW7 305 aa15.67■□□□□ 0.1
HMGN1-219ENST00000491183 ZNF613Q6PF04 617 aa15.67■□□□□ 0.1
HMGN1-219ENST00000491183 WDR88Q6ZMY6 472 aa15.67■□□□□ 0.1
HMGN1-219ENST00000491183 TSPYL5Q86VY4 417 aaPredicted RBP15.67■□□□□ 0.1
HMGN1-219ENST00000491183 PRIMA1Q86XR5 153 aa15.67■□□□□ 0.1
HMGN1-219ENST00000491183 GPR137CQ8N3F9 429 aa15.67■□□□□ 0.1
HMGN1-219ENST00000491183 SCAIQ8N9R8 606 aa15.67■□□□□ 0.1
HMGN1-219ENST00000491183 TAMM41Q96BW9 452 aa15.67■□□□□ 0.1
HMGN1-219ENST00000491183 TXNDC15Q96J42 360 aa15.67■□□□□ 0.1
HMGN1-219ENST00000491183 EMC6Q9BV81 110 aa15.67■□□□□ 0.1
HMGN1-219ENST00000491183 NANOGQ9H9S0 305 aa15.67■□□□□ 0.1
HMGN1-219ENST00000491183 SEC61A2Q9H9S3 476 aa15.67■□□□□ 0.1
HMGN1-219ENST00000491183 CRLF2Q9HC73 371 aa15.67■□□□□ 0.1
HMGN1-219ENST00000491183 MRPL39Q9NYK5 338 aaKnown RBP15.67■□□□□ 0.1
HMGN1-219ENST00000491183 CORINQ9Y5Q5 1042 aa15.67■□□□□ 0.1
HMGN1-219ENST00000491183 ARFGEF3Q5TH69 2177 aa15.67■□□□□ 0.1
HMGN1-219ENST00000491183 IGHV4-30-2A0A087WSY4 118 aa15.66■□□□□ 0.1
HMGN1-219ENST00000491183 A0A096LNT2 108 aa15.66■□□□□ 0.1
HMGN1-219ENST00000491183 ZNF503-AS2A6NEH8 195 aa15.66■□□□□ 0.1
HMGN1-219ENST00000491183 CECR9P0C854 216 aa15.66■□□□□ 0.1
HMGN1-219ENST00000491183 PAX7P23759 505 aa15.66■□□□□ 0.1
HMGN1-219ENST00000491183 NUDT6P53370 316 aa15.66■□□□□ 0.1
HMGN1-219ENST00000491183 CRYBA2P53672 197 aa15.66■□□□□ 0.1
HMGN1-219ENST00000491183 NAAAQ02083 359 aa15.66■□□□□ 0.1
HMGN1-219ENST00000491183 SF3A3Q12874 501 aaKnown RBP eCLIP15.66■□□□□ 0.16e-7■□□□□ 11.3
HMGN1-219ENST00000491183 PMS2P3Q13401 168 aa15.66■□□□□ 0.1
HMGN1-219ENST00000491183 SWI5Q1ZZU3 235 aa15.66■□□□□ 0.1
HMGN1-219ENST00000491183 C3orf36Q3SXR2 165 aa15.66■□□□□ 0.1
HMGN1-219ENST00000491183 ENTPD8Q5MY95 495 aa15.66■□□□□ 0.1
HMGN1-219ENST00000491183 CGB2Q6NT52 195 aa15.66■□□□□ 0.1
HMGN1-219ENST00000491183 PATL1Q86TB9 770 aaKnown RBP15.66■□□□□ 0.1
HMGN1-219ENST00000491183 UEVLDQ8IX04 471 aa15.66■□□□□ 0.1
HMGN1-219ENST00000491183 PIK3C3Q8NEB9 887 aa15.66■□□□□ 0.1
HMGN1-219ENST00000491183 RHNO1Q9BSD3 238 aa15.66■□□□□ 0.1
HMGN1-219ENST00000491183 KATNB1Q9BVA0 655 aa15.66■□□□□ 0.1
HMGN1-219ENST00000491183 ASPNQ9BXN1 380 aa15.66■□□□□ 0.1
HMGN1-219ENST00000491183 MED29Q9NX70 200 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms