RNA–Protein interactions for RNA: ENST00000489948.5

TRAIP-210, Transcript of TRAF interacting protein, humanhuman

TSL 4

Gene TRAIP, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-210ENST00000489948 FIGNL2A6NMB9 653 aa11.93□□□□□ -0.5
TRAIP-210ENST00000489948 TTLL8A6PVC2 850 aa11.93□□□□□ -0.5
TRAIP-210ENST00000489948 AHRRA9YTQ3 701 aa11.93□□□□□ -0.5
TRAIP-210ENST00000489948 NPIPA2E9PIF3 369 aa11.93□□□□□ -0.5
TRAIP-210ENST00000489948 NPIPA3F8WFD2 350 aa11.93□□□□□ -0.5
TRAIP-210ENST00000489948 MS4A18H0YCH9 400 aa11.93□□□□□ -0.5
TRAIP-210ENST00000489948 BLOC1S5-TXNDC5H3BN57 136 aa11.93□□□□□ -0.5
TRAIP-210ENST00000489948 TRAF3IP2O43734 574 aaPredicted RBP11.93□□□□□ -0.5
TRAIP-210ENST00000489948 SYNGR4O95473 234 aa11.93□□□□□ -0.5
TRAIP-210ENST00000489948 TXNDC12O95881 172 aa11.93□□□□□ -0.5
TRAIP-210ENST00000489948 HOXD4P09016 255 aaPredicted RBP11.93□□□□□ -0.5
TRAIP-210ENST00000489948 EPHA2P29317 976 aa11.93□□□□□ -0.5
TRAIP-210ENST00000489948 GRK5P34947 590 aa11.93□□□□□ -0.5
TRAIP-210ENST00000489948 GGT2P36268 569 aa11.93□□□□□ -0.5
TRAIP-210ENST00000489948 GIPRP48546 466 aa11.93□□□□□ -0.5
TRAIP-210ENST00000489948 SLC17A1Q14916 467 aa11.93□□□□□ -0.5
TRAIP-210ENST00000489948 C3AR1Q16581 482 aa11.93□□□□□ -0.5
TRAIP-210ENST00000489948 MS4A18Q3C1V0 323 aa11.93□□□□□ -0.5
TRAIP-210ENST00000489948 ACSF3Q4G176 576 aaPredicted RBP11.93□□□□□ -0.5
TRAIP-210ENST00000489948 EMC4Q5J8M3 183 aa11.93□□□□□ -0.5
TRAIP-210ENST00000489948 FAM205BPQ63HN1 556 aa11.93□□□□□ -0.5
TRAIP-210ENST00000489948 C12orf73Q69YU5 71 aa11.93□□□□□ -0.5
TRAIP-210ENST00000489948 GPR139Q6DWJ6 353 aa11.93□□□□□ -0.5
TRAIP-210ENST00000489948 NHLRC1Q6VVB1 395 aa11.93□□□□□ -0.5
TRAIP-210ENST00000489948 Q6ZPB1 254 aaPredicted RBP11.93□□□□□ -0.5
TRAIP-210ENST00000489948 USP51Q70EK9 711 aa11.93□□□□□ -0.5
TRAIP-210ENST00000489948 FCRLAQ7L513 359 aa11.93□□□□□ -0.5
TRAIP-210ENST00000489948 FAM122BQ7Z309 247 aa11.93□□□□□ -0.5
TRAIP-210ENST00000489948 ST6GALNAC3Q8NDV1 305 aa11.93□□□□□ -0.5
TRAIP-210ENST00000489948 ZNF555Q8NEP9 628 aa11.93□□□□□ -0.5
TRAIP-210ENST00000489948 FAM57AQ8TBR7 257 aa11.93□□□□□ -0.5
TRAIP-210ENST00000489948 ZNF845Q96IR2 970 aaPredicted RBP11.93□□□□□ -0.5
TRAIP-210ENST00000489948 ZNF570Q96NI8 536 aa11.93□□□□□ -0.5
TRAIP-210ENST00000489948 OXGR1Q96P68 337 aa11.93□□□□□ -0.5
TRAIP-210ENST00000489948 TSSK6Q9BXA6 273 aa11.93□□□□□ -0.5
TRAIP-210ENST00000489948 ANKRD60Q9BZ19 345 aa11.93□□□□□ -0.5
TRAIP-210ENST00000489948 RNF122Q9H9V4 155 aa11.93□□□□□ -0.5
TRAIP-210ENST00000489948 INIPQ9NRY2 104 aa11.93□□□□□ -0.5
TRAIP-210ENST00000489948 TNFRSF10DQ9UBN6 386 aa11.93□□□□□ -0.5
TRAIP-210ENST00000489948 ZNF835Q9Y2P0 537 aa11.93□□□□□ -0.5
TRAIP-210ENST00000489948 ARHGAP21Q5T5U3 1957 aa11.92□□□□□ -0.5
TRAIP-210ENST00000489948 CD8B2A6NJW9 211 aa11.92□□□□□ -0.5
TRAIP-210ENST00000489948 ZNF716A6NP11 495 aa11.92□□□□□ -0.5
TRAIP-210ENST00000489948 CLCA1A8K7I4 914 aa11.92□□□□□ -0.5
TRAIP-210ENST00000489948 RNF13O43567 381 aa11.92□□□□□ -0.5
TRAIP-210ENST00000489948 IGFBP1P08833 259 aaPredicted RBP11.92□□□□□ -0.5
TRAIP-210ENST00000489948 SDHAP31040 664 aa11.92□□□□□ -0.5
TRAIP-210ENST00000489948 RPL4P36578 427 aaKnown RBP11.92□□□□□ -0.5
TRAIP-210ENST00000489948 POLR2IP36954 125 aaKnown RBP11.92□□□□□ -0.5
TRAIP-210ENST00000489948 DAP3P51398 398 aaKnown RBP11.92□□□□□ -0.5
TRAIP-210ENST00000489948 SRYQ05066 204 aa11.92□□□□□ -0.5
TRAIP-210ENST00000489948 RBPJQ06330 500 aa11.92□□□□□ -0.5
TRAIP-210ENST00000489948 GINS1Q14691 196 aa11.92□□□□□ -0.5
TRAIP-210ENST00000489948 PON3Q15166 354 aa11.92□□□□□ -0.5
TRAIP-210ENST00000489948 RNPS1Q15287 305 aaKnown RBP11.92□□□□□ -0.5
TRAIP-210ENST00000489948 ZIK1Q3SY52 487 aaPredicted RBP11.92□□□□□ -0.5
TRAIP-210ENST00000489948 CHMP1BQ7LBR1 199 aa11.92□□□□□ -0.5
TRAIP-210ENST00000489948 HDDC2Q7Z4H3 204 aa11.92□□□□□ -0.5
TRAIP-210ENST00000489948 UEVLDQ8IX04 471 aa11.92□□□□□ -0.5
TRAIP-210ENST00000489948 OR9K2Q8NGE7 335 aa11.92□□□□□ -0.5
TRAIP-210ENST00000489948 OR4Q3Q8NH05 313 aa11.92□□□□□ -0.5
TRAIP-210ENST00000489948 CPT1CQ8TCG5 803 aa11.92□□□□□ -0.5
TRAIP-210ENST00000489948 SNX18Q96RF0 628 aa11.92□□□□□ -0.5
TRAIP-210ENST00000489948 TACO1Q9BSH4 297 aaKnown RBP11.92□□□□□ -0.5
TRAIP-210ENST00000489948 KATNB1Q9BVA0 655 aa11.92□□□□□ -0.5
TRAIP-210ENST00000489948 IFT27Q9BW83 186 aa11.92□□□□□ -0.5
TRAIP-210ENST00000489948 TEX12Q9BXU0 123 aa11.92□□□□□ -0.5
TRAIP-210ENST00000489948 POLDIP3Q9BY77 421 aaKnown RBP11.92□□□□□ -0.5
TRAIP-210ENST00000489948 ENKD1Q9H0I2 346 aa11.92□□□□□ -0.5
TRAIP-210ENST00000489948 TXNIPQ9H3M7 391 aa11.92□□□□□ -0.5
TRAIP-210ENST00000489948 CALHM2Q9HA72 323 aa11.92□□□□□ -0.5
TRAIP-210ENST00000489948 BCO1Q9HAY6 547 aa11.92□□□□□ -0.5
TRAIP-210ENST00000489948 CMC2Q9NRP2 79 aa11.92□□□□□ -0.5
TRAIP-210ENST00000489948 KLHL9Q9P2J3 617 aa11.92□□□□□ -0.5
TRAIP-210ENST00000489948 HSPE1-MOB4S4R3N1 261 aa11.92□□□□□ -0.5
TRAIP-210ENST00000489948 IGHV3-15A0A0B4J1V0 119 aa11.91□□□□□ -0.5
TRAIP-210ENST00000489948 A0A1W2PRG6 482 aa11.91□□□□□ -0.5
TRAIP-210ENST00000489948 SLC22A20A6NK97 555 aa11.91□□□□□ -0.5
TRAIP-210ENST00000489948 ZNF724A8MTY0 619 aa11.91□□□□□ -0.5
TRAIP-210ENST00000489948 CENPBD1B2RD01 187 aa11.91□□□□□ -0.5
TRAIP-210ENST00000489948 RAMP1O60894 148 aa11.91□□□□□ -0.5
TRAIP-210ENST00000489948 PPP1R3DO95685 299 aa11.91□□□□□ -0.5
TRAIP-210ENST00000489948 HMGN1P05114 100 aa11.91□□□□□ -0.5
TRAIP-210ENST00000489948 KLK2P20151 261 aa11.91□□□□□ -0.5
TRAIP-210ENST00000489948 POU1F1P28069 291 aa11.91□□□□□ -0.5
TRAIP-210ENST00000489948 CTXN1P60606 82 aa11.91□□□□□ -0.5
TRAIP-210ENST00000489948 CDC42P60953 191 aa11.91□□□□□ -0.5
TRAIP-210ENST00000489948 POU3F1Q03052 451 aaPredicted RBP11.91□□□□□ -0.5
TRAIP-210ENST00000489948 NFATC3Q12968 1075 aa11.91□□□□□ -0.5
TRAIP-210ENST00000489948 CLEC12AQ5QGZ9 265 aa11.91□□□□□ -0.5
TRAIP-210ENST00000489948 ZNF691Q5VV52 312 aa11.91□□□□□ -0.5
TRAIP-210ENST00000489948 NSUN5P2Q63ZY6 315 aa11.91□□□□□ -0.5
TRAIP-210ENST00000489948 TMEM225Q6GV28 225 aa11.91□□□□□ -0.5
TRAIP-210ENST00000489948 GFRALQ6UXV0 394 aa11.91□□□□□ -0.5
TRAIP-210ENST00000489948 ADCK1Q86TW2 530 aa11.91□□□□□ -0.5
TRAIP-210ENST00000489948 CD163Q86VB7 1156 aa11.91□□□□□ -0.5
TRAIP-210ENST00000489948 IQCF1Q8N6M8 205 aa11.91□□□□□ -0.5
TRAIP-210ENST00000489948 SETD9Q8NE22 299 aa11.91□□□□□ -0.5
TRAIP-210ENST00000489948 ZNF519Q8TB69 540 aa11.91□□□□□ -0.5
TRAIP-210ENST00000489948 FNDC9Q8TBE3 224 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms