RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 C7orf61Q8IZ16 206 aa4.38□□□□□ -1.71
SNRNP40-206ENST00000489853 CDK20Q8IZL9 346 aa4.38□□□□□ -1.71
SNRNP40-206ENST00000489853 CBARPQ8N350 705 aaPredicted RBP4.38□□□□□ -1.71
SNRNP40-206ENST00000489853 GPR137CQ8N3F9 429 aa4.38□□□□□ -1.71
SNRNP40-206ENST00000489853 ACBD7Q8N6N7 88 aa4.38□□□□□ -1.71
SNRNP40-206ENST00000489853 TOP6BLQ8N6T0 577 aa4.38□□□□□ -1.71
SNRNP40-206ENST00000489853 INO80EQ8NBZ0 244 aaPredicted RBP4.38□□□□□ -1.71
SNRNP40-206ENST00000489853 OR10D4PQ8NGN7 298 aa4.38□□□□□ -1.71
SNRNP40-206ENST00000489853 OR6N1Q8NGY5 312 aa4.38□□□□□ -1.71
SNRNP40-206ENST00000489853 ZNF671Q8TAW3 534 aa4.38□□□□□ -1.71
SNRNP40-206ENST00000489853 CCDC107Q8WV48 283 aa4.38□□□□□ -1.71
SNRNP40-206ENST00000489853 NUDCD2Q8WVJ2 157 aa4.38□□□□□ -1.71
SNRNP40-206ENST00000489853 HMGB4Q8WW32 186 aa4.38□□□□□ -1.71
SNRNP40-206ENST00000489853 RAB40AQ8WXH6 277 aa4.38□□□□□ -1.71
SNRNP40-206ENST00000489853 ING5Q8WYH8 240 aa4.38□□□□□ -1.71
SNRNP40-206ENST00000489853 CXorf40BQ96DE9 158 aa4.38□□□□□ -1.71
SNRNP40-206ENST00000489853 PIK3IP1Q96FE7 263 aa4.38□□□□□ -1.71
SNRNP40-206ENST00000489853 CPNE2Q96FN4 548 aaPredicted RBP4.38□□□□□ -1.71
SNRNP40-206ENST00000489853 S100A16Q96FQ6 103 aaKnown RBP4.38□□□□□ -1.71
SNRNP40-206ENST00000489853 CASD1Q96PB1 797 aa4.38□□□□□ -1.71
SNRNP40-206ENST00000489853 KLHL5Q96PQ7 755 aa4.38□□□□□ -1.71
SNRNP40-206ENST00000489853 FRG2BQ96QU4 278 aa4.38□□□□□ -1.71
SNRNP40-206ENST00000489853 OR5B2Q96R09 309 aa4.38□□□□□ -1.71
SNRNP40-206ENST00000489853 SEMA3CQ99985 751 aa4.38□□□□□ -1.71
SNRNP40-206ENST00000489853 SLC35A5Q9BS91 424 aa4.38□□□□□ -1.71
SNRNP40-206ENST00000489853 ZNF426Q9BUY5 554 aa4.38□□□□□ -1.71
SNRNP40-206ENST00000489853 EBPLQ9BY08 206 aa4.38□□□□□ -1.71
SNRNP40-206ENST00000489853 GLIS2Q9BZE0 524 aaPredicted RBP4.38□□□□□ -1.71
SNRNP40-206ENST00000489853 PRO1933Q9H354 126 aa4.38□□□□□ -1.71
SNRNP40-206ENST00000489853 C1orf198Q9H425 327 aa4.38□□□□□ -1.71
SNRNP40-206ENST00000489853 TMEM231Q9H6L2 316 aa4.38□□□□□ -1.71
SNRNP40-206ENST00000489853 LMAN1LQ9HAT1 526 aa4.38□□□□□ -1.71
SNRNP40-206ENST00000489853 ASCL3Q9NQ33 180 aa4.38□□□□□ -1.71
SNRNP40-206ENST00000489853 MEPEQ9NQ76 525 aaPredicted RBP4.38□□□□□ -1.71
SNRNP40-206ENST00000489853 SEMA4GQ9NTN9 838 aa4.38□□□□□ -1.71
SNRNP40-206ENST00000489853 TAS2R8Q9NYW2 309 aa4.38□□□□□ -1.71
SNRNP40-206ENST00000489853 H2AFY2Q9P0M6 372 aaPredicted RBP4.38□□□□□ -1.71
SNRNP40-206ENST00000489853 VPS29Q9UBQ0 182 aa4.38□□□□□ -1.71
SNRNP40-206ENST00000489853 KLK11Q9UBX7 282 aa4.38□□□□□ -1.71
SNRNP40-206ENST00000489853 CPA4Q9UI42 421 aa4.38□□□□□ -1.71
SNRNP40-206ENST00000489853 MOKQ9UQ07 419 aa4.38□□□□□ -1.71
SNRNP40-206ENST00000489853 A0A1B0GTI1 187 aa4.37□□□□□ -1.71
SNRNP40-206ENST00000489853 TMEM272A0A1B0GTI8 110 aa4.37□□□□□ -1.71
SNRNP40-206ENST00000489853 SMIM28A0A1B0GU29 152 aa4.37□□□□□ -1.71
SNRNP40-206ENST00000489853 hCG_1809904A0A1W2PP81 198 aa4.37□□□□□ -1.71
SNRNP40-206ENST00000489853 A0A1W2PPH5 198 aa4.37□□□□□ -1.71
SNRNP40-206ENST00000489853 A0A1W2PR64 198 aa4.37□□□□□ -1.71
SNRNP40-206ENST00000489853 A0A1W2PRV1 198 aa4.37□□□□□ -1.71
SNRNP40-206ENST00000489853 OR52A4PA6NMU1 304 aa4.37□□□□□ -1.71
SNRNP40-206ENST00000489853 M0QZ92 97 aa4.37□□□□□ -1.71
SNRNP40-206ENST00000489853 SULT2B1O00204 365 aa4.37□□□□□ -1.71
SNRNP40-206ENST00000489853 MAGEB4O15481 346 aaPredicted RBP4.37□□□□□ -1.71
SNRNP40-206ENST00000489853 DLEU1O43261 78 aa4.37□□□□□ -1.71
SNRNP40-206ENST00000489853 TSPAN3O60637 253 aa4.37□□□□□ -1.71
SNRNP40-206ENST00000489853 ARL6IP5O75915 188 aa4.37□□□□□ -1.71
SNRNP40-206ENST00000489853 ABLIM3O94929 683 aa4.37□□□□□ -1.71
SNRNP40-206ENST00000489853 VNN2O95498 520 aa4.37□□□□□ -1.71
SNRNP40-206ENST00000489853 PMP2P02689 132 aa4.37□□□□□ -1.71
SNRNP40-206ENST00000489853 LRG1P02750 347 aa4.37□□□□□ -1.71
SNRNP40-206ENST00000489853 MT-ND5P03915 603 aa4.37□□□□□ -1.71
SNRNP40-206ENST00000489853 GJB1P08034 283 aa4.37□□□□□ -1.71
SNRNP40-206ENST00000489853 MELTFP08582 738 aa4.37□□□□□ -1.71
SNRNP40-206ENST00000489853 FCGR3AP08637 254 aa4.37□□□□□ -1.71
SNRNP40-206ENST00000489853 ANXA5P08758 320 aa4.37□□□□□ -1.71
SNRNP40-206ENST00000489853 UCHL1P09936 223 aa4.37□□□□□ -1.71
SNRNP40-206ENST00000489853 OR4E1P0C645 316 aa4.37□□□□□ -1.71
SNRNP40-206ENST00000489853 METTL15P1P0C7V9 234 aa4.37□□□□□ -1.71
SNRNP40-206ENST00000489853 PIRTP0C851 137 aa4.37□□□□□ -1.71
SNRNP40-206ENST00000489853 ADH5P11766 374 aa4.37□□□□□ -1.71
SNRNP40-206ENST00000489853 EPCAMP16422 314 aa4.37□□□□□ -1.71
SNRNP40-206ENST00000489853 HLA-GP17693 338 aa4.37□□□□□ -1.71
SNRNP40-206ENST00000489853 EPORP19235 508 aa4.37□□□□□ -1.71
SNRNP40-206ENST00000489853 DLSTP36957 453 aa4.37□□□□□ -1.71
SNRNP40-206ENST00000489853 PTH2RP49190 550 aa4.37□□□□□ -1.71
SNRNP40-206ENST00000489853 P2RX1P51575 399 aa4.37□□□□□ -1.71
SNRNP40-206ENST00000489853 OAZ1P54368 228 aa4.37□□□□□ -1.71
SNRNP40-206ENST00000489853 DVL1P1P54792 670 aaPredicted RBP4.37□□□□□ -1.71
SNRNP40-206ENST00000489853 CACNG1Q06432 222 aa4.37□□□□□ -1.71
SNRNP40-206ENST00000489853 ACSM2AQ08AH3 577 aa4.37□□□□□ -1.71
SNRNP40-206ENST00000489853 PLA2G7Q13093 441 aa4.37□□□□□ -1.71
SNRNP40-206ENST00000489853 AIMP2Q13155 320 aaKnown RBP4.37□□□□□ -1.71
SNRNP40-206ENST00000489853 NFATC2Q13469 925 aa4.37□□□□□ -1.71
SNRNP40-206ENST00000489853 CBFBQ13951 182 aa4.37□□□□□ -1.71
SNRNP40-206ENST00000489853 CLINT1Q14677 625 aa4.37□□□□□ -1.71
SNRNP40-206ENST00000489853 ELAVL1Q15717 326 aaKnown RBP4.37□□□□□ -1.71
SNRNP40-206ENST00000489853 PNLIPRP3Q17RR3 467 aa4.37□□□□□ -1.71
SNRNP40-206ENST00000489853 DACT2Q5SW24 774 aa4.37□□□□□ -1.71
SNRNP40-206ENST00000489853 UBXN11Q5T124 520 aa4.37□□□□□ -1.71
SNRNP40-206ENST00000489853 FAM27D1Q5T7N8 215 aa4.37□□□□□ -1.71
SNRNP40-206ENST00000489853 ZDHHC20Q5W0Z9 365 aa4.37□□□□□ -1.71
SNRNP40-206ENST00000489853 ACSM2BQ68CK6 577 aa4.37□□□□□ -1.71
SNRNP40-206ENST00000489853 TPGS2Q68CL5 300 aa4.37□□□□□ -1.71
SNRNP40-206ENST00000489853 ARL9Q6T311 187 aa4.37□□□□□ -1.71
SNRNP40-206ENST00000489853 ESPNLQ6ZVH7 1005 aa4.37□□□□□ -1.71
SNRNP40-206ENST00000489853 HIST2H3AQ71DI3 136 aa4.37□□□□□ -1.71
SNRNP40-206ENST00000489853 DPPA4Q7L190 304 aa4.37□□□□□ -1.71
SNRNP40-206ENST00000489853 BHLHA9Q7RTU4 235 aa4.37□□□□□ -1.71
SNRNP40-206ENST00000489853 LRRC70Q7Z2Q7 622 aa4.37□□□□□ -1.71
SNRNP40-206ENST00000489853 NRROSQ86YC3 692 aa4.37□□□□□ -1.71
SNRNP40-206ENST00000489853 IZUMO1Q8IYV9 350 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms