RNA–Protein interactions for RNA: ENST00000489842.1

GTF3C5-210, Transcript of general transcription factor IIIC subunit 5, humanhuman

TSL 2

Gene GTF3C5, Length 696 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C5-210ENST00000489842 RETREG3Q86VR2 466 aa7.9□□□□□ -1.14
GTF3C5-210ENST00000489842 PTOV1Q86YD1 416 aa7.9□□□□□ -1.14
GTF3C5-210ENST00000489842 CDK20Q8IZL9 346 aa7.9□□□□□ -1.14
GTF3C5-210ENST00000489842 TMEM123Q8N131 208 aa7.9□□□□□ -1.14
GTF3C5-210ENST00000489842 SVOPLQ8N434 492 aa7.9□□□□□ -1.14
GTF3C5-210ENST00000489842 C17orf78Q8N4C9 275 aa7.9□□□□□ -1.14
GTF3C5-210ENST00000489842 GOLGA6L1Q8N7Z2 621 aa7.9□□□□□ -1.14
GTF3C5-210ENST00000489842 GPR32P1Q8NGA4 272 aa7.9□□□□□ -1.14
GTF3C5-210ENST00000489842 OR2M2Q96R28 347 aa7.9□□□□□ -1.14
GTF3C5-210ENST00000489842 KCNK17Q96T54 332 aa7.9□□□□□ -1.14
GTF3C5-210ENST00000489842 CPPED1Q9BRF8 314 aaPredicted RBP7.9□□□□□ -1.14
GTF3C5-210ENST00000489842 CRLF2Q9HC73 371 aa7.9□□□□□ -1.14
GTF3C5-210ENST00000489842 CA10Q9NS85 328 aa7.9□□□□□ -1.14
GTF3C5-210ENST00000489842 RPS6KB2Q9UBS0 482 aa7.9□□□□□ -1.14
GTF3C5-210ENST00000489842 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.9□□□□□ -1.14
GTF3C5-210ENST00000489842 FZR1Q9UM11 496 aa7.9□□□□□ -1.14
GTF3C5-210ENST00000489842 RASD1Q9Y272 281 aa7.9□□□□□ -1.14
GTF3C5-210ENST00000489842 COL6A5A8TX70 2615 aa7.9□□□□□ -1.15
GTF3C5-210ENST00000489842 MXRA5Q9NR99 2828 aa7.89□□□□□ -1.15
GTF3C5-210ENST00000489842 ATRQ13535 2644 aa7.89□□□□□ -1.15
GTF3C5-210ENST00000489842 VWC2LB2RUY7 222 aa7.89□□□□□ -1.15
GTF3C5-210ENST00000489842 C11orf98E9PRG8 122 aa7.89□□□□□ -1.15
GTF3C5-210ENST00000489842 TLX2O43763 284 aaPredicted RBP7.89□□□□□ -1.15
GTF3C5-210ENST00000489842 LYPD3O95274 346 aa7.89□□□□□ -1.15
GTF3C5-210ENST00000489842 WNT11O96014 354 aa7.89□□□□□ -1.15
GTF3C5-210ENST00000489842 F12P00748 615 aaPredicted RBP7.89□□□□□ -1.15
GTF3C5-210ENST00000489842 IGLV1-44P01699 117 aa7.89□□□□□ -1.15
GTF3C5-210ENST00000489842 TNFRSF1BP20333 461 aa7.89□□□□□ -1.15
GTF3C5-210ENST00000489842 IGFBP5P24593 272 aa7.89□□□□□ -1.15
GTF3C5-210ENST00000489842 GTF2E2P29084 291 aaKnown RBP7.89□□□□□ -1.15
GTF3C5-210ENST00000489842 SERPINF1P36955 418 aa7.89□□□□□ -1.15
GTF3C5-210ENST00000489842 CAPZA2P47755 286 aa7.89□□□□□ -1.15
GTF3C5-210ENST00000489842 CDH12P55289 794 aa7.89□□□□□ -1.15
GTF3C5-210ENST00000489842 MTPNP58546 118 aa7.89□□□□□ -1.15
GTF3C5-210ENST00000489842 STX1BP61266 288 aa7.89□□□□□ -1.15
GTF3C5-210ENST00000489842 TXNL4AP83876 142 aaKnown RBP7.89□□□□□ -1.15
GTF3C5-210ENST00000489842 TGFBR3Q03167 851 aa7.89□□□□□ -1.15
GTF3C5-210ENST00000489842 LOXL1Q08397 574 aaPredicted RBP7.89□□□□□ -1.15
GTF3C5-210ENST00000489842 HNRNPA0Q13151 305 aaKnown RBP7.89□□□□□ -1.15
GTF3C5-210ENST00000489842 C1DQ13901 141 aaKnown RBP7.89□□□□□ -1.15
GTF3C5-210ENST00000489842 TRIP10Q15642 601 aa7.89□□□□□ -1.15
GTF3C5-210ENST00000489842 DUSP7Q16829 419 aa7.89□□□□□ -1.15
GTF3C5-210ENST00000489842 AGBL2Q5U5Z8 902 aa7.89□□□□□ -1.15
GTF3C5-210ENST00000489842 DHRS4L2Q6PKH6 230 aa7.89□□□□□ -1.15
GTF3C5-210ENST00000489842 NHLRC1Q6VVB1 395 aa7.89□□□□□ -1.15
GTF3C5-210ENST00000489842 SLC46A3Q7Z3Q1 461 aa7.89□□□□□ -1.15
GTF3C5-210ENST00000489842 LRP11Q86VZ4 500 aa7.89□□□□□ -1.15
GTF3C5-210ENST00000489842 CARM1Q86X55 608 aa7.89□□□□□ -1.15
GTF3C5-210ENST00000489842 LRRC17Q8N6Y2 441 aa7.89□□□□□ -1.15
GTF3C5-210ENST00000489842 VANGL1Q8TAA9 524 aaPredicted RBP7.89□□□□□ -1.15
GTF3C5-210ENST00000489842 LRRC8CQ8TDW0 803 aa7.89□□□□□ -1.15
GTF3C5-210ENST00000489842 MSI2Q96DH6 328 aaKnown RBP7.89□□□□□ -1.15
GTF3C5-210ENST00000489842 C7orf26Q96N11 449 aa7.89□□□□□ -1.15
GTF3C5-210ENST00000489842 OXGR1Q96P68 337 aa7.89□□□□□ -1.15
GTF3C5-210ENST00000489842 REPIN1Q9BWE0 567 aaKnown RBP7.89□□□□□ -1.15
GTF3C5-210ENST00000489842 LINC00470Q9BZP3 86 aa7.89□□□□□ -1.15
GTF3C5-210ENST00000489842 TPK1Q9H3S4 243 aa7.89□□□□□ -1.15
GTF3C5-210ENST00000489842 ZNF224Q9NZL3 707 aa7.89□□□□□ -1.15
GTF3C5-210ENST00000489842 CRNNQ9UBG3 495 aaPredicted RBP7.89□□□□□ -1.15
GTF3C5-210ENST00000489842 TRAV36DV7A0A075B6V5 113 aa7.88□□□□□ -1.15
GTF3C5-210ENST00000489842 A0A087WUJ7 227 aa7.88□□□□□ -1.15
GTF3C5-210ENST00000489842 ARPC4-TTLL3A0A0A6YYG9 625 aa7.88□□□□□ -1.15
GTF3C5-210ENST00000489842 IGHV2OR16-5A0A0B4J2B6 119 aa7.88□□□□□ -1.15
GTF3C5-210ENST00000489842 TMEM247A6NEH6 219 aa7.88□□□□□ -1.15
GTF3C5-210ENST00000489842 OR6C65A6NJZ3 312 aa7.88□□□□□ -1.15
GTF3C5-210ENST00000489842 CPSF4LA6NMK7 179 aaKnown RBP7.88□□□□□ -1.15
GTF3C5-210ENST00000489842 hCG_2039718K7EN88 272 aa7.88□□□□□ -1.15
GTF3C5-210ENST00000489842 KPNA4O00629 521 aaPredicted RBP7.88□□□□□ -1.15
GTF3C5-210ENST00000489842 AIM2O14862 343 aa7.88□□□□□ -1.15
GTF3C5-210ENST00000489842 PHF1O43189 567 aaPredicted RBP7.88□□□□□ -1.15
GTF3C5-210ENST00000489842 SHOX2O60902 331 aaPredicted RBP7.88□□□□□ -1.15
GTF3C5-210ENST00000489842 SLC43A1O75387 559 aa7.88□□□□□ -1.15
GTF3C5-210ENST00000489842 MFN2O95140 757 aa7.88□□□□□ -1.15
GTF3C5-210ENST00000489842 CRYAAP02489 173 aa7.88□□□□□ -1.15
GTF3C5-210ENST00000489842 ETS2P15036 469 aa7.88□□□□□ -1.15
GTF3C5-210ENST00000489842 NQO1P15559 274 aaKnown RBP7.88□□□□□ -1.15
GTF3C5-210ENST00000489842 TCN1P20061 433 aaPredicted RBP7.88□□□□□ -1.15
GTF3C5-210ENST00000489842 FUT4P22083 530 aa7.88□□□□□ -1.15
GTF3C5-210ENST00000489842 USF1P22415 310 aaPredicted RBP7.88□□□□□ -1.15
GTF3C5-210ENST00000489842 PRKAR1BP31321 381 aa7.88□□□□□ -1.15
GTF3C5-210ENST00000489842 RBMXP38159 391 aaKnown RBP7.88□□□□□ -1.15
GTF3C5-210ENST00000489842 NR4A2P43354 598 aa7.88□□□□□ -1.15
GTF3C5-210ENST00000489842 PDLIM4P50479 330 aa7.88□□□□□ -1.15
GTF3C5-210ENST00000489842 MAP2K6P52564 334 aa7.88□□□□□ -1.15
GTF3C5-210ENST00000489842 RGS8P57771 180 aaPredicted RBP7.88□□□□□ -1.15
GTF3C5-210ENST00000489842 LSM11P83369 360 aaKnown RBP eCLIP7.88□□□□□ -1.152e-8■■□□□ 13.4
GTF3C5-210ENST00000489842 VLDLRP98155 873 aa7.88□□□□□ -1.15
GTF3C5-210ENST00000489842 POU3F1Q03052 451 aaPredicted RBP7.88□□□□□ -1.15
GTF3C5-210ENST00000489842 CHRNB3Q05901 458 aa7.88□□□□□ -1.15
GTF3C5-210ENST00000489842 FADDQ13158 208 aa7.88□□□□□ -1.15
GTF3C5-210ENST00000489842 MELKQ14680 651 aa7.88□□□□□ -1.15
GTF3C5-210ENST00000489842 MAD2L1BPQ15013 274 aaPredicted RBP7.88□□□□□ -1.15
GTF3C5-210ENST00000489842 CHRFAM7AQ494W8 412 aa7.88□□□□□ -1.15
GTF3C5-210ENST00000489842 RUNDC3AQ59EK9 446 aa7.88□□□□□ -1.15
GTF3C5-210ENST00000489842 FAM69AQ5T7M9 428 aa7.88□□□□□ -1.15
GTF3C5-210ENST00000489842 REEP3Q6NUK4 255 aa7.88□□□□□ -1.15
GTF3C5-210ENST00000489842 C6orf89Q6UWU4 347 aa7.88□□□□□ -1.15
GTF3C5-210ENST00000489842 H1FNTQ75WM6 255 aaPredicted RBP7.88□□□□□ -1.15
GTF3C5-210ENST00000489842 SPATA21Q7Z572 469 aa7.88□□□□□ -1.15
GTF3C5-210ENST00000489842 GPR137CQ8N3F9 429 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms