RNA–Protein interactions for RNA: ENST00000489403.1

CPSF3-204, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 5

Gene CPSF3, Length 688 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-204ENST00000489403 CACYBPQ9HB71 228 aaKnown RBP10.73□□□□□ -0.69
CPSF3-204ENST00000489403 CRLF2Q9HC73 371 aa10.73□□□□□ -0.69
CPSF3-204ENST00000489403 GPR35Q9HC97 309 aa10.73□□□□□ -0.69
CPSF3-204ENST00000489403 THUMPD1Q9NXG2 353 aaKnown RBP10.73□□□□□ -0.69
CPSF3-204ENST00000489403 ZIM2Q9NZV7 527 aa10.73□□□□□ -0.69
CPSF3-204ENST00000489403 FBXO9Q9UK97 447 aaPredicted RBP10.73□□□□□ -0.69
CPSF3-204ENST00000489403 TMEM247A6NEH6 219 aa10.72□□□□□ -0.69
CPSF3-204ENST00000489403 M0R082 166 aa10.72□□□□□ -0.69
CPSF3-204ENST00000489403 AIM2O14862 343 aa10.72□□□□□ -0.69
CPSF3-204ENST00000489403 TRAF3IP2O43734 574 aaPredicted RBP10.72□□□□□ -0.69
CPSF3-204ENST00000489403 LILRA1O75019 489 aa10.72□□□□□ -0.69
CPSF3-204ENST00000489403 SEC14L2O76054 403 aa10.72□□□□□ -0.69
CPSF3-204ENST00000489403 NPR2P20594 1047 aa10.72□□□□□ -0.69
CPSF3-204ENST00000489403 ARR3P36575 388 aa10.72□□□□□ -0.69
CPSF3-204ENST00000489403 SQLEQ14534 574 aa10.72□□□□□ -0.69
CPSF3-204ENST00000489403 RGNQ15493 299 aa10.72□□□□□ -0.69
CPSF3-204ENST00000489403 PHYHD1Q5SRE7 291 aa10.72□□□□□ -0.69
CPSF3-204ENST00000489403 C6orf10Q5SRN2 563 aa10.72□□□□□ -0.69
CPSF3-204ENST00000489403 FAM69AQ5T7M9 428 aa10.72□□□□□ -0.69
CPSF3-204ENST00000489403 MAVSQ7Z434 540 aa10.72□□□□□ -0.69
CPSF3-204ENST00000489403 MDP1Q86V88 176 aa10.72□□□□□ -0.69
CPSF3-204ENST00000489403 CDK20Q8IZL9 346 aa10.72□□□□□ -0.69
CPSF3-204ENST00000489403 TMEM123Q8N131 208 aa10.72□□□□□ -0.69
CPSF3-204ENST00000489403 GPR137CQ8N3F9 429 aa10.72□□□□□ -0.69
CPSF3-204ENST00000489403 BBS10Q8TAM1 723 aa10.72□□□□□ -0.69
CPSF3-204ENST00000489403 ZNF417Q8TAU3 575 aa10.72□□□□□ -0.69
CPSF3-204ENST00000489403 MGARPQ8TDB4 240 aa10.72□□□□□ -0.69
CPSF3-204ENST00000489403 NEU4Q8WWR8 484 aaPredicted RBP10.72□□□□□ -0.69
CPSF3-204ENST00000489403 GTF2H4Q92759 462 aa10.72□□□□□ -0.69
CPSF3-204ENST00000489403 MAL2Q969L2 176 aa10.72□□□□□ -0.69
CPSF3-204ENST00000489403 TAAR8Q969N4 342 aa10.72□□□□□ -0.69
CPSF3-204ENST00000489403 SLC35B4Q969S0 331 aa10.72□□□□□ -0.69
CPSF3-204ENST00000489403 ANKRD27Q96NW4 1050 aa10.72□□□□□ -0.69
CPSF3-204ENST00000489403 OR2M2Q96R28 347 aa10.72□□□□□ -0.69
CPSF3-204ENST00000489403 ZNF587Q96SQ5 575 aaPredicted RBP10.72□□□□□ -0.69
CPSF3-204ENST00000489403 PARD6BQ9BYG5 372 aa10.72□□□□□ -0.69
CPSF3-204ENST00000489403 PAIP1Q9H074 479 aaKnown RBP10.72□□□□□ -0.69
CPSF3-204ENST00000489403 C12orf10Q9HB07 376 aa10.72□□□□□ -0.69
CPSF3-204ENST00000489403 NOX3Q9HBY0 568 aa10.72□□□□□ -0.69
CPSF3-204ENST00000489403 BCL2L10Q9HD36 194 aa10.72□□□□□ -0.69
CPSF3-204ENST00000489403 A4GALTQ9NPC4 353 aa10.72□□□□□ -0.69
CPSF3-204ENST00000489403 SDR39U1Q9NRG7 319 aaPredicted RBP10.72□□□□□ -0.69
CPSF3-204ENST00000489403 PCDHB14Q9Y5E9 798 aa10.72□□□□□ -0.69
CPSF3-204ENST00000489403 IGKV1D-42A0A075B6H8 117 aa10.71□□□□□ -0.69
CPSF3-204ENST00000489403 TMEM120BA0PK00 339 aa10.71□□□□□ -0.69
CPSF3-204ENST00000489403 SH3PXD2BA1X283 911 aa10.71□□□□□ -0.69
CPSF3-204ENST00000489403 ZNF99A8MXY4 864 aaPredicted RBP10.71□□□□□ -0.69
CPSF3-204ENST00000489403 SLCO1B7G3V0H7 640 aa10.71□□□□□ -0.69
CPSF3-204ENST00000489403 OR2T1O43869 369 aa10.71□□□□□ -0.69
CPSF3-204ENST00000489403 C8BP07358 591 aa10.71□□□□□ -0.69
CPSF3-204ENST00000489403 ERCC1P07992 297 aaPredicted RBP10.71□□□□□ -0.69
CPSF3-204ENST00000489403 BMP2P12643 396 aa10.71□□□□□ -0.69
CPSF3-204ENST00000489403 HOXB9P17482 250 aaPredicted RBP10.71□□□□□ -0.69
CPSF3-204ENST00000489403 CBLP22681 906 aa10.71□□□□□ -0.69
CPSF3-204ENST00000489403 APEX1P27695 318 aaKnown RBP10.71□□□□□ -0.69
CPSF3-204ENST00000489403 HTR2AP28223 471 aa10.71□□□□□ -0.69
CPSF3-204ENST00000489403 GRPRP30550 384 aa10.71□□□□□ -0.69
CPSF3-204ENST00000489403 POLR2JP52435 117 aaKnown RBP10.71□□□□□ -0.69
CPSF3-204ENST00000489403 CHN2P52757 468 aa10.71□□□□□ -0.69
CPSF3-204ENST00000489403 SNTB2Q13425 540 aaKnown RBP10.71□□□□□ -0.69
CPSF3-204ENST00000489403 RIN1Q13671 783 aa10.71□□□□□ -0.69
CPSF3-204ENST00000489403 C1DQ13901 141 aaKnown RBP10.71□□□□□ -0.69
CPSF3-204ENST00000489403 TRIP10Q15642 601 aa10.71□□□□□ -0.69
CPSF3-204ENST00000489403 ADRM1Q16186 407 aa10.71□□□□□ -0.69
CPSF3-204ENST00000489403 KRT80Q6KB66 452 aa10.71□□□□□ -0.69
CPSF3-204ENST00000489403 SLC2A7Q6PXP3 512 aa10.71□□□□□ -0.69
CPSF3-204ENST00000489403 COMTD1Q86VU5 262 aa10.71□□□□□ -0.69
CPSF3-204ENST00000489403 ZNF786Q8N393 782 aa10.71□□□□□ -0.69
CPSF3-204ENST00000489403 LSMEM1Q8N8F7 131 aa10.71□□□□□ -0.69
CPSF3-204ENST00000489403 PIK3C3Q8NEB9 887 aa10.71□□□□□ -0.69
CPSF3-204ENST00000489403 CKAP2Q8WWK9 683 aa10.71□□□□□ -0.69
CPSF3-204ENST00000489403 SLC38A4Q969I6 547 aa10.71□□□□□ -0.69
CPSF3-204ENST00000489403 OR52B2Q96RD2 323 aa10.71□□□□□ -0.69
CPSF3-204ENST00000489403 TPK1Q9H3S4 243 aa10.71□□□□□ -0.69
CPSF3-204ENST00000489403 DYNLRB1Q9NP97 96 aa10.71□□□□□ -0.69
CPSF3-204ENST00000489403 RPS6KB2Q9UBS0 482 aa10.71□□□□□ -0.69
CPSF3-204ENST00000489403 A0A1B0GWA3 101 aa10.7□□□□□ -0.7
CPSF3-204ENST00000489403 VSTM5A8MXK1 200 aa10.7□□□□□ -0.7
CPSF3-204ENST00000489403 M0R3G1 203 aa10.7□□□□□ -0.7
CPSF3-204ENST00000489403 CLIC1O00299 241 aa10.7□□□□□ -0.7
CPSF3-204ENST00000489403 UBDO15205 165 aa10.7□□□□□ -0.7
CPSF3-204ENST00000489403 AKAP8O43823 692 aaKnown RBP10.7□□□□□ -0.7
CPSF3-204ENST00000489403 HLA-DOBP13765 273 aa10.7□□□□□ -0.7
CPSF3-204ENST00000489403 PRKAR1BP31321 381 aa10.7□□□□□ -0.7
CPSF3-204ENST00000489403 CAPZA2P47755 286 aa10.7□□□□□ -0.7
CPSF3-204ENST00000489403 CDH15P55291 814 aa10.7□□□□□ -0.7
CPSF3-204ENST00000489403 IL1RL1Q01638 556 aa10.7□□□□□ -0.7
CPSF3-204ENST00000489403 FADDQ13158 208 aa10.7□□□□□ -0.7
CPSF3-204ENST00000489403 DAG1Q14118 895 aa10.7□□□□□ -0.7
CPSF3-204ENST00000489403 MSMPQ1L6U9 139 aa10.7□□□□□ -0.7
CPSF3-204ENST00000489403 ALG10BQ5I7T1 473 aa10.7□□□□□ -0.7
CPSF3-204ENST00000489403 C5orf46Q6UWT4 87 aa10.7□□□□□ -0.7
CPSF3-204ENST00000489403 H1FNTQ75WM6 255 aaPredicted RBP10.7□□□□□ -0.7
CPSF3-204ENST00000489403 RFLNBQ8N5W9 214 aa10.7□□□□□ -0.7
CPSF3-204ENST00000489403 LINC01356Q8N9X3 169 aa10.7□□□□□ -0.7
CPSF3-204ENST00000489403 ADPRHL1Q8NDY3 354 aa10.7□□□□□ -0.7
CPSF3-204ENST00000489403 UBASH3BQ8TF42 649 aa10.7□□□□□ -0.7
CPSF3-204ENST00000489403 HPS1Q92902 700 aa10.7□□□□□ -0.7
CPSF3-204ENST00000489403 SNX18Q96RF0 628 aa10.7□□□□□ -0.7
CPSF3-204ENST00000489403 B3GNT2Q9NY97 397 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms