RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 FXYD6P3P58550 94 aa10.98□□□□□ -0.65
TRAIP-209ENST00000488860 CTXN1P60606 82 aa10.98□□□□□ -0.65
TRAIP-209ENST00000488860 PRPS1P60891 318 aa10.98□□□□□ -0.65
TRAIP-209ENST00000488860 SIRPAP78324 504 aa10.98□□□□□ -0.65
TRAIP-209ENST00000488860 H3F3AP84243 136 aa10.98□□□□□ -0.65
TRAIP-209ENST00000488860 COX10Q12887 443 aa10.98□□□□□ -0.65
TRAIP-209ENST00000488860 RNPS1Q15287 305 aaKnown RBP10.98□□□□□ -0.65
TRAIP-209ENST00000488860 MS4A18Q3C1V0 323 aa10.98□□□□□ -0.65
TRAIP-209ENST00000488860 ZIK1Q3SY52 487 aaPredicted RBP10.98□□□□□ -0.65
TRAIP-209ENST00000488860 KDM4DQ6B0I6 523 aa10.98□□□□□ -0.65
TRAIP-209ENST00000488860 RTL6Q6ICC9 239 aa10.98□□□□□ -0.65
TRAIP-209ENST00000488860 RPL13AP3Q6NVV1 102 aa10.98□□□□□ -0.65
TRAIP-209ENST00000488860 THSD4Q6ZMP0 1018 aa10.98□□□□□ -0.65
TRAIP-209ENST00000488860 ADGRE4PQ86SQ3 457 aa10.98□□□□□ -0.65
TRAIP-209ENST00000488860 SLC43A2Q8N370 569 aa10.98□□□□□ -0.65
TRAIP-209ENST00000488860 GALNT11Q8NCW6 608 aa10.98□□□□□ -0.65
TRAIP-209ENST00000488860 OR9K2Q8NGE7 335 aa10.98□□□□□ -0.65
TRAIP-209ENST00000488860 OR8D4Q8NGM9 314 aa10.98□□□□□ -0.65
TRAIP-209ENST00000488860 NRG4Q8WWG1 115 aa10.98□□□□□ -0.65
TRAIP-209ENST00000488860 WNT2BQ93097 391 aa10.98□□□□□ -0.65
TRAIP-209ENST00000488860 ZNF775Q96BV0 537 aaPredicted RBP10.98□□□□□ -0.65
TRAIP-209ENST00000488860 OXGR1Q96P68 337 aa10.98□□□□□ -0.65
TRAIP-209ENST00000488860 KATNB1Q9BVA0 655 aa10.98□□□□□ -0.65
TRAIP-209ENST00000488860 IFT27Q9BW83 186 aa10.98□□□□□ -0.65
TRAIP-209ENST00000488860 POLDIP3Q9BY77 421 aaKnown RBP10.98□□□□□ -0.65
TRAIP-209ENST00000488860 PLA2G12AQ9BZM1 189 aa10.98□□□□□ -0.65
TRAIP-209ENST00000488860 TAS2R5Q9NYW4 299 aa10.98□□□□□ -0.65
TRAIP-209ENST00000488860 USE1Q9NZ43 259 aa10.98□□□□□ -0.65
TRAIP-209ENST00000488860 EMC3Q9P0I2 261 aa10.98□□□□□ -0.65
TRAIP-209ENST00000488860 B3GAT1Q9P2W7 334 aa10.98□□□□□ -0.65
TRAIP-209ENST00000488860 TMEFF2Q9UIK5 374 aaPredicted RBP10.98□□□□□ -0.65
TRAIP-209ENST00000488860 ESPL1Q14674 2120 aa10.97□□□□□ -0.65
TRAIP-209ENST00000488860 SMG1Q96Q15 3661 aaKnown RBP10.97□□□□□ -0.65
TRAIP-209ENST00000488860 A0A1W2PRG6 482 aa10.97□□□□□ -0.65
TRAIP-209ENST00000488860 MBD3L4A6NDZ8 208 aaPredicted RBP10.97□□□□□ -0.65
TRAIP-209ENST00000488860 MBD3L3A6NE82 208 aaPredicted RBP10.97□□□□□ -0.65
TRAIP-209ENST00000488860 MBD3L5A6NJ08 208 aaPredicted RBP10.97□□□□□ -0.65
TRAIP-209ENST00000488860 ZNF716A6NP11 495 aa10.97□□□□□ -0.65
TRAIP-209ENST00000488860 CCL21O00585 134 aa10.97□□□□□ -0.65
TRAIP-209ENST00000488860 VAMP5O95183 116 aa10.97□□□□□ -0.65
TRAIP-209ENST00000488860 HOXD4P09016 255 aaPredicted RBP10.97□□□□□ -0.65
TRAIP-209ENST00000488860 ZNF26P17031 533 aaPredicted RBP10.97□□□□□ -0.65
TRAIP-209ENST00000488860 CDH2P19022 906 aaPredicted RBP10.97□□□□□ -0.65
TRAIP-209ENST00000488860 CA7P43166 264 aa10.97□□□□□ -0.65
TRAIP-209ENST00000488860 RAD23AP54725 363 aa10.97□□□□□ -0.65
TRAIP-209ENST00000488860 ERVK-25P63136 954 aa10.97□□□□□ -0.65
TRAIP-209ENST00000488860 ZP4Q12836 540 aa10.97□□□□□ -0.65
TRAIP-209ENST00000488860 FHL1Q13642 323 aa10.97□□□□□ -0.65
TRAIP-209ENST00000488860 SLC17A1Q14916 467 aa10.97□□□□□ -0.65
TRAIP-209ENST00000488860 SNCBQ16143 134 aa10.97□□□□□ -0.65
TRAIP-209ENST00000488860 ANKDD1AQ495B1 522 aa10.97□□□□□ -0.65
TRAIP-209ENST00000488860 GTF2IRD2BQ6EKJ0 949 aa10.97□□□□□ -0.65
TRAIP-209ENST00000488860 CD300LDQ6UXZ3 194 aa10.97□□□□□ -0.65
TRAIP-209ENST00000488860 SEM1Q6ZVN7 128 aa10.97□□□□□ -0.65
TRAIP-209ENST00000488860 GTF2IRD2Q86UP8 949 aa10.97□□□□□ -0.65
TRAIP-209ENST00000488860 TUSC5Q8IXB3 177 aa10.97□□□□□ -0.65
TRAIP-209ENST00000488860 IQCF1Q8N6M8 205 aa10.97□□□□□ -0.65
TRAIP-209ENST00000488860 CNEP1R1Q8N9A8 125 aa10.97□□□□□ -0.65
TRAIP-209ENST00000488860 ANKK1Q8NFD2 765 aa10.97□□□□□ -0.65
TRAIP-209ENST00000488860 MBD3L2Q8NHZ7 208 aaPredicted RBP10.97□□□□□ -0.65
TRAIP-209ENST00000488860 PRR7Q8TB68 274 aa10.97□□□□□ -0.65
TRAIP-209ENST00000488860 INTS12Q96CB8 462 aaKnown RBP10.97□□□□□ -0.65
TRAIP-209ENST00000488860 ZNF570Q96NI8 536 aa10.97□□□□□ -0.65
TRAIP-209ENST00000488860 TM9SF2Q99805 663 aa10.97□□□□□ -0.65
TRAIP-209ENST00000488860 TTYH2Q9BSA4 534 aa10.97□□□□□ -0.65
TRAIP-209ENST00000488860 TSSK6Q9BXA6 273 aa10.97□□□□□ -0.65
TRAIP-209ENST00000488860 VCX3BQ9H321 246 aa10.97□□□□□ -0.65
TRAIP-209ENST00000488860 RNF122Q9H9V4 155 aa10.97□□□□□ -0.65
TRAIP-209ENST00000488860 MED29Q9NX70 200 aa10.97□□□□□ -0.65
TRAIP-209ENST00000488860 REV1Q9UBZ9 1251 aa10.97□□□□□ -0.65
TRAIP-209ENST00000488860 NOX1Q9Y5S8 564 aa10.97□□□□□ -0.65
TRAIP-209ENST00000488860 INTS1Q8N201 2190 aaKnown RBP10.97□□□□□ -0.65
TRAIP-209ENST00000488860 FAM208BQ5VWN6 2430 aa10.96□□□□□ -0.65
TRAIP-209ENST00000488860 TEX13CA0A0J9YWL9 993 aa10.96□□□□□ -0.65
TRAIP-209ENST00000488860 TRAF3IP2O43734 574 aaPredicted RBP10.96□□□□□ -0.65
TRAIP-209ENST00000488860 PTP4A3O75365 173 aa10.96□□□□□ -0.65
TRAIP-209ENST00000488860 IL2RAP01589 272 aa10.96□□□□□ -0.65
TRAIP-209ENST00000488860 TP53P04637 393 aaPredicted RBP10.96□□□□□ -0.65
TRAIP-209ENST00000488860 TSPAN19P0C672 248 aa10.96□□□□□ -0.65
TRAIP-209ENST00000488860 TMIGD3P0DMS9 266 aaPredicted RBP10.96□□□□□ -0.65
TRAIP-209ENST00000488860 GLI4P10075 376 aa10.96□□□□□ -0.65
TRAIP-209ENST00000488860 IFNGR1P15260 489 aa10.96□□□□□ -0.65
TRAIP-209ENST00000488860 AGTR1P30556 359 aa10.96□□□□□ -0.65
TRAIP-209ENST00000488860 PTDSS1P48651 473 aaKnown RBP10.96□□□□□ -0.65
TRAIP-209ENST00000488860 DAP3P51398 398 aaKnown RBP10.96□□□□□ -0.65
TRAIP-209ENST00000488860 RPS6KA3P51812 740 aa10.96□□□□□ -0.65
TRAIP-209ENST00000488860 BIDP55957 195 aa10.96□□□□□ -0.65
TRAIP-209ENST00000488860 CLDN17P56750 224 aa10.96□□□□□ -0.65
TRAIP-209ENST00000488860 PMPCAQ10713 525 aa10.96□□□□□ -0.65
TRAIP-209ENST00000488860 POU4F3Q15319 338 aa10.96□□□□□ -0.65
TRAIP-209ENST00000488860 EIF2S3LQ2VIR3 472 aaKnown RBP10.96□□□□□ -0.65
TRAIP-209ENST00000488860 RFX4Q33E94 735 aa10.96□□□□□ -0.65
TRAIP-209ENST00000488860 TMEM201Q5SNT2 666 aa10.96□□□□□ -0.65
TRAIP-209ENST00000488860 CARD17Q5XLA6 110 aa10.96□□□□□ -0.65
TRAIP-209ENST00000488860 OR2A2Q6IF42 318 aa10.96□□□□□ -0.65
TRAIP-209ENST00000488860 CASP12Q6UXS9 341 aa10.96□□□□□ -0.65
TRAIP-209ENST00000488860 CREB3L2Q70SY1 520 aa10.96□□□□□ -0.65
TRAIP-209ENST00000488860 SLC35D2Q76EJ3 337 aa10.96□□□□□ -0.65
TRAIP-209ENST00000488860 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.96□□□□□ -0.65
TRAIP-209ENST00000488860 PXKQ7Z7A4 578 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms