RNA–Protein interactions for RNA: ENST00000488171.5

CD55-209, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 3

Gene CD55, Length 1,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-209ENST00000488171 ZNF837Q96EG3 531 aaPredicted RBP16.83■□□□□ 0.28
CD55-209ENST00000488171 SLC41A3Q96GZ6 507 aa16.83■□□□□ 0.28
CD55-209ENST00000488171 ANKRD27Q96NW4 1050 aa16.83■□□□□ 0.28
CD55-209ENST00000488171 OR2M2Q96R28 347 aa16.83■□□□□ 0.28
CD55-209ENST00000488171 KATNB1Q9BVA0 655 aa16.83■□□□□ 0.28
CD55-209ENST00000488171 TMEM27Q9HBJ8 222 aa16.83■□□□□ 0.28
CD55-209ENST00000488171 ANGPT4Q9Y264 503 aa16.83■□□□□ 0.28
CD55-209ENST00000488171 NDUFAF1Q9Y375 327 aa16.83■□□□□ 0.28
CD55-209ENST00000488171 MS4A18H0YCH9 400 aa16.82■□□□□ 0.28
CD55-209ENST00000488171 SLC43A1O75387 559 aa16.82■□□□□ 0.28
CD55-209ENST00000488171 HPRP00739 348 aa16.82■□□□□ 0.28
CD55-209ENST00000488171 IGLV1-44P01699 117 aa16.82■□□□□ 0.28
CD55-209ENST00000488171 BGLAPP02818 100 aa16.82■□□□□ 0.28
CD55-209ENST00000488171 PAX7P23759 505 aa16.82■□□□□ 0.28
CD55-209ENST00000488171 DSCR9P59020 149 aa16.82■□□□□ 0.28
CD55-209ENST00000488171 ARF1P84077 181 aaKnown RBP16.82■□□□□ 0.28
CD55-209ENST00000488171 CHRNB3Q05901 458 aa16.82■□□□□ 0.28
CD55-209ENST00000488171 MS4A18Q3C1V0 323 aa16.82■□□□□ 0.28
CD55-209ENST00000488171 C3orf36Q3SXR2 165 aa16.82■□□□□ 0.28
CD55-209ENST00000488171 CLEC2AQ6UVW9 174 aa16.82■□□□□ 0.28
CD55-209ENST00000488171 TMEM123Q8N131 208 aa16.82■□□□□ 0.28
CD55-209ENST00000488171 C11orf65Q8NCR3 313 aa16.82■□□□□ 0.28
CD55-209ENST00000488171 OR6S1Q8NH40 331 aa16.82■□□□□ 0.28
CD55-209ENST00000488171 RNF217Q8TC41 542 aa16.82■□□□□ 0.28
CD55-209ENST00000488171 CGREF1Q99674 301 aa16.82■□□□□ 0.28
CD55-209ENST00000488171 VIPAS39Q9H9C1 493 aa16.82■□□□□ 0.28
CD55-209ENST00000488171 SEC61A2Q9H9S3 476 aa16.82■□□□□ 0.28
CD55-209ENST00000488171 GPR35Q9HC97 309 aa16.82■□□□□ 0.28
CD55-209ENST00000488171 SLC13A4Q9UKG4 626 aa16.82■□□□□ 0.28
CD55-209ENST00000488171 DNHD1Q96M86 4753 aa16.81■□□□□ 0.28
CD55-209ENST00000488171 GPRIN2O60269 458 aa16.81■□□□□ 0.28
CD55-209ENST00000488171 EDF1O60869 148 aaKnown RBP16.81■□□□□ 0.28
CD55-209ENST00000488171 TP53P04637 393 aaPredicted RBP16.81■□□□□ 0.28
CD55-209ENST00000488171 CECR9P0C854 216 aa16.81■□□□□ 0.28
CD55-209ENST00000488171 HLA-DOBP13765 273 aa16.81■□□□□ 0.28
CD55-209ENST00000488171 HOXB1P14653 301 aaPredicted RBP16.81■□□□□ 0.28
CD55-209ENST00000488171 CDH12P55289 794 aa16.81■□□□□ 0.28
CD55-209ENST00000488171 MTPNP58546 118 aa16.81■□□□□ 0.28
CD55-209ENST00000488171 NAAAQ02083 359 aa16.81■□□□□ 0.28
CD55-209ENST00000488171 RBBP4Q09028 425 aa16.81■□□□□ 0.28
CD55-209ENST00000488171 DUSP7Q16829 419 aa16.81■□□□□ 0.28
CD55-209ENST00000488171 PHYHD1Q5SRE7 291 aa16.81■□□□□ 0.28
CD55-209ENST00000488171 GPR137CQ8N3F9 429 aa16.81■□□□□ 0.28
CD55-209ENST00000488171 FAM169BQ8N8A8 192 aa16.81■□□□□ 0.28
CD55-209ENST00000488171 GPR32P1Q8NGA4 272 aa16.81■□□□□ 0.28
CD55-209ENST00000488171 FBXO17Q96EF6 278 aa16.81■□□□□ 0.28
CD55-209ENST00000488171 MOGAT1Q96PD6 335 aa16.81■□□□□ 0.28
CD55-209ENST00000488171 ARHGDIGQ99819 225 aa16.81■□□□□ 0.28
CD55-209ENST00000488171 EVA1AQ9H8M9 152 aa16.81■□□□□ 0.28
CD55-209ENST00000488171 CRLF2Q9HC73 371 aa16.81■□□□□ 0.28
CD55-209ENST00000488171 NPHS2Q9NP85 383 aa16.81■□□□□ 0.28
CD55-209ENST00000488171 SELENONQ9NZV5 590 aa16.81■□□□□ 0.28
CD55-209ENST00000488171 PMF1-BGLAPU3KQ54 211 aa16.81■□□□□ 0.28
CD55-209ENST00000488171 ALPK2Q86TB3 2170 aa16.81■□□□□ 0.28
CD55-209ENST00000488171 CHD3Q12873 2000 aaKnown RBP16.8■□□□□ 0.28
CD55-209ENST00000488171 ZNF503-AS2A6NEH8 195 aa16.8■□□□□ 0.28
CD55-209ENST00000488171 M0R3H8 397 aa16.8■□□□□ 0.28
CD55-209ENST00000488171 ANGPT2O15123 496 aa16.8■□□□□ 0.28
CD55-209ENST00000488171 TLX2O43763 284 aaPredicted RBP16.8■□□□□ 0.28
CD55-209ENST00000488171 LY6HO94772 140 aa16.8■□□□□ 0.28
CD55-209ENST00000488171 IGKV3-15P01624 115 aa16.8■□□□□ 0.28
CD55-209ENST00000488171 CRYAAP02489 173 aa16.8■□□□□ 0.28
CD55-209ENST00000488171 BMP4P12644 408 aa16.8■□□□□ 0.28
CD55-209ENST00000488171 CALCRP30988 508 aa16.8■□□□□ 0.28
CD55-209ENST00000488171 EFNA4P52798 201 aa16.8■□□□□ 0.28
CD55-209ENST00000488171 IL1RL1Q01638 556 aa16.8■□□□□ 0.28
CD55-209ENST00000488171 MFSD13AQ14CX5 517 aa16.8■□□□□ 0.28
CD55-209ENST00000488171 CYP51A1Q16850 503 aa16.8■□□□□ 0.28
CD55-209ENST00000488171 CEACAM16Q2WEN9 425 aa16.8■□□□□ 0.28
CD55-209ENST00000488171 SWT1Q5T5J6 900 aaKnown RBP16.8■□□□□ 0.28
CD55-209ENST00000488171 NHLRC1Q6VVB1 395 aa16.8■□□□□ 0.28
CD55-209ENST00000488171 MYPOPQ86VE0 399 aaPredicted RBP16.8■□□□□ 0.28
CD55-209ENST00000488171 RANBP3LQ86VV4 465 aaPredicted RBP16.8■□□□□ 0.28
CD55-209ENST00000488171 WDFY1Q8IWB7 410 aa16.8■□□□□ 0.28
CD55-209ENST00000488171 UEVLDQ8IX04 471 aa16.8■□□□□ 0.28
CD55-209ENST00000488171 SCAIQ8N9R8 606 aa16.8■□□□□ 0.28
CD55-209ENST00000488171 PIK3C3Q8NEB9 887 aa16.8■□□□□ 0.28
CD55-209ENST00000488171 NANOS1Q8WY41 292 aaKnown RBP16.8■□□□□ 0.28
CD55-209ENST00000488171 EPYCQ99645 322 aa16.8■□□□□ 0.28
CD55-209ENST00000488171 TMEM43Q9BTV4 400 aa16.8■□□□□ 0.28
CD55-209ENST00000488171 CA10Q9NS85 328 aa16.8■□□□□ 0.28
CD55-209ENST00000488171 TRIM33Q9UPN9 1127 aa16.8■□□□□ 0.28
CD55-209ENST00000488171 CORINQ9Y5Q5 1042 aa16.8■□□□□ 0.28
CD55-209ENST00000488171 LRRN3E7EW58 273 aa16.79■□□□□ 0.28
CD55-209ENST00000488171 M0QX08 132 aa16.79■□□□□ 0.28
CD55-209ENST00000488171 OPN1SWP03999 348 aa16.79■□□□□ 0.28
CD55-209ENST00000488171 CELA3BP08861 270 aa16.79■□□□□ 0.28
CD55-209ENST00000488171 NQO1P15559 274 aaKnown RBP16.79■□□□□ 0.28
CD55-209ENST00000488171 H2AFXP16104 143 aaPredicted RBP16.79■□□□□ 0.28
CD55-209ENST00000488171 NPTX1Q15818 432 aa16.79■□□□□ 0.28
CD55-209ENST00000488171 LINC00114Q6XXX2 140 aa16.79■□□□□ 0.28
CD55-209ENST00000488171 C10orf105Q8TEF2 133 aa16.79■□□□□ 0.28
CD55-209ENST00000488171 TSPEARQ8WU66 669 aa16.79■□□□□ 0.28
CD55-209ENST00000488171 FAM168AQ92567 244 aa16.79■□□□□ 0.28
CD55-209ENST00000488171 MCHR1Q99705 422 aa16.79■□□□□ 0.28
CD55-209ENST00000488171 MDFIQ99750 246 aa16.79■□□□□ 0.28
CD55-209ENST00000488171 KCNS3Q9BQ31 491 aa16.79■□□□□ 0.28
CD55-209ENST00000488171 KAT8Q9H7Z6 458 aaKnown RBP16.79■□□□□ 0.28
CD55-209ENST00000488171 YAE1D1Q9NRH1 226 aa16.79■□□□□ 0.28
CD55-209ENST00000488171 MRPL39Q9NYK5 338 aaKnown RBP16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms