RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 VPS26BQ4G0F5 336 aa9.98□□□□□ -0.81
TRIM56-204ENST00000487252 ZNF311Q5JNZ3 666 aa9.98□□□□□ -0.81
TRIM56-204ENST00000487252 ANKRD16Q6P6B7 361 aa9.98□□□□□ -0.81
TRIM56-204ENST00000487252 PAGE2Q7Z2X7 111 aa9.98□□□□□ -0.81
TRIM56-204ENST00000487252 SLC15A3Q8IY34 581 aa9.98□□□□□ -0.81
TRIM56-204ENST00000487252 METTL4Q8N3J2 472 aa9.98□□□□□ -0.81
TRIM56-204ENST00000487252 DPP10Q8N608 796 aa9.98□□□□□ -0.81
TRIM56-204ENST00000487252 RNF148Q8N7C7 305 aa9.98□□□□□ -0.81
TRIM56-204ENST00000487252 DEFB108BQ8NET1 73 aa9.98□□□□□ -0.81
TRIM56-204ENST00000487252 OR4F6Q8NGB9 312 aa9.98□□□□□ -0.81
TRIM56-204ENST00000487252 METTL6Q8TCB7 284 aa9.98□□□□□ -0.81
TRIM56-204ENST00000487252 PPP1R14AQ96A00 147 aa9.98□□□□□ -0.81
TRIM56-204ENST00000487252 RAB39BQ96DA2 213 aa9.98□□□□□ -0.81
TRIM56-204ENST00000487252 SPDL1Q96EA4 605 aa9.98□□□□□ -0.81
TRIM56-204ENST00000487252 MYCBPQ99417 103 aaPredicted RBP9.98□□□□□ -0.81
TRIM56-204ENST00000487252 MUC13Q9H3R2 512 aa9.98□□□□□ -0.81
TRIM56-204ENST00000487252 Q9N2J8 555 aa9.98□□□□□ -0.81
TRIM56-204ENST00000487252 OBP2BQ9NPH6 170 aa9.98□□□□□ -0.81
TRIM56-204ENST00000487252 AURKAIP1Q9NWT8 199 aaPredicted RBP9.98□□□□□ -0.81
TRIM56-204ENST00000487252 CMTM6Q9NX76 183 aa9.98□□□□□ -0.81
TRIM56-204ENST00000487252 OPTCQ9UBM4 332 aa9.98□□□□□ -0.81
TRIM56-204ENST00000487252 UTS2RQ9UKP6 389 aa9.98□□□□□ -0.81
TRIM56-204ENST00000487252 NOSIPQ9Y314 301 aaKnown RBP9.98□□□□□ -0.81
TRIM56-204ENST00000487252 DTNAQ9Y4J8 743 aa9.98□□□□□ -0.81
TRIM56-204ENST00000487252 SERTM1A2A2V5 107 aa9.97□□□□□ -0.81
TRIM56-204ENST00000487252 AQP12BA6NM10 295 aa9.97□□□□□ -0.81
TRIM56-204ENST00000487252 NPIPB8E9PQR5 432 aa9.97□□□□□ -0.81
TRIM56-204ENST00000487252 SLC28A1O00337 649 aa9.97□□□□□ -0.81
TRIM56-204ENST00000487252 LSM1O15116 133 aaKnown RBP9.97□□□□□ -0.81
TRIM56-204ENST00000487252 PPIHO43447 177 aaKnown RBP9.97□□□□□ -0.81
TRIM56-204ENST00000487252 SEC14L2O76054 403 aa9.97□□□□□ -0.81
TRIM56-204ENST00000487252 IGLV1-44P01699 117 aa9.97□□□□□ -0.81
TRIM56-204ENST00000487252 IGHV2-5P01817 119 aa9.97□□□□□ -0.81
TRIM56-204ENST00000487252 GSNP06396 782 aa9.97□□□□□ -0.81
TRIM56-204ENST00000487252 PAX7P23759 505 aa9.97□□□□□ -0.81
TRIM56-204ENST00000487252 IL12AP29459 219 aa9.97□□□□□ -0.81
TRIM56-204ENST00000487252 EVX1P49640 407 aa9.97□□□□□ -0.81
TRIM56-204ENST00000487252 PRIM2P49643 509 aa9.97□□□□□ -0.81
TRIM56-204ENST00000487252 POLR2JP52435 117 aaKnown RBP9.97□□□□□ -0.81
TRIM56-204ENST00000487252 AQP4P55087 323 aa9.97□□□□□ -0.81
TRIM56-204ENST00000487252 PROK1P58294 105 aa9.97□□□□□ -0.81
TRIM56-204ENST00000487252 UFM1P61960 85 aa9.97□□□□□ -0.81
TRIM56-204ENST00000487252 TGFBR3Q03167 851 aa9.97□□□□□ -0.81
TRIM56-204ENST00000487252 ZNF155Q12901 538 aaPredicted RBP9.97□□□□□ -0.81
TRIM56-204ENST00000487252 DOC2BQ14184 412 aa9.97□□□□□ -0.81
TRIM56-204ENST00000487252 CPSF6Q16630 551 aaKnown RBP eCLIP9.97□□□□□ -0.81
TRIM56-204ENST00000487252 LCN8Q6JVE9 175 aa9.97□□□□□ -0.81
TRIM56-204ENST00000487252 GALNT18Q6P9A2 607 aa9.97□□□□□ -0.81
TRIM56-204ENST00000487252 C9orf139Q6ZV77 190 aa9.97□□□□□ -0.81
TRIM56-204ENST00000487252 IKBIPQ70UQ0 350 aa9.97□□□□□ -0.81
TRIM56-204ENST00000487252 TRIM46Q7Z4K8 759 aa9.97□□□□□ -0.81
TRIM56-204ENST00000487252 SPATA24Q86W54 205 aa9.97□□□□□ -0.81
TRIM56-204ENST00000487252 DHFR2Q86XF0 187 aa9.97□□□□□ -0.81
TRIM56-204ENST00000487252 ADGRG3Q86Y34 549 aa9.97□□□□□ -0.81
TRIM56-204ENST00000487252 AQP12AQ8IXF9 295 aa9.97□□□□□ -0.81
TRIM56-204ENST00000487252 L3MBTL4Q8NA19 623 aa9.97□□□□□ -0.81
TRIM56-204ENST00000487252 FAM156AQ8NDB6 213 aa9.97□□□□□ -0.81
TRIM56-204ENST00000487252 SLCO4A1Q96BD0 722 aa9.97□□□□□ -0.81
TRIM56-204ENST00000487252 TEX37Q96LM6 180 aa9.97□□□□□ -0.81
TRIM56-204ENST00000487252 PPP3R2Q96LZ3 170 aa9.97□□□□□ -0.81
TRIM56-204ENST00000487252 KCNS3Q9BQ31 491 aa9.97□□□□□ -0.81
TRIM56-204ENST00000487252 LMF2Q9BU23 707 aaKnown RBP9.97□□□□□ -0.81
TRIM56-204ENST00000487252 ZNF416Q9BWM5 594 aa9.97□□□□□ -0.81
TRIM56-204ENST00000487252 VCXQ9H320 206 aa9.97□□□□□ -0.81
TRIM56-204ENST00000487252 IPPKQ9H8X2 491 aa9.97□□□□□ -0.81
TRIM56-204ENST00000487252 ARMC1Q9NVT9 282 aa9.97□□□□□ -0.81
TRIM56-204ENST00000487252 NECAP2Q9NVZ3 263 aa9.97□□□□□ -0.81
TRIM56-204ENST00000487252 LEF1Q9UJU2 399 aaPredicted RBP9.97□□□□□ -0.81
TRIM56-204ENST00000487252 AP4S1Q9Y587 144 aa9.97□□□□□ -0.81
TRIM56-204ENST00000487252 A0A087WV62 115 aa9.96□□□□□ -0.82
TRIM56-204ENST00000487252 MANBAO00462 879 aa9.96□□□□□ -0.82
TRIM56-204ENST00000487252 COQ9O75208 318 aa9.96□□□□□ -0.82
TRIM56-204ENST00000487252 LYNP07948 512 aa9.96□□□□□ -0.82
TRIM56-204ENST00000487252 CECR9P0C854 216 aa9.96□□□□□ -0.82
TRIM56-204ENST00000487252 ATP6V1B2P21281 511 aa9.96□□□□□ -0.82
TRIM56-204ENST00000487252 HSPA13P48723 471 aa9.96□□□□□ -0.82
TRIM56-204ENST00000487252 SLC16A1P53985 500 aa9.96□□□□□ -0.82
TRIM56-204ENST00000487252 NME5P56597 212 aa9.96□□□□□ -0.82
TRIM56-204ENST00000487252 KIAA0040Q15053 153 aa9.96□□□□□ -0.82
TRIM56-204ENST00000487252 GGTA1PQ4G0N0 100 aa9.96□□□□□ -0.82
TRIM56-204ENST00000487252 ATP6AP1LQ52LC2 224 aa9.96□□□□□ -0.82
TRIM56-204ENST00000487252 C9orf135Q5VTT2 229 aa9.96□□□□□ -0.82
TRIM56-204ENST00000487252 IL23RQ5VWK5 629 aa9.96□□□□□ -0.82
TRIM56-204ENST00000487252 TMEM154Q6P9G4 183 aa9.96□□□□□ -0.82
TRIM56-204ENST00000487252 COMMD6Q7Z4G1 85 aa9.96□□□□□ -0.82
TRIM56-204ENST00000487252 ARPINQ7Z6K5 226 aa9.96□□□□□ -0.82
TRIM56-204ENST00000487252 MISPQ8IVT2 679 aa9.96□□□□□ -0.82
TRIM56-204ENST00000487252 B4GALNT2Q8NHY0 566 aa9.96□□□□□ -0.82
TRIM56-204ENST00000487252 SH3YL1Q96HL8 342 aaPredicted RBP9.96□□□□□ -0.82
TRIM56-204ENST00000487252 LRGUKQ96M69 825 aa9.96□□□□□ -0.82
TRIM56-204ENST00000487252 CDK15Q96Q40 435 aa9.96□□□□□ -0.82
TRIM56-204ENST00000487252 PCDHAC1Q9H158 963 aa9.96□□□□□ -0.82
TRIM56-204ENST00000487252 MS4A5Q9H3V2 200 aa9.96□□□□□ -0.82
TRIM56-204ENST00000487252 PRDM13Q9H4Q3 707 aa9.96□□□□□ -0.82
TRIM56-204ENST00000487252 AHSPQ9NZD4 102 aa9.96□□□□□ -0.82
TRIM56-204ENST00000487252 ACTR3BQ9P1U1 418 aa9.96□□□□□ -0.82
TRIM56-204ENST00000487252 SCOCQ9UIL1 159 aa9.96□□□□□ -0.82
TRIM56-204ENST00000487252 RAB26Q9ULW5 256 aa9.96□□□□□ -0.82
TRIM56-204ENST00000487252 C19orf53Q9UNZ5 99 aaPredicted RBP9.96□□□□□ -0.82
TRIM56-204ENST00000487252 GPC6Q9Y625 555 aaPredicted RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms