RNA–Protein interactions for RNA: ENST00000486975.1

CLDN11-207, Transcript of claudin 11, humanhuman

TSL 2 BASIC

Gene CLDN11, Length 1,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-207ENST00000486975 IGHV4-39P01824 125 aa12.6□□□□□ -0.39
CLDN11-207ENST00000486975 GRPRP30550 384 aa12.6□□□□□ -0.39
CLDN11-207ENST00000486975 MTPNP58546 118 aa12.6□□□□□ -0.39
CLDN11-207ENST00000486975 DMTNQ08495 405 aa12.6□□□□□ -0.39
CLDN11-207ENST00000486975 TNK1Q13470 666 aa12.6□□□□□ -0.39
CLDN11-207ENST00000486975 NFYCQ13952 458 aa12.6□□□□□ -0.39
CLDN11-207ENST00000486975 OR1Q1Q15612 314 aa12.6□□□□□ -0.39
CLDN11-207ENST00000486975 CLEC12BQ2HXU8 276 aa12.6□□□□□ -0.39
CLDN11-207ENST00000486975 B3GLCTQ6Y288 498 aa12.6□□□□□ -0.39
CLDN11-207ENST00000486975 H1FNTQ75WM6 255 aaPredicted RBP12.6□□□□□ -0.39
CLDN11-207ENST00000486975 SCAIQ8N9R8 606 aa12.6□□□□□ -0.39
CLDN11-207ENST00000486975 OR1K1Q8NGR3 316 aa12.6□□□□□ -0.39
CLDN11-207ENST00000486975 ZNF417Q8TAU3 575 aa12.6□□□□□ -0.39
CLDN11-207ENST00000486975 ALKBH3Q96Q83 286 aaPredicted RBP12.6□□□□□ -0.39
CLDN11-207ENST00000486975 ZNF587Q96SQ5 575 aaPredicted RBP12.6□□□□□ -0.39
CLDN11-207ENST00000486975 EPYCQ99645 322 aa12.6□□□□□ -0.39
CLDN11-207ENST00000486975 ARHGDIGQ99819 225 aa12.6□□□□□ -0.39
CLDN11-207ENST00000486975 TMEM43Q9BTV4 400 aa12.6□□□□□ -0.39
CLDN11-207ENST00000486975 CBLN4Q9NTU7 201 aa12.6□□□□□ -0.39
CLDN11-207ENST00000486975 POU2F3Q9UKI9 436 aa12.6□□□□□ -0.39
CLDN11-207ENST00000486975 HIVEP2P31629 2446 aa12.6□□□□□ -0.39
CLDN11-207ENST00000486975 M0QX08 132 aa12.59□□□□□ -0.39
CLDN11-207ENST00000486975 SMAD7O15105 426 aaKnown RBP12.59□□□□□ -0.39
CLDN11-207ENST00000486975 TRAF3IP2O43734 574 aaPredicted RBP12.59□□□□□ -0.39
CLDN11-207ENST00000486975 AKAP8O43823 692 aaKnown RBP12.59□□□□□ -0.39
CLDN11-207ENST00000486975 SLC43A1O75387 559 aa12.59□□□□□ -0.39
CLDN11-207ENST00000486975 LGI1O95970 557 aa12.59□□□□□ -0.39
CLDN11-207ENST00000486975 PCGF2P35227 344 aa12.59□□□□□ -0.39
CLDN11-207ENST00000486975 CLDN17P56750 224 aa12.59□□□□□ -0.39
CLDN11-207ENST00000486975 SELPLGQ14242 412 aa12.59□□□□□ -0.39
CLDN11-207ENST00000486975 TRMT5Q32P41 509 aaKnown RBP12.59□□□□□ -0.39
CLDN11-207ENST00000486975 C3orf36Q3SXR2 165 aa12.59□□□□□ -0.39
CLDN11-207ENST00000486975 TBRG1Q3YBR2 411 aa12.59□□□□□ -0.39
CLDN11-207ENST00000486975 HIKESHIQ53FT3 197 aa12.59□□□□□ -0.39
CLDN11-207ENST00000486975 COQ5Q5HYK3 327 aa12.59□□□□□ -0.39
CLDN11-207ENST00000486975 ANKRD16Q6P6B7 361 aa12.59□□□□□ -0.39
CLDN11-207ENST00000486975 ZNF613Q6PF04 617 aa12.59□□□□□ -0.39
CLDN11-207ENST00000486975 Q71RC1 249 aaPredicted RBP12.59□□□□□ -0.39
CLDN11-207ENST00000486975 LINGO2Q7L985 606 aa12.59□□□□□ -0.39
CLDN11-207ENST00000486975 PATL1Q86TB9 770 aaKnown RBP12.59□□□□□ -0.39
CLDN11-207ENST00000486975 FBXL14Q8N1E6 418 aa12.59□□□□□ -0.39
CLDN11-207ENST00000486975 MUC15Q8N387 334 aa12.59□□□□□ -0.39
CLDN11-207ENST00000486975 FAM169BQ8N8A8 192 aa12.59□□□□□ -0.39
CLDN11-207ENST00000486975 BCL2L2Q92843 193 aaPredicted RBP12.59□□□□□ -0.39
CLDN11-207ENST00000486975 WFDC6Q9BQY6 131 aa12.59□□□□□ -0.39
CLDN11-207ENST00000486975 TMEM120AQ9BXJ8 343 aa12.59□□□□□ -0.39
CLDN11-207ENST00000486975 CRNNQ9UBG3 495 aaPredicted RBP12.59□□□□□ -0.39
CLDN11-207ENST00000486975 SEC14L4Q9UDX3 406 aa12.59□□□□□ -0.39
CLDN11-207ENST00000486975 H7C417 338 aa12.58□□□□□ -0.4
CLDN11-207ENST00000486975 FBP2O00757 339 aa12.58□□□□□ -0.4
CLDN11-207ENST00000486975 CHP2O43745 196 aa12.58□□□□□ -0.4
CLDN11-207ENST00000486975 UPK3AO75631 287 aa12.58□□□□□ -0.4
CLDN11-207ENST00000486975 MT-ATP6P00846 226 aa12.58□□□□□ -0.4
CLDN11-207ENST00000486975 BGLAPP02818 100 aa12.58□□□□□ -0.4
CLDN11-207ENST00000486975 TROVE2P10155 538 aaKnown RBP eCLIP12.58□□□□□ -0.4
CLDN11-207ENST00000486975 CDH12P55289 794 aa12.58□□□□□ -0.4
CLDN11-207ENST00000486975 ROR2Q01974 943 aaKnown RBP12.58□□□□□ -0.4
CLDN11-207ENST00000486975 LGALS3BPQ08380 585 aa12.58□□□□□ -0.4
CLDN11-207ENST00000486975 C1DQ13901 141 aaKnown RBP12.58□□□□□ -0.4
CLDN11-207ENST00000486975 VEZF1Q14119 521 aa12.58□□□□□ -0.4
CLDN11-207ENST00000486975 DUSP7Q16829 419 aa12.58□□□□□ -0.4
CLDN11-207ENST00000486975 INTS11Q5TA45 600 aaKnown RBP12.58□□□□□ -0.4
CLDN11-207ENST00000486975 HMBOX1Q6NT76 420 aa12.58□□□□□ -0.4
CLDN11-207ENST00000486975 LINC00114Q6XXX2 140 aa12.58□□□□□ -0.4
CLDN11-207ENST00000486975 TMEM123Q8N131 208 aa12.58□□□□□ -0.4
CLDN11-207ENST00000486975 KDM8Q8N371 416 aa12.58□□□□□ -0.4
CLDN11-207ENST00000486975 SMYD1Q8NB12 490 aa12.58□□□□□ -0.4
CLDN11-207ENST00000486975 PIK3C3Q8NEB9 887 aa12.58□□□□□ -0.4
CLDN11-207ENST00000486975 GPR32P1Q8NGA4 272 aa12.58□□□□□ -0.4
CLDN11-207ENST00000486975 ADAD1Q96M93 576 aaKnown RBP12.58□□□□□ -0.4
CLDN11-207ENST00000486975 HS6ST2Q96MM7 605 aa12.58□□□□□ -0.4
CLDN11-207ENST00000486975 MCHR1Q99705 422 aa12.58□□□□□ -0.4
CLDN11-207ENST00000486975 SH3GL1Q99961 368 aa12.58□□□□□ -0.4
CLDN11-207ENST00000486975 C1QTNF6Q9BXI9 259 aa12.58□□□□□ -0.4
CLDN11-207ENST00000486975 NELFAQ9H3P2 528 aa12.58□□□□□ -0.4
CLDN11-207ENST00000486975 MRPL39Q9NYK5 338 aaKnown RBP12.58□□□□□ -0.4
CLDN11-207ENST00000486975 NDUFS7O75251 213 aa12.57□□□□□ -0.4
CLDN11-207ENST00000486975 NPPAP01160 153 aa12.57□□□□□ -0.4
CLDN11-207ENST00000486975 CDH2P19022 906 aaPredicted RBP12.57□□□□□ -0.4
CLDN11-207ENST00000486975 CD247P20963 164 aa12.57□□□□□ -0.4
CLDN11-207ENST00000486975 ACVR1BP36896 505 aa12.57□□□□□ -0.4
CLDN11-207ENST00000486975 GZMMP51124 257 aa12.57□□□□□ -0.4
CLDN11-207ENST00000486975 FABP6P51161 128 aa12.57□□□□□ -0.4
CLDN11-207ENST00000486975 UBE2NP61088 152 aaKnown RBP12.57□□□□□ -0.4
CLDN11-207ENST00000486975 CYLC2Q14093 348 aaPredicted RBP12.57□□□□□ -0.4
CLDN11-207ENST00000486975 NPTX1Q15818 432 aa12.57□□□□□ -0.4
CLDN11-207ENST00000486975 VMACQ2NL98 169 aa12.57□□□□□ -0.4
CLDN11-207ENST00000486975 NANOGP8Q6NSW7 305 aa12.57□□□□□ -0.4
CLDN11-207ENST00000486975 NHLRC1Q6VVB1 395 aa12.57□□□□□ -0.4
CLDN11-207ENST00000486975 CCDC80Q76M96 950 aa12.57□□□□□ -0.4
CLDN11-207ENST00000486975 OR8J3Q8NGG0 315 aa12.57□□□□□ -0.4
CLDN11-207ENST00000486975 OR6T1Q8NGN1 323 aa12.57□□□□□ -0.4
CLDN11-207ENST00000486975 OR10A6Q8NH74 314 aa12.57□□□□□ -0.4
CLDN11-207ENST00000486975 RASSF5Q8WWW0 418 aa12.57□□□□□ -0.4
CLDN11-207ENST00000486975 SLC38A2Q96QD8 506 aa12.57□□□□□ -0.4
CLDN11-207ENST00000486975 OR2M2Q96R28 347 aa12.57□□□□□ -0.4
CLDN11-207ENST00000486975 KATNB1Q9BVA0 655 aa12.57□□□□□ -0.4
CLDN11-207ENST00000486975 ASPNQ9BXN1 380 aa12.57□□□□□ -0.4
CLDN11-207ENST00000486975 CACNG6Q9BXT2 260 aa12.57□□□□□ -0.4
CLDN11-207ENST00000486975 PCDHAC1Q9H158 963 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms