RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 IL1RL1Q01638 556 aa11.39□□□□□ -0.59
HDAC6-229ENST00000486665 RBPJQ06330 500 aa11.39□□□□□ -0.59
HDAC6-229ENST00000486665 RPL18Q07020 188 aaKnown RBP11.39□□□□□ -0.59
HDAC6-229ENST00000486665 ZP4Q12836 540 aa11.39□□□□□ -0.59
HDAC6-229ENST00000486665 COX10Q12887 443 aa11.39□□□□□ -0.59
HDAC6-229ENST00000486665 RFX4Q33E94 735 aa11.39□□□□□ -0.59
HDAC6-229ENST00000486665 NHLRC1Q6VVB1 395 aa11.39□□□□□ -0.59
HDAC6-229ENST00000486665 THSD4Q6ZMP0 1018 aa11.39□□□□□ -0.59
HDAC6-229ENST00000486665 C3P1Q6ZMU1 363 aa11.39□□□□□ -0.59
HDAC6-229ENST00000486665 RASSF6Q6ZTQ3 369 aa11.39□□□□□ -0.59
HDAC6-229ENST00000486665 SEM1Q6ZVN7 128 aa11.39□□□□□ -0.59
HDAC6-229ENST00000486665 FCRLAQ7L513 359 aa11.39□□□□□ -0.59
HDAC6-229ENST00000486665 NANOGNBQ7Z5D8 188 aa11.39□□□□□ -0.59
HDAC6-229ENST00000486665 IGFN1Q86VF2 1251 aa11.39□□□□□ -0.59
HDAC6-229ENST00000486665 RPRMLQ8N4K4 120 aa11.39□□□□□ -0.59
HDAC6-229ENST00000486665 ADPRHL1Q8NDY3 354 aa11.39□□□□□ -0.59
HDAC6-229ENST00000486665 OR8D4Q8NGM9 314 aa11.39□□□□□ -0.59
HDAC6-229ENST00000486665 ZHX1-C8orf76Q96EF9 292 aa11.39□□□□□ -0.59
HDAC6-229ENST00000486665 SAMD8Q96LT4 415 aa11.39□□□□□ -0.59
HDAC6-229ENST00000486665 PLA2G12AQ9BZM1 189 aa11.39□□□□□ -0.59
HDAC6-229ENST00000486665 PAPOLBQ9NRJ5 636 aaKnown RBP11.39□□□□□ -0.59
HDAC6-229ENST00000486665 KRT84Q9NSB2 600 aa11.39□□□□□ -0.59
HDAC6-229ENST00000486665 PAQR5Q9NXK6 330 aaPredicted RBP11.39□□□□□ -0.59
HDAC6-229ENST00000486665 B3GAT1Q9P2W7 334 aa11.39□□□□□ -0.59
HDAC6-229ENST00000486665 CLCF1Q9UBD9 225 aa11.39□□□□□ -0.59
HDAC6-229ENST00000486665 IL20RAQ9UHF4 553 aa11.39□□□□□ -0.59
HDAC6-229ENST00000486665 ING1Q9UK53 422 aaPredicted RBP11.39□□□□□ -0.59
HDAC6-229ENST00000486665 FAM215AQ9Y5M1 114 aa11.39□□□□□ -0.59
HDAC6-229ENST00000486665 CELSR1Q9NYQ6 3014 aa11.38□□□□□ -0.59
HDAC6-229ENST00000486665 SLC22A20A6NK97 555 aa11.38□□□□□ -0.59
HDAC6-229ENST00000486665 C11orf98E9PRG8 122 aa11.38□□□□□ -0.59
HDAC6-229ENST00000486665 DLGAP1O14490 977 aa11.38□□□□□ -0.59
HDAC6-229ENST00000486665 PRRG2O14669 202 aa11.38□□□□□ -0.59
HDAC6-229ENST00000486665 CYTIPO60759 359 aa11.38□□□□□ -0.59
HDAC6-229ENST00000486665 ZG16O60844 167 aa11.38□□□□□ -0.59
HDAC6-229ENST00000486665 WDR1O75083 606 aa11.38□□□□□ -0.59
HDAC6-229ENST00000486665 OR6A2O95222 327 aa11.38□□□□□ -0.59
HDAC6-229ENST00000486665 SOX14O95416 240 aa11.38□□□□□ -0.59
HDAC6-229ENST00000486665 F13BP05160 661 aa11.38□□□□□ -0.59
HDAC6-229ENST00000486665 OSMP13725 252 aa11.38□□□□□ -0.59
HDAC6-229ENST00000486665 GABRA1P14867 456 aa11.38□□□□□ -0.59
HDAC6-229ENST00000486665 AHCYP23526 432 aa11.38□□□□□ -0.59
HDAC6-229ENST00000486665 IGFBP5P24593 272 aa11.38□□□□□ -0.59
HDAC6-229ENST00000486665 ACVR2AP27037 513 aa11.38□□□□□ -0.59
HDAC6-229ENST00000486665 PTDSS1P48651 473 aaKnown RBP11.38□□□□□ -0.59
HDAC6-229ENST00000486665 ZIK1Q3SY52 487 aaPredicted RBP11.38□□□□□ -0.59
HDAC6-229ENST00000486665 C1orf185Q5T7R7 199 aa11.38□□□□□ -0.59
HDAC6-229ENST00000486665 NSUN5P2Q63ZY6 315 aa11.38□□□□□ -0.59
HDAC6-229ENST00000486665 TMEM225Q6GV28 225 aa11.38□□□□□ -0.59
HDAC6-229ENST00000486665 ABLIM2Q6H8Q1 611 aa11.38□□□□□ -0.59
HDAC6-229ENST00000486665 SMARCD3Q6STE5 483 aa11.38□□□□□ -0.59
HDAC6-229ENST00000486665 ZNF620Q6ZNG0 422 aa11.38□□□□□ -0.59
HDAC6-229ENST00000486665 C9orf106Q8NAJ2 232 aa11.38□□□□□ -0.59
HDAC6-229ENST00000486665 ABHD3Q8WU67 409 aa11.38□□□□□ -0.59
HDAC6-229ENST00000486665 ZNF775Q96BV0 537 aaPredicted RBP11.38□□□□□ -0.59
HDAC6-229ENST00000486665 PRRG4Q9BZD6 226 aa11.38□□□□□ -0.59
HDAC6-229ENST00000486665 OR52D1Q9H346 318 aa11.38□□□□□ -0.59
HDAC6-229ENST00000486665 CALHM2Q9HA72 323 aa11.38□□□□□ -0.59
HDAC6-229ENST00000486665 IL20Q9NYY1 176 aa11.38□□□□□ -0.59
HDAC6-229ENST00000486665 TINAGQ9UJW2 476 aa11.38□□□□□ -0.59
HDAC6-229ENST00000486665 MCTS1Q9ULC4 181 aaKnown RBP11.38□□□□□ -0.59
HDAC6-229ENST00000486665 RASD1Q9Y272 281 aa11.38□□□□□ -0.59
HDAC6-229ENST00000486665 POFUT2Q9Y2G5 429 aa11.38□□□□□ -0.59
HDAC6-229ENST00000486665 ZNF175Q9Y473 711 aa11.38□□□□□ -0.59
HDAC6-229ENST00000486665 CDH10Q9Y6N8 788 aa11.38□□□□□ -0.59
HDAC6-229ENST00000486665 MPDZO75970 2070 aa11.38□□□□□ -0.59
HDAC6-229ENST00000486665 TACC2O95359 2948 aa11.38□□□□□ -0.59
HDAC6-229ENST00000486665 LOC102725191A0A1B0GVB3 256 aa11.37□□□□□ -0.59
HDAC6-229ENST00000486665 A0A1W2PNV4 684 aa11.37□□□□□ -0.59
HDAC6-229ENST00000486665 CD8B2A6NJW9 211 aa11.37□□□□□ -0.59
HDAC6-229ENST00000486665 ZNF716A6NP11 495 aa11.37□□□□□ -0.59
HDAC6-229ENST00000486665 MCIDASD6RGH6 385 aa11.37□□□□□ -0.59
HDAC6-229ENST00000486665 RNF13O43567 381 aa11.37□□□□□ -0.59
HDAC6-229ENST00000486665 NDUFB2O95178 105 aa11.37□□□□□ -0.59
HDAC6-229ENST00000486665 RCBTB2O95199 551 aa11.37□□□□□ -0.59
HDAC6-229ENST00000486665 POU1F1P28069 291 aa11.37□□□□□ -0.59
HDAC6-229ENST00000486665 EPHA2P29317 976 aa11.37□□□□□ -0.59
HDAC6-229ENST00000486665 CTXN1P60606 82 aa11.37□□□□□ -0.59
HDAC6-229ENST00000486665 PUDPQ08623 228 aa11.37□□□□□ -0.59
HDAC6-229ENST00000486665 RASGEF1BQ0VAM2 473 aa11.37□□□□□ -0.59
HDAC6-229ENST00000486665 SLC17A1Q14916 467 aa11.37□□□□□ -0.59
HDAC6-229ENST00000486665 SLC36A3Q495N2 470 aa11.37□□□□□ -0.59
HDAC6-229ENST00000486665 ALG10Q5BKT4 473 aa11.37□□□□□ -0.59
HDAC6-229ENST00000486665 MYO7BQ6PIF6 2116 aa11.37□□□□□ -0.59
HDAC6-229ENST00000486665 P4HA3Q7Z4N8 544 aa11.37□□□□□ -0.59
HDAC6-229ENST00000486665 GPAT4Q86UL3 456 aa11.37□□□□□ -0.59
HDAC6-229ENST00000486665 WDFY1Q8IWB7 410 aa11.37□□□□□ -0.59
HDAC6-229ENST00000486665 PARP8Q8N3A8 854 aa11.37□□□□□ -0.59
HDAC6-229ENST00000486665 CLDN22Q8N7P3 220 aa11.37□□□□□ -0.59
HDAC6-229ENST00000486665 ZIC4Q8N9L1 334 aa11.37□□□□□ -0.59
HDAC6-229ENST00000486665 OR9K2Q8NGE7 335 aa11.37□□□□□ -0.59
HDAC6-229ENST00000486665 FANK1Q8TC84 345 aa11.37□□□□□ -0.59
HDAC6-229ENST00000486665 RNF128Q8TEB7 428 aa11.37□□□□□ -0.59
HDAC6-229ENST00000486665 DNAJC9Q8WXX5 260 aa11.37□□□□□ -0.59
HDAC6-229ENST00000486665 WNT2BQ93097 391 aa11.37□□□□□ -0.59
HDAC6-229ENST00000486665 MARVELD3Q96A59 401 aa11.37□□□□□ -0.59
HDAC6-229ENST00000486665 TXNDC15Q96J42 360 aa11.37□□□□□ -0.59
HDAC6-229ENST00000486665 OXGR1Q96P68 337 aa11.37□□□□□ -0.59
HDAC6-229ENST00000486665 MBOAT4Q96T53 435 aa11.37□□□□□ -0.59
HDAC6-229ENST00000486665 FANCFQ9NPI8 374 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms