RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 OR8J3Q8NGG0 315 aa15.46■□□□□ 0.07
COL6A1-204ENST00000486023 OR1K1Q8NGR3 316 aa15.46■□□□□ 0.07
COL6A1-204ENST00000486023 ADAMTS16Q8TE57 1224 aa15.46■□□□□ 0.07
COL6A1-204ENST00000486023 PROX1Q92786 737 aa15.46■□□□□ 0.07
COL6A1-204ENST00000486023 RCN3Q96D15 328 aa15.46■□□□□ 0.07
COL6A1-204ENST00000486023 FAM107BQ9H098 131 aa15.46■□□□□ 0.07
COL6A1-204ENST00000486023 EVA1AQ9H8M9 152 aa15.46■□□□□ 0.07
COL6A1-204ENST00000486023 FAIMQ9NVQ4 179 aa15.46■□□□□ 0.07
COL6A1-204ENST00000486023 B3GAT1Q9P2W7 334 aa15.46■□□□□ 0.07
COL6A1-204ENST00000486023 DSCAMO60469 2012 aa15.46■□□□□ 0.07
COL6A1-204ENST00000486023 OR6C65A6NJZ3 312 aa15.45■□□□□ 0.06
COL6A1-204ENST00000486023 C11orf98E9PRG8 122 aa15.45■□□□□ 0.06
COL6A1-204ENST00000486023 FMO6PO60774 539 aa15.45■□□□□ 0.06
COL6A1-204ENST00000486023 CH25HO95992 272 aa15.45■□□□□ 0.06
COL6A1-204ENST00000486023 NPPAP01160 153 aa15.45■□□□□ 0.06
COL6A1-204ENST00000486023 FABP6P51161 128 aa15.45■□□□□ 0.06
COL6A1-204ENST00000486023 ARF1P84077 181 aaKnown RBP15.45■□□□□ 0.06
COL6A1-204ENST00000486023 POU3F1Q03052 451 aaPredicted RBP15.45■□□□□ 0.06
COL6A1-204ENST00000486023 MFSD13AQ14CX5 517 aa15.45■□□□□ 0.06
COL6A1-204ENST00000486023 TBRG1Q3YBR2 411 aa15.45■□□□□ 0.06
COL6A1-204ENST00000486023 LRRC23Q53EV4 343 aaPredicted RBP15.45■□□□□ 0.06
COL6A1-204ENST00000486023 COQ5Q5HYK3 327 aa15.45■□□□□ 0.06
COL6A1-204ENST00000486023 PRSS57Q6UWY2 283 aa15.45■□□□□ 0.06
COL6A1-204ENST00000486023 CLEC9AQ6UXN8 241 aa15.45■□□□□ 0.06
COL6A1-204ENST00000486023 DEF8Q6ZN54 512 aa15.45■□□□□ 0.06
COL6A1-204ENST00000486023 CARM1Q86X55 608 aa15.45■□□□□ 0.06
COL6A1-204ENST00000486023 C17orf78Q8N4C9 275 aa15.45■□□□□ 0.06
COL6A1-204ENST00000486023 RASSF5Q8WWW0 418 aa15.45■□□□□ 0.06
COL6A1-204ENST00000486023 IGFBPL1Q8WX77 278 aa15.45■□□□□ 0.06
COL6A1-204ENST00000486023 TXNDC15Q96J42 360 aa15.45■□□□□ 0.06
COL6A1-204ENST00000486023 TPD52L3Q96J77 140 aa15.45■□□□□ 0.06
COL6A1-204ENST00000486023 ZNF583Q96ND8 569 aa15.45■□□□□ 0.06
COL6A1-204ENST00000486023 BDH2Q9BUT1 245 aa15.45■□□□□ 0.06
COL6A1-204ENST00000486023 CCDC134Q9H6E4 229 aa15.45■□□□□ 0.06
COL6A1-204ENST00000486023 ZNF701Q9NV72 531 aaPredicted RBP15.45■□□□□ 0.06
COL6A1-204ENST00000486023 CORINQ9Y5Q5 1042 aa15.45■□□□□ 0.06
COL6A1-204ENST00000486023 ARID1AO14497 2285 aa15.45■□□□□ 0.06
COL6A1-204ENST00000486023 TRAPPC13A5PLN9 417 aa15.44■□□□□ 0.06
COL6A1-204ENST00000486023 ZNF726A6NNF4 738 aa15.44■□□□□ 0.06
COL6A1-204ENST00000486023 CHP2O43745 196 aa15.44■□□□□ 0.06
COL6A1-204ENST00000486023 AKAP8O43823 692 aaKnown RBP15.44■□□□□ 0.06
COL6A1-204ENST00000486023 NDUFS7O75251 213 aa15.44■□□□□ 0.06
COL6A1-204ENST00000486023 SEC14L2O76054 403 aa15.44■□□□□ 0.06
COL6A1-204ENST00000486023 THY1P04216 161 aa15.44■□□□□ 0.06
COL6A1-204ENST00000486023 ADORA3P0DMS8 318 aa15.44■□□□□ 0.06
COL6A1-204ENST00000486023 UMPSP11172 480 aa15.44■□□□□ 0.06
COL6A1-204ENST00000486023 CAPZA2P47755 286 aa15.44■□□□□ 0.06
COL6A1-204ENST00000486023 OR1E2P47887 323 aa15.44■□□□□ 0.06
COL6A1-204ENST00000486023 CEACAM16Q2WEN9 425 aa15.44■□□□□ 0.06
COL6A1-204ENST00000486023 SWT1Q5T5J6 900 aaKnown RBP15.44■□□□□ 0.06
COL6A1-204ENST00000486023 AGAP6Q5VW22 663 aa15.44■□□□□ 0.06
COL6A1-204ENST00000486023 B3GLCTQ6Y288 498 aa15.44■□□□□ 0.06
COL6A1-204ENST00000486023 WDR88Q6ZMY6 472 aa15.44■□□□□ 0.06
COL6A1-204ENST00000486023 CCDC80Q76M96 950 aa15.44■□□□□ 0.06
COL6A1-204ENST00000486023 TSPYL5Q86VY4 417 aaPredicted RBP15.44■□□□□ 0.06
COL6A1-204ENST00000486023 CALHM3Q86XJ0 350 aa15.44■□□□□ 0.06
COL6A1-204ENST00000486023 FBXL14Q8N1E6 418 aa15.44■□□□□ 0.06
COL6A1-204ENST00000486023 PIK3C3Q8NEB9 887 aa15.44■□□□□ 0.06
COL6A1-204ENST00000486023 BCL2L2Q92843 193 aaPredicted RBP15.44■□□□□ 0.06
COL6A1-204ENST00000486023 OR2M2Q96R28 347 aa15.44■□□□□ 0.06
COL6A1-204ENST00000486023 KCNS3Q9BQ31 491 aa15.44■□□□□ 0.06
COL6A1-204ENST00000486023 ELAC2Q9BQ52 826 aaKnown RBP15.44■□□□□ 0.06
COL6A1-204ENST00000486023 TMEM43Q9BTV4 400 aa15.44■□□□□ 0.06
COL6A1-204ENST00000486023 TRAF4Q9BUZ4 470 aaPredicted RBP15.44■□□□□ 0.06
COL6A1-204ENST00000486023 AMBRA1Q9C0C7 1298 aa15.44■□□□□ 0.06
COL6A1-204ENST00000486023 CRLF2Q9HC73 371 aa15.44■□□□□ 0.06
COL6A1-204ENST00000486023 MED29Q9NX70 200 aa15.44■□□□□ 0.06
COL6A1-204ENST00000486023 GDF2Q9UK05 429 aaPredicted RBP15.44■□□□□ 0.06
COL6A1-204ENST00000486023 MOKQ9UQ07 419 aa15.44■□□□□ 0.06
COL6A1-204ENST00000486023 USF3Q68DE3 2245 aa15.44■□□□□ 0.06
COL6A1-204ENST00000486023 ZFHX3Q15911 3703 aa15.43■□□□□ 0.06
COL6A1-204ENST00000486023 ZNF432O94892 652 aa15.43■□□□□ 0.06
COL6A1-204ENST00000486023 IFNA14P01570 189 aa15.43■□□□□ 0.06
COL6A1-204ENST00000486023 CD8AP01732 235 aa15.43■□□□□ 0.06
COL6A1-204ENST00000486023 HIST1H2ABP04908 130 aa15.43■□□□□ 0.06
COL6A1-204ENST00000486023 COX4I1P13073 169 aa15.43■□□□□ 0.06
COL6A1-204ENST00000486023 CRYBA2P53672 197 aa15.43■□□□□ 0.06
COL6A1-204ENST00000486023 TAS2R41P59536 307 aa15.43■□□□□ 0.06
COL6A1-204ENST00000486023 PUDPQ08623 228 aa15.43■□□□□ 0.06
COL6A1-204ENST00000486023 CAMK2DQ13557 499 aa15.43■□□□□ 0.06
COL6A1-204ENST00000486023 VEZF1Q14119 521 aa15.43■□□□□ 0.06
COL6A1-204ENST00000486023 CLEC12BQ2HXU8 276 aa15.43■□□□□ 0.06
COL6A1-204ENST00000486023 PHYHD1Q5SRE7 291 aa15.43■□□□□ 0.06
COL6A1-204ENST00000486023 ERICH5Q6P6B1 374 aa15.43■□□□□ 0.06
COL6A1-204ENST00000486023 HIST3H2AQ7L7L0 130 aa15.43■□□□□ 0.06
COL6A1-204ENST00000486023 BIVMQ86UB2 503 aa15.43■□□□□ 0.06
COL6A1-204ENST00000486023 LRRC17Q8N6Y2 441 aa15.43■□□□□ 0.06
COL6A1-204ENST00000486023 OR2T12Q8NG77 320 aa15.43■□□□□ 0.06
COL6A1-204ENST00000486023 OR6N1Q8NGY5 312 aa15.43■□□□□ 0.06
COL6A1-204ENST00000486023 HTRA1Q92743 480 aa15.43■□□□□ 0.06
COL6A1-204ENST00000486023 HIST1H2ACQ93077 130 aa15.43■□□□□ 0.06
COL6A1-204ENST00000486023 ZNF837Q96EG3 531 aaPredicted RBP15.43■□□□□ 0.06
COL6A1-204ENST00000486023 SLC41A3Q96GZ6 507 aa15.43■□□□□ 0.06
COL6A1-204ENST00000486023 HS6ST2Q96MM7 605 aa15.43■□□□□ 0.06
COL6A1-204ENST00000486023 ZNF317Q96PQ6 595 aaPredicted RBP15.43■□□□□ 0.06
COL6A1-204ENST00000486023 DHRS9Q9BPW9 319 aa15.43■□□□□ 0.06
COL6A1-204ENST00000486023 LINC00470Q9BZP3 86 aa15.43■□□□□ 0.06
COL6A1-204ENST00000486023 FKRPQ9H9S5 495 aa15.43■□□□□ 0.06
COL6A1-204ENST00000486023 GPR35Q9HC97 309 aa15.43■□□□□ 0.06
COL6A1-204ENST00000486023 MRPL39Q9NYK5 338 aaKnown RBP15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms