RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 HLA-DOBP13765 273 aa15.66■□□□□ 0.1
CHMP3-207ENST00000485465 SLC6A6P31641 620 aa15.66■□□□□ 0.1
CHMP3-207ENST00000485465 RPL4P36578 427 aaKnown RBP15.66■□□□□ 0.1
CHMP3-207ENST00000485465 SLC16A1P53985 500 aa15.66■□□□□ 0.1
CHMP3-207ENST00000485465 RAD23AP54725 363 aa15.66■□□□□ 0.1
CHMP3-207ENST00000485465 CASP6P55212 293 aa15.66■□□□□ 0.1
CHMP3-207ENST00000485465 ESRRGP62508 458 aa15.66■□□□□ 0.1
CHMP3-207ENST00000485465 MRPL49Q13405 166 aaKnown RBP15.66■□□□□ 0.1
CHMP3-207ENST00000485465 NHLRC1Q6VVB1 395 aa15.66■□□□□ 0.1
CHMP3-207ENST00000485465 B3GNT6Q6ZMB0 384 aa15.66■□□□□ 0.1
CHMP3-207ENST00000485465 SEM1Q6ZVN7 128 aa15.66■□□□□ 0.1
CHMP3-207ENST00000485465 IGFN1Q86VF2 1251 aa15.66■□□□□ 0.1
CHMP3-207ENST00000485465 UEVLDQ8IX04 471 aa15.66■□□□□ 0.1
CHMP3-207ENST00000485465 C9orf106Q8NAJ2 232 aa15.66■□□□□ 0.1
CHMP3-207ENST00000485465 ANKK1Q8NFD2 765 aa15.66■□□□□ 0.1
CHMP3-207ENST00000485465 OR9K2Q8NGE7 335 aa15.66■□□□□ 0.1
CHMP3-207ENST00000485465 OR8D4Q8NGM9 314 aa15.66■□□□□ 0.1
CHMP3-207ENST00000485465 GPX7Q96SL4 187 aaPredicted RBP15.66■□□□□ 0.1
CHMP3-207ENST00000485465 VCXQ9H320 206 aa15.66■□□□□ 0.1
CHMP3-207ENST00000485465 VCX3BQ9H321 246 aa15.66■□□□□ 0.1
CHMP3-207ENST00000485465 RNF122Q9H9V4 155 aa15.66■□□□□ 0.1
CHMP3-207ENST00000485465 INIPQ9NRY2 104 aa15.66■□□□□ 0.1
CHMP3-207ENST00000485465 TBC1D23Q9NUY8 699 aa15.66■□□□□ 0.1
CHMP3-207ENST00000485465 KLHL9Q9P2J3 617 aa15.66■□□□□ 0.1
CHMP3-207ENST00000485465 IL20RAQ9UHF4 553 aa15.66■□□□□ 0.1
CHMP3-207ENST00000485465 ENOPH1Q9UHY7 261 aa15.66■□□□□ 0.1
CHMP3-207ENST00000485465 ING1Q9UK53 422 aaPredicted RBP15.66■□□□□ 0.1
CHMP3-207ENST00000485465 OSGIN2Q9Y236 505 aa15.66■□□□□ 0.1
CHMP3-207ENST00000485465 NOX1Q9Y5S8 564 aa15.66■□□□□ 0.1
CHMP3-207ENST00000485465 IGKV3D-15A0A087WSY6 115 aa15.65■□□□□ 0.1
CHMP3-207ENST00000485465 MBD3L4A6NDZ8 208 aaPredicted RBP15.65■□□□□ 0.1
CHMP3-207ENST00000485465 MBD3L3A6NE82 208 aaPredicted RBP15.65■□□□□ 0.1
CHMP3-207ENST00000485465 MBD3L5A6NJ08 208 aaPredicted RBP15.65■□□□□ 0.1
CHMP3-207ENST00000485465 MCIDASD6RGH6 385 aa15.65■□□□□ 0.1
CHMP3-207ENST00000485465 ZNF43P17038 809 aa15.65■□□□□ 0.1
CHMP3-207ENST00000485465 CDH2P19022 906 aaPredicted RBP15.65■□□□□ 0.1
CHMP3-207ENST00000485465 POU1F1P28069 291 aa15.65■□□□□ 0.1
CHMP3-207ENST00000485465 CRISP1P54107 249 aa15.65■□□□□ 0.1
CHMP3-207ENST00000485465 CTXN1P60606 82 aa15.65■□□□□ 0.1
CHMP3-207ENST00000485465 C1DQ13901 141 aaKnown RBP15.65■□□□□ 0.1
CHMP3-207ENST00000485465 SNCBQ16143 134 aa15.65■□□□□ 0.1
CHMP3-207ENST00000485465 IGFBP7Q16270 282 aa15.65■□□□□ 0.1
CHMP3-207ENST00000485465 DPY19L2P2Q6ZN68 376 aa15.65■□□□□ 0.1
CHMP3-207ENST00000485465 CREB3L2Q70SY1 520 aa15.65■□□□□ 0.1
CHMP3-207ENST00000485465 MCEMP1Q8IX19 187 aa15.65■□□□□ 0.1
CHMP3-207ENST00000485465 RPRMLQ8N4K4 120 aa15.65■□□□□ 0.1
CHMP3-207ENST00000485465 OR52L1Q8NGH7 329 aa15.65■□□□□ 0.1
CHMP3-207ENST00000485465 MBD3L2Q8NHZ7 208 aaPredicted RBP15.65■□□□□ 0.1
CHMP3-207ENST00000485465 TEX47Q8TBZ9 253 aa15.65■□□□□ 0.1
CHMP3-207ENST00000485465 TM9SF2Q99805 663 aa15.65■□□□□ 0.1
CHMP3-207ENST00000485465 TSSK6Q9BXA6 273 aa15.65■□□□□ 0.1
CHMP3-207ENST00000485465 GABARAPL3Q9BY60 117 aa15.65■□□□□ 0.1
CHMP3-207ENST00000485465 SH3BGRL2Q9UJC5 107 aa15.65■□□□□ 0.1
CHMP3-207ENST00000485465 TRGV8A0A0C4DH27 118 aa15.64■□□□□ 0.09
CHMP3-207ENST00000485465 A0A1W2PRG6 482 aa15.64■□□□□ 0.09
CHMP3-207ENST00000485465 DLGAP1O14490 977 aa15.64■□□□□ 0.09
CHMP3-207ENST00000485465 TRAF3IP2O43734 574 aaPredicted RBP15.64■□□□□ 0.09
CHMP3-207ENST00000485465 SERPINI2O75830 405 aa15.64■□□□□ 0.09
CHMP3-207ENST00000485465 PLGP00747 810 aaPredicted RBP15.64■□□□□ 0.09
CHMP3-207ENST00000485465 CD14P08571 375 aa15.64■□□□□ 0.09
CHMP3-207ENST00000485465 STSP08842 583 aa15.64■□□□□ 0.09
CHMP3-207ENST00000485465 GLI4P10075 376 aa15.64■□□□□ 0.09
CHMP3-207ENST00000485465 TIMP3P35625 211 aa15.64■□□□□ 0.09
CHMP3-207ENST00000485465 POLR2IP36954 125 aaKnown RBP15.64■□□□□ 0.09
CHMP3-207ENST00000485465 CA7P43166 264 aa15.64■□□□□ 0.09
CHMP3-207ENST00000485465 ERVK-25P63136 954 aa15.64■□□□□ 0.09
CHMP3-207ENST00000485465 POU3F1Q03052 451 aaPredicted RBP15.64■□□□□ 0.09
CHMP3-207ENST00000485465 NPRL3Q12980 569 aa15.64■□□□□ 0.09
CHMP3-207ENST00000485465 ZIK1Q3SY52 487 aaPredicted RBP15.64■□□□□ 0.09
CHMP3-207ENST00000485465 CLEC12AQ5QGZ9 265 aa15.64■□□□□ 0.09
CHMP3-207ENST00000485465 OR2A2Q6IF42 318 aa15.64■□□□□ 0.09
CHMP3-207ENST00000485465 ZIC4Q8N9L1 334 aa15.64■□□□□ 0.09
CHMP3-207ENST00000485465 GMPPAQ96IJ6 420 aaPredicted RBP15.64■□□□□ 0.09
CHMP3-207ENST00000485465 RDH12Q96NR8 316 aa15.64■□□□□ 0.09
CHMP3-207ENST00000485465 MBOAT4Q96T53 435 aa15.64■□□□□ 0.09
CHMP3-207ENST00000485465 TTYH2Q9BSA4 534 aa15.64■□□□□ 0.09
CHMP3-207ENST00000485465 KATNB1Q9BVA0 655 aa15.64■□□□□ 0.09
CHMP3-207ENST00000485465 IFT27Q9BW83 186 aa15.64■□□□□ 0.09
CHMP3-207ENST00000485465 TOR3AQ9H497 397 aa15.64■□□□□ 0.09
CHMP3-207ENST00000485465 RIBC2Q9H4K1 309 aa15.64■□□□□ 0.09
CHMP3-207ENST00000485465 BCO1Q9HAY6 547 aa15.64■□□□□ 0.09
CHMP3-207ENST00000485465 GP6Q9HCN6 339 aa15.64■□□□□ 0.09
CHMP3-207ENST00000485465 NRIP3Q9NQ35 241 aa15.64■□□□□ 0.09
CHMP3-207ENST00000485465 GLRX2Q9NS18 164 aa15.64■□□□□ 0.09
CHMP3-207ENST00000485465 SMPD3Q9NY59 655 aaPredicted RBP15.64■□□□□ 0.09
CHMP3-207ENST00000485465 RALYQ9UKM9 306 aaKnown RBP15.64■□□□□ 0.09
CHMP3-207ENST00000485465 CLEC4AQ9UMR7 237 aa15.64■□□□□ 0.09
CHMP3-207ENST00000485465 NPIPB13A6NJU9 1138 aa15.63■□□□□ 0.09
CHMP3-207ENST00000485465 ZNF724A8MTY0 619 aa15.63■□□□□ 0.09
CHMP3-207ENST00000485465 NPIPB4C9JG80 1138 aa15.63■□□□□ 0.09
CHMP3-207ENST00000485465 E9PLN8 166 aa15.63■□□□□ 0.09
CHMP3-207ENST00000485465 GPR171O14626 319 aa15.63■□□□□ 0.09
CHMP3-207ENST00000485465 PPP1R3DO95685 299 aa15.63■□□□□ 0.09
CHMP3-207ENST00000485465 SNAP29O95721 258 aa15.63■□□□□ 0.09
CHMP3-207ENST00000485465 IGHMP01871 453 aa15.63■□□□□ 0.09
CHMP3-207ENST00000485465 YES1P07947 543 aa15.63■□□□□ 0.09
CHMP3-207ENST00000485465 IFNGR1P15260 489 aa15.63■□□□□ 0.09
CHMP3-207ENST00000485465 VHLP40337 213 aa15.63■□□□□ 0.09
CHMP3-207ENST00000485465 GIPRP48546 466 aa15.63■□□□□ 0.09
CHMP3-207ENST00000485465 GINS1Q14691 196 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms