RNA–Protein interactions for RNA: ENST00000485275.2

LRIF1-202, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-202ENST00000485275 FANCFQ9NPI8 374 aa13.01□□□□□ -0.33
LRIF1-202ENST00000485275 CMC2Q9NRP2 79 aa13.01□□□□□ -0.33
LRIF1-202ENST00000485275 ALPK2Q86TB3 2170 aa13.01□□□□□ -0.33
LRIF1-202ENST00000485275 TLN1Q9Y490 2541 aaKnown RBP13□□□□□ -0.33
LRIF1-202ENST00000485275 TRGV5A0A0B4J1U4 118 aa13□□□□□ -0.33
LRIF1-202ENST00000485275 A0A1W2PNV4 684 aa13□□□□□ -0.33
LRIF1-202ENST00000485275 TMEM8BA6NDV4 472 aa13□□□□□ -0.33
LRIF1-202ENST00000485275 AQP7P3A6NL99 342 aa13□□□□□ -0.33
LRIF1-202ENST00000485275 SLC1A7O00341 560 aa13□□□□□ -0.33
LRIF1-202ENST00000485275 ARPC3O15145 178 aa13□□□□□ -0.33
LRIF1-202ENST00000485275 RNF13O43567 381 aa13□□□□□ -0.33
LRIF1-202ENST00000485275 CXCL13O43927 109 aa13□□□□□ -0.33
LRIF1-202ENST00000485275 ENTPD6O75354 484 aa13□□□□□ -0.33
LRIF1-202ENST00000485275 LYNP07948 512 aa13□□□□□ -0.33
LRIF1-202ENST00000485275 GTF2E2P29084 291 aaKnown RBP13□□□□□ -0.33
LRIF1-202ENST00000485275 SNRPGP62308 76 aaKnown RBP13□□□□□ -0.33
LRIF1-202ENST00000485275 CRMP1Q14194 572 aa13□□□□□ -0.33
LRIF1-202ENST00000485275 MELKQ14680 651 aa13□□□□□ -0.33
LRIF1-202ENST00000485275 MFSD13AQ14CX5 517 aa13□□□□□ -0.33
LRIF1-202ENST00000485275 TMEM201Q5SNT2 666 aa13□□□□□ -0.33
LRIF1-202ENST00000485275 PAQR6Q6TCH4 344 aa13□□□□□ -0.33
LRIF1-202ENST00000485275 SLC43A2Q8N370 569 aa13□□□□□ -0.33
LRIF1-202ENST00000485275 EXD3Q8N9H8 876 aa13□□□□□ -0.33
LRIF1-202ENST00000485275 CYB561A3Q8NBI2 242 aa13□□□□□ -0.33
LRIF1-202ENST00000485275 SDR9C7Q8NEX9 313 aa13□□□□□ -0.33
LRIF1-202ENST00000485275 OR8J1Q8NGP2 316 aa13□□□□□ -0.33
LRIF1-202ENST00000485275 OR4K13Q8NH42 304 aa13□□□□□ -0.33
LRIF1-202ENST00000485275 OR2V1Q8NHB1 315 aa13□□□□□ -0.33
LRIF1-202ENST00000485275 C9orf43Q8TAL5 461 aaPredicted RBP13□□□□□ -0.33
LRIF1-202ENST00000485275 ABTB1Q969K4 478 aaPredicted RBP13□□□□□ -0.33
LRIF1-202ENST00000485275 NR1H4Q96RI1 486 aaPredicted RBP13□□□□□ -0.33
LRIF1-202ENST00000485275 MED20Q9H944 212 aa13□□□□□ -0.33
LRIF1-202ENST00000485275 AMBNQ9NP70 447 aa13□□□□□ -0.33
LRIF1-202ENST00000485275 PLSCR2Q9NRY7 297 aa13□□□□□ -0.33
LRIF1-202ENST00000485275 ZMIZ1Q9ULJ6 1067 aa13□□□□□ -0.33
LRIF1-202ENST00000485275 B3GALT5Q9Y2C3 310 aa13□□□□□ -0.33
LRIF1-202ENST00000485275 MAP1BP46821 2468 aaKnown RBP13□□□□□ -0.33
LRIF1-202ENST00000485275 GJE1A6NN92 205 aa12.99□□□□□ -0.33
LRIF1-202ENST00000485275 LINC01387J3KSC0 135 aa12.99□□□□□ -0.33
LRIF1-202ENST00000485275 IGHMP01871 453 aa12.99□□□□□ -0.33
LRIF1-202ENST00000485275 CLUP10909 449 aa12.99□□□□□ -0.33
LRIF1-202ENST00000485275 EIF1AXP47813 144 aaKnown RBP12.99□□□□□ -0.33
LRIF1-202ENST00000485275 SLC35A1P78382 337 aa12.99□□□□□ -0.33
LRIF1-202ENST00000485275 POU3F1Q03052 451 aaPredicted RBP12.99□□□□□ -0.33
LRIF1-202ENST00000485275 SRYQ05066 204 aa12.99□□□□□ -0.33
LRIF1-202ENST00000485275 RUNX1T1Q06455 604 aa12.99□□□□□ -0.33
LRIF1-202ENST00000485275 ZP4Q12836 540 aa12.99□□□□□ -0.33
LRIF1-202ENST00000485275 ACKR1Q16570 336 aa12.99□□□□□ -0.33
LRIF1-202ENST00000485275 HBMQ6B0K9 141 aa12.99□□□□□ -0.33
LRIF1-202ENST00000485275 RPUSD3Q6P087 351 aaKnown RBP12.99□□□□□ -0.33
LRIF1-202ENST00000485275 ARHGAP11AQ6P4F7 1023 aa12.99□□□□□ -0.33
LRIF1-202ENST00000485275 GHDCQ8N2G8 530 aa12.99□□□□□ -0.33
LRIF1-202ENST00000485275 FAM26EQ8N5C1 309 aa12.99□□□□□ -0.33
LRIF1-202ENST00000485275 SLC37A3Q8NCC5 494 aa12.99□□□□□ -0.33
LRIF1-202ENST00000485275 ADPRHL1Q8NDY3 354 aa12.99□□□□□ -0.33
LRIF1-202ENST00000485275 ZNF519Q8TB69 540 aa12.99□□□□□ -0.33
LRIF1-202ENST00000485275 DTNBP1Q96EV8 351 aa12.99□□□□□ -0.33
LRIF1-202ENST00000485275 LRR1Q96L50 414 aa12.99□□□□□ -0.33
LRIF1-202ENST00000485275 SLC38A2Q96QD8 506 aa12.99□□□□□ -0.33
LRIF1-202ENST00000485275 DDOQ99489 341 aa12.99□□□□□ -0.33
LRIF1-202ENST00000485275 TIMP4Q99727 224 aa12.99□□□□□ -0.33
LRIF1-202ENST00000485275 FN3KQ9H479 309 aa12.99□□□□□ -0.33
LRIF1-202ENST00000485275 INIPQ9NRY2 104 aa12.99□□□□□ -0.33
LRIF1-202ENST00000485275 KLHL13Q9P2N7 655 aa12.99□□□□□ -0.33
LRIF1-202ENST00000485275 ZNF346Q9UL40 294 aaKnown RBP12.99□□□□□ -0.33
LRIF1-202ENST00000485275 ACACBO00763 2458 aa12.99□□□□□ -0.33
LRIF1-202ENST00000485275 TRIM64A6NGJ6 449 aa12.99□□□□□ -0.33
LRIF1-202ENST00000485275 NPIPA5E9PKD4 350 aa12.99□□□□□ -0.33
LRIF1-202ENST00000485275 H7C1C5 153 aa12.99□□□□□ -0.33
LRIF1-202ENST00000485275 TRAF3IP2O43734 574 aaPredicted RBP12.99□□□□□ -0.33
LRIF1-202ENST00000485275 TXNDC12O95881 172 aa12.99□□□□□ -0.33
LRIF1-202ENST00000485275 ADRA2AP08913 450 aa12.99□□□□□ -0.33
LRIF1-202ENST00000485275 CRHBPP24387 322 aa12.99□□□□□ -0.33
LRIF1-202ENST00000485275 SDHAP31040 664 aa12.99□□□□□ -0.33
LRIF1-202ENST00000485275 CDKN2AP42771 156 aaKnown RBP12.99□□□□□ -0.33
LRIF1-202ENST00000485275 RAC3P60763 192 aa12.99□□□□□ -0.33
LRIF1-202ENST00000485275 LCN6P62502 163 aa12.99□□□□□ -0.33
LRIF1-202ENST00000485275 AADACL4Q5VUY2 407 aa12.99□□□□□ -0.33
LRIF1-202ENST00000485275 OR52E2Q8NGJ4 325 aa12.99□□□□□ -0.33
LRIF1-202ENST00000485275 TRUB1Q8WWH5 349 aaKnown RBP12.99□□□□□ -0.33
LRIF1-202ENST00000485275 HDAC2Q92769 488 aaKnown RBP12.99□□□□□ -0.33
LRIF1-202ENST00000485275 TXNDC15Q96J42 360 aa12.99□□□□□ -0.33
LRIF1-202ENST00000485275 ZNF582Q96NG8 517 aaPredicted RBP12.99□□□□□ -0.33
LRIF1-202ENST00000485275 NMNAT3Q96T66 252 aa12.99□□□□□ -0.33
LRIF1-202ENST00000485275 LDAHQ9H6V9 325 aa12.99□□□□□ -0.33
LRIF1-202ENST00000485275 MED29Q9NX70 200 aa12.99□□□□□ -0.33
LRIF1-202ENST00000485275 NPIPA1Q9UND3 350 aa12.99□□□□□ -0.33
LRIF1-202ENST00000485275 BAIAP2Q9UQB8 552 aa12.99□□□□□ -0.33
LRIF1-202ENST00000485275 OR6C68A6NDL8 312 aa12.98□□□□□ -0.33
LRIF1-202ENST00000485275 KDM4EB2RXH2 506 aaPredicted RBP12.98□□□□□ -0.33
LRIF1-202ENST00000485275 ACTL6AO96019 429 aa12.98□□□□□ -0.33
LRIF1-202ENST00000485275 HMGN1P05114 100 aa12.98□□□□□ -0.33
LRIF1-202ENST00000485275 HTR1AP08908 422 aa12.98□□□□□ -0.33
LRIF1-202ENST00000485275 SMIM18P0DKX4 95 aa12.98□□□□□ -0.33
LRIF1-202ENST00000485275 APEHP13798 732 aaKnown RBP12.98□□□□□ -0.33
LRIF1-202ENST00000485275 IFNGR1P15260 489 aa12.98□□□□□ -0.33
LRIF1-202ENST00000485275 AGFG1P52594 562 aaKnown RBP12.98□□□□□ -0.33
LRIF1-202ENST00000485275 CDH15P55291 814 aa12.98□□□□□ -0.33
LRIF1-202ENST00000485275 CSNK2A1P68400 391 aaPredicted RBP12.98□□□□□ -0.33
LRIF1-202ENST00000485275 PIGFQ07326 219 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms