RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 CHN2P52757 468 aa12.01□□□□□ -0.49
VARS-226ENST00000483275 SQLEQ14534 574 aa12.01□□□□□ -0.49
VARS-226ENST00000483275 LARS2Q15031 903 aaKnown RBP12.01□□□□□ -0.49
VARS-226ENST00000483275 TNFAIP8L3Q5GJ75 292 aa12.01□□□□□ -0.49
VARS-226ENST00000483275 GPR137CQ8N3F9 429 aa12.01□□□□□ -0.49
VARS-226ENST00000483275 GOLGA6L1Q8N7Z2 621 aa12.01□□□□□ -0.49
VARS-226ENST00000483275 NUP37Q8NFH4 326 aa12.01□□□□□ -0.49
VARS-226ENST00000483275 MAGEE2Q8TD90 523 aaPredicted RBP12.01□□□□□ -0.49
VARS-226ENST00000483275 MGARPQ8TDB4 240 aa12.01□□□□□ -0.49
VARS-226ENST00000483275 OR2M2Q96R28 347 aa12.01□□□□□ -0.49
VARS-226ENST00000483275 SYT3Q9BQG1 590 aa12.01□□□□□ -0.49
VARS-226ENST00000483275 EMC6Q9BV81 110 aa12.01□□□□□ -0.49
VARS-226ENST00000483275 SPATA9Q9BWV2 254 aa12.01□□□□□ -0.49
VARS-226ENST00000483275 LINC00470Q9BZP3 86 aa12.01□□□□□ -0.49
VARS-226ENST00000483275 PIF1Q9H611 641 aa12.01□□□□□ -0.49
VARS-226ENST00000483275 ZNF442Q9H7R0 627 aa12.01□□□□□ -0.49
VARS-226ENST00000483275 TMBIM4Q9HC24 238 aa12.01□□□□□ -0.49
VARS-226ENST00000483275 TMEFF2Q9UIK5 374 aaPredicted RBP12.01□□□□□ -0.49
VARS-226ENST00000483275 IGKV1D-42A0A075B6H8 117 aa12□□□□□ -0.49
VARS-226ENST00000483275 TRAF3IP2O43734 574 aaPredicted RBP12□□□□□ -0.49
VARS-226ENST00000483275 SNUPNO95149 360 aaKnown RBP12□□□□□ -0.49
VARS-226ENST00000483275 VAMP5O95183 116 aa12□□□□□ -0.49
VARS-226ENST00000483275 HPRP00739 348 aa12□□□□□ -0.49
VARS-226ENST00000483275 TACSTD2P09758 323 aa12□□□□□ -0.49
VARS-226ENST00000483275 CD79AP11912 226 aa12□□□□□ -0.49
VARS-226ENST00000483275 HLA-DOBP13765 273 aa12□□□□□ -0.49
VARS-226ENST00000483275 CBR1P16152 277 aa12□□□□□ -0.49
VARS-226ENST00000483275 ZNF43P17038 809 aa12□□□□□ -0.49
VARS-226ENST00000483275 GRPRP30550 384 aa12□□□□□ -0.49
VARS-226ENST00000483275 AQP5P55064 265 aa12□□□□□ -0.49
VARS-226ENST00000483275 CDH15P55291 814 aa12□□□□□ -0.49
VARS-226ENST00000483275 SH3BGRP55822 239 aaPredicted RBP12□□□□□ -0.49
VARS-226ENST00000483275 MAGOHP61326 146 aaKnown RBP12□□□□□ -0.49
VARS-226ENST00000483275 TXNL4AP83876 142 aaKnown RBP12□□□□□ -0.49
VARS-226ENST00000483275 PIGFQ07326 219 aa12□□□□□ -0.49
VARS-226ENST00000483275 C1DQ13901 141 aaKnown RBP12□□□□□ -0.49
VARS-226ENST00000483275 DAG1Q14118 895 aa12□□□□□ -0.49
VARS-226ENST00000483275 MAD2L1BPQ15013 274 aaPredicted RBP12□□□□□ -0.49
VARS-226ENST00000483275 ZNF311Q5JNZ3 666 aa12□□□□□ -0.49
VARS-226ENST00000483275 C6orf10Q5SRN2 563 aa12□□□□□ -0.49
VARS-226ENST00000483275 MAVSQ7Z434 540 aa12□□□□□ -0.49
VARS-226ENST00000483275 KIRREL3Q8IZU9 778 aa12□□□□□ -0.49
VARS-226ENST00000483275 TMEM123Q8N131 208 aa12□□□□□ -0.49
VARS-226ENST00000483275 LINC01356Q8N9X3 169 aa12□□□□□ -0.49
VARS-226ENST00000483275 ZNF540Q8NDQ6 660 aa12□□□□□ -0.49
VARS-226ENST00000483275 MFSD8Q8NHS3 518 aa12□□□□□ -0.49
VARS-226ENST00000483275 STK35Q8TDR2 534 aa12□□□□□ -0.49
VARS-226ENST00000483275 UBASH3BQ8TF42 649 aa12□□□□□ -0.49
VARS-226ENST00000483275 TAAR8Q969N4 342 aa12□□□□□ -0.49
VARS-226ENST00000483275 MRPL37Q9BZE1 423 aaKnown RBP12□□□□□ -0.49
VARS-226ENST00000483275 TPT1P8Q9HAU6 139 aa12□□□□□ -0.49
VARS-226ENST00000483275 MYEF2Q9P2K5 600 aaKnown RBP12□□□□□ -0.49
VARS-226ENST00000483275 RCE1Q9Y256 329 aa12□□□□□ -0.49
VARS-226ENST00000483275 TMEM120BA0PK00 339 aa11.99□□□□□ -0.49
VARS-226ENST00000483275 WNT9BO14905 357 aa11.99□□□□□ -0.49
VARS-226ENST00000483275 SLC22A3O75751 556 aa11.99□□□□□ -0.49
VARS-226ENST00000483275 SERPINI2O75830 405 aa11.99□□□□□ -0.49
VARS-226ENST00000483275 VENTXO95231 258 aa11.99□□□□□ -0.49
VARS-226ENST00000483275 ERCC1P07992 297 aaPredicted RBP11.99□□□□□ -0.49
VARS-226ENST00000483275 B4GALT1P15291 398 aa11.99□□□□□ -0.49
VARS-226ENST00000483275 ALDH3B1P43353 468 aa11.99□□□□□ -0.49
VARS-226ENST00000483275 RIN1Q13671 783 aa11.99□□□□□ -0.49
VARS-226ENST00000483275 C3orf36Q3SXR2 165 aa11.99□□□□□ -0.49
VARS-226ENST00000483275 SLC9B1Q4ZJI4 515 aa11.99□□□□□ -0.49
VARS-226ENST00000483275 C1QTNF12Q5T7M4 302 aa11.99□□□□□ -0.49
VARS-226ENST00000483275 LIPNQ5VXI9 398 aa11.99□□□□□ -0.49
VARS-226ENST00000483275 THSD4Q6ZMP0 1018 aa11.99□□□□□ -0.49
VARS-226ENST00000483275 HDXQ7Z353 690 aa11.99□□□□□ -0.49
VARS-226ENST00000483275 LRP11Q86VZ4 500 aa11.99□□□□□ -0.49
VARS-226ENST00000483275 ZNF786Q8N393 782 aa11.99□□□□□ -0.49
VARS-226ENST00000483275 RNF217Q8TC41 542 aa11.99□□□□□ -0.49
VARS-226ENST00000483275 OXGR1Q96P68 337 aa11.99□□□□□ -0.49
VARS-226ENST00000483275 METTL17Q9H7H0 456 aaPredicted RBP11.99□□□□□ -0.49
VARS-226ENST00000483275 CALML5Q9NZT1 146 aa11.99□□□□□ -0.49
VARS-226ENST00000483275 PKD1L1Q8TDX9 2849 aa11.98□□□□□ -0.49
VARS-226ENST00000483275 MGAM2Q2M2H8 2515 aa11.98□□□□□ -0.49
VARS-226ENST00000483275 A0A096LPI6 279 aa11.98□□□□□ -0.49
VARS-226ENST00000483275 A0A1B0GWA3 101 aa11.98□□□□□ -0.49
VARS-226ENST00000483275 LRRN3E7EW58 273 aa11.98□□□□□ -0.49
VARS-226ENST00000483275 RPL36A-HNRNPH2H7BZ11 118 aa11.98□□□□□ -0.49
VARS-226ENST00000483275 AIM2O14862 343 aa11.98□□□□□ -0.49
VARS-226ENST00000483275 HDAC3O15379 428 aa11.98□□□□□ -0.49
VARS-226ENST00000483275 HPXP02790 462 aa11.98□□□□□ -0.49
VARS-226ENST00000483275 SEC24CP53992 1094 aa11.98□□□□□ -0.49
VARS-226ENST00000483275 WDR4P57081 412 aaKnown RBP11.98□□□□□ -0.49
VARS-226ENST00000483275 ALKBH6Q3KRA9 238 aa11.98□□□□□ -0.49
VARS-226ENST00000483275 GLIPR1L2Q4G1C9 344 aa11.98□□□□□ -0.49
VARS-226ENST00000483275 PDCD4Q53EL6 469 aaKnown RBP11.98□□□□□ -0.49
VARS-226ENST00000483275 AGBL2Q5U5Z8 902 aa11.98□□□□□ -0.49
VARS-226ENST00000483275 SLC2A7Q6PXP3 512 aa11.98□□□□□ -0.49
VARS-226ENST00000483275 C10orf111Q8N326 155 aa11.98□□□□□ -0.49
VARS-226ENST00000483275 RFLNBQ8N5W9 214 aa11.98□□□□□ -0.49
VARS-226ENST00000483275 FAM169BQ8N8A8 192 aa11.98□□□□□ -0.49
VARS-226ENST00000483275 NEU4Q8WWR8 484 aaPredicted RBP11.98□□□□□ -0.49
VARS-226ENST00000483275 ANKRD27Q96NW4 1050 aa11.98□□□□□ -0.49
VARS-226ENST00000483275 ZNF317Q96PQ6 595 aaPredicted RBP11.98□□□□□ -0.49
VARS-226ENST00000483275 OR52B2Q96RD2 323 aa11.98□□□□□ -0.49
VARS-226ENST00000483275 OCEL1Q9H607 264 aa11.98□□□□□ -0.49
VARS-226ENST00000483275 CACYBPQ9HB71 228 aaKnown RBP11.98□□□□□ -0.49
VARS-226ENST00000483275 MED29Q9NX70 200 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms