RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 ASAH2BP0C7U1 165 aa18.46■□□□□ 0.55
SEC13-217ENST00000482647 ADORA3P0DMS8 318 aa18.46■□□□□ 0.55
SEC13-217ENST00000482647 COX5AP20674 150 aa18.46■□□□□ 0.55
SEC13-217ENST00000482647 ATP6V1B2P21281 511 aa18.46■□□□□ 0.55
SEC13-217ENST00000482647 IGHV1-2P23083 117 aa18.46■□□□□ 0.55
SEC13-217ENST00000482647 VLDLRP98155 873 aa18.46■□□□□ 0.55
SEC13-217ENST00000482647 FAPQ12884 760 aa18.46■□□□□ 0.55
SEC13-217ENST00000482647 TSC22D1Q15714 1073 aa18.46■□□□□ 0.55
SEC13-217ENST00000482647 TSPO2Q5TGU0 170 aa18.46■□□□□ 0.55
SEC13-217ENST00000482647 NIPAL3Q6P499 406 aa18.46■□□□□ 0.55
SEC13-217ENST00000482647 BHLHA15Q7RTS1 189 aaPredicted RBP18.46■□□□□ 0.55
SEC13-217ENST00000482647 RNF113BQ8IZP6 322 aaKnown RBP18.46■□□□□ 0.55
SEC13-217ENST00000482647 LIPHQ8WWY8 451 aa18.46■□□□□ 0.55
SEC13-217ENST00000482647 ACOT11Q8WXI4 607 aaPredicted RBP18.46■□□□□ 0.55
SEC13-217ENST00000482647 POP5Q969H6 163 aaKnown RBP18.46■□□□□ 0.55
SEC13-217ENST00000482647 SLC7A6OSQ96CW6 309 aaPredicted RBP18.46■□□□□ 0.55
SEC13-217ENST00000482647 ASB9Q96DX5 294 aa18.46■□□□□ 0.55
SEC13-217ENST00000482647 CLPTM1LQ96KA5 538 aa18.46■□□□□ 0.55
SEC13-217ENST00000482647 PIP5K1AQ99755 562 aa18.46■□□□□ 0.55
SEC13-217ENST00000482647 SLC7A10Q9NS82 523 aa18.46■□□□□ 0.55
SEC13-217ENST00000482647 MPDZO75970 2070 aa18.46■□□□□ 0.55
SEC13-217ENST00000482647 A0A1W2PRQ8 180 aa18.45■□□□□ 0.54
SEC13-217ENST00000482647 TRAF3IP2O43734 574 aaPredicted RBP18.45■□□□□ 0.54
SEC13-217ENST00000482647 CTAG2O75638 210 aa18.45■□□□□ 0.54
SEC13-217ENST00000482647 ATP5HO75947 161 aa18.45■□□□□ 0.54
SEC13-217ENST00000482647 LYZL6O75951 148 aa18.45■□□□□ 0.54
SEC13-217ENST00000482647 GOSR1O95249 250 aa18.45■□□□□ 0.54
SEC13-217ENST00000482647 FUT4P22083 530 aa18.45■□□□□ 0.54
SEC13-217ENST00000482647 DNAJA1P31689 397 aaKnown RBP18.45■□□□□ 0.54
SEC13-217ENST00000482647 SELENOPP49908 381 aa18.45■□□□□ 0.54
SEC13-217ENST00000482647 RASSF2P50749 326 aa18.45■□□□□ 0.54
SEC13-217ENST00000482647 MS4A2Q01362 244 aa18.45■□□□□ 0.54
SEC13-217ENST00000482647 POU3F1Q03052 451 aaPredicted RBP18.45■□□□□ 0.54
SEC13-217ENST00000482647 ZP4Q12836 540 aa18.45■□□□□ 0.54
SEC13-217ENST00000482647 DGCR6Q14129 220 aa18.45■□□□□ 0.54
SEC13-217ENST00000482647 LCN8Q6JVE9 175 aa18.45■□□□□ 0.54
SEC13-217ENST00000482647 ZNF730Q6ZMV8 503 aa18.45■□□□□ 0.54
SEC13-217ENST00000482647 RRM2BQ7LG56 351 aa18.45■□□□□ 0.54
SEC13-217ENST00000482647 SLC46A3Q7Z3Q1 461 aa18.45■□□□□ 0.54
SEC13-217ENST00000482647 NANOGNBQ7Z5D8 188 aa18.45■□□□□ 0.54
SEC13-217ENST00000482647 ABHD12BQ7Z5M8 362 aaPredicted RBP18.45■□□□□ 0.54
SEC13-217ENST00000482647 TMEM200AQ86VY9 491 aa18.45■□□□□ 0.54
SEC13-217ENST00000482647 CDK20Q8IZL9 346 aa18.45■□□□□ 0.54
SEC13-217ENST00000482647 ZNF433Q8N7K0 673 aaPredicted RBP18.45■□□□□ 0.54
SEC13-217ENST00000482647 ANKK1Q8NFD2 765 aa18.45■□□□□ 0.54
SEC13-217ENST00000482647 HSD17B8Q92506 261 aa18.45■□□□□ 0.54
SEC13-217ENST00000482647 CCDC124Q96CT7 223 aaKnown RBP18.45■□□□□ 0.54
SEC13-217ENST00000482647 BPIFA2Q96DR5 249 aa18.45■□□□□ 0.54
SEC13-217ENST00000482647 ZC3HAV1LQ96H79 300 aaKnown RBP18.45■□□□□ 0.54
SEC13-217ENST00000482647 IL1RAPQ9NPH3 570 aa18.45■□□□□ 0.54
SEC13-217ENST00000482647 TAS2R5Q9NYW4 299 aa18.45■□□□□ 0.54
SEC13-217ENST00000482647 FAM221AA4D161 298 aa18.44■□□□□ 0.54
SEC13-217ENST00000482647 CYSRT1A8MQ03 144 aa18.44■□□□□ 0.54
SEC13-217ENST00000482647 BLOC1S5-TXNDC5H3BN57 136 aa18.44■□□□□ 0.54
SEC13-217ENST00000482647 RNF13O43567 381 aa18.44■□□□□ 0.54
SEC13-217ENST00000482647 DNAJC8O75937 253 aaPredicted RBP18.44■□□□□ 0.54
SEC13-217ENST00000482647 ZNF432O94892 652 aa18.44■□□□□ 0.54
SEC13-217ENST00000482647 FABP3P05413 133 aa18.44■□□□□ 0.54
SEC13-217ENST00000482647 IFI30P13284 250 aa18.44■□□□□ 0.54
SEC13-217ENST00000482647 HLA-DOBP13765 273 aa18.44■□□□□ 0.54
SEC13-217ENST00000482647 SMIM11AP58511 58 aa18.44■□□□□ 0.54
SEC13-217ENST00000482647 FBXW10Q5XX13 1052 aa18.44■□□□□ 0.54
SEC13-217ENST00000482647 C22orf34Q6ZV56 151 aa18.44■□□□□ 0.54
SEC13-217ENST00000482647 MBOAT2Q6ZWT7 520 aa18.44■□□□□ 0.54
SEC13-217ENST00000482647 NRMQ8IXM6 262 aa18.44■□□□□ 0.54
SEC13-217ENST00000482647 LRGUKQ96M69 825 aa18.44■□□□□ 0.54
SEC13-217ENST00000482647 RASSF1Q9NS23 344 aa18.44■□□□□ 0.54
SEC13-217ENST00000482647 TAS2R16Q9NYV7 291 aa18.44■□□□□ 0.54
SEC13-217ENST00000482647 A0A087WUU8 490 aa18.43■□□□□ 0.54
SEC13-217ENST00000482647 CIB4A0PJX0 185 aa18.43■□□□□ 0.54
SEC13-217ENST00000482647 ZNF726A6NNF4 738 aa18.43■□□□□ 0.54
SEC13-217ENST00000482647 C11orf98E9PRG8 122 aa18.43■□□□□ 0.54
SEC13-217ENST00000482647 PDLIM1O00151 329 aa18.43■□□□□ 0.54
SEC13-217ENST00000482647 PIP5K1CO60331 668 aa18.43■□□□□ 0.54
SEC13-217ENST00000482647 SLC43A1O75387 559 aa18.43■□□□□ 0.54
SEC13-217ENST00000482647 DIRAS1O95057 198 aa18.43■□□□□ 0.54
SEC13-217ENST00000482647 THBDP07204 575 aa18.43■□□□□ 0.54
SEC13-217ENST00000482647 CRYGSP22914 178 aa18.43■□□□□ 0.54
SEC13-217ENST00000482647 TGFBR3Q03167 851 aa18.43■□□□□ 0.54
SEC13-217ENST00000482647 PRKCDQ05655 676 aa18.43■□□□□ 0.54
SEC13-217ENST00000482647 TRAP1Q12931 704 aaKnown RBP18.43■□□□□ 0.54
SEC13-217ENST00000482647 IQCCQ4KMZ1 466 aa18.43■□□□□ 0.54
SEC13-217ENST00000482647 OR7E24Q6IFN5 339 aa18.43■□□□□ 0.54
SEC13-217ENST00000482647 NHLRC1Q6VVB1 395 aa18.43■□□□□ 0.54
SEC13-217ENST00000482647 P2RY8Q86VZ1 359 aa18.43■□□□□ 0.54
SEC13-217ENST00000482647 SLC7A13Q8TCU3 470 aa18.43■□□□□ 0.54
SEC13-217ENST00000482647 OR2M2Q96R28 347 aa18.43■□□□□ 0.54
SEC13-217ENST00000482647 ZNF347Q96SE7 839 aa18.43■□□□□ 0.54
SEC13-217ENST00000482647 LINC00470Q9BZP3 86 aa18.43■□□□□ 0.54
SEC13-217ENST00000482647 TRIM15Q9C019 465 aa18.43■□□□□ 0.54
SEC13-217ENST00000482647 ZNF587BE7ETH6 402 aa18.42■□□□□ 0.54
SEC13-217ENST00000482647 UPK3AO75631 287 aa18.42■□□□□ 0.54
SEC13-217ENST00000482647 SERPINI2O75830 405 aa18.42■□□□□ 0.54
SEC13-217ENST00000482647 MPGP29372 298 aa18.42■□□□□ 0.54
SEC13-217ENST00000482647 LSM11P83369 360 aaKnown RBP eCLIP18.42■□□□□ 0.54
SEC13-217ENST00000482647 FGD3Q5JSP0 725 aa18.42■□□□□ 0.54
SEC13-217ENST00000482647 PGM2L1Q6PCE3 622 aa18.42■□□□□ 0.54
SEC13-217ENST00000482647 PODNL1Q6PEZ8 512 aa18.42■□□□□ 0.54
SEC13-217ENST00000482647 TBPL2Q6SJ96 375 aa18.42■□□□□ 0.54
SEC13-217ENST00000482647 SSX8Q7RTT4 187 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms