RNA–Protein interactions for RNA: ENST00000482280.1

MSH5-215, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 944 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-215ENST00000482280 CHP2O43745 196 aa17.41■□□□□ 0.38
MSH5-215ENST00000482280 UPK3AO75631 287 aa17.41■□□□□ 0.38
MSH5-215ENST00000482280 LY6G6DO95868 133 aa17.41■□□□□ 0.38
MSH5-215ENST00000482280 MT-ATP6P00846 226 aa17.41■□□□□ 0.38
MSH5-215ENST00000482280 CRYAAP02489 173 aa17.41■□□□□ 0.38
MSH5-215ENST00000482280 HOXB1P14653 301 aaPredicted RBP17.41■□□□□ 0.38
MSH5-215ENST00000482280 NUDT6P53370 316 aa17.41■□□□□ 0.38
MSH5-215ENST00000482280 SF3A3Q12874 501 aaKnown RBP eCLIP17.41■□□□□ 0.383e-7■□□□□ 10.5
MSH5-215ENST00000482280 RAB35Q15286 201 aa17.41■□□□□ 0.38
MSH5-215ENST00000482280 DUSP7Q16829 419 aa17.41■□□□□ 0.38
MSH5-215ENST00000482280 VMACQ2NL98 169 aa17.41■□□□□ 0.38
MSH5-215ENST00000482280 COQ5Q5HYK3 327 aa17.41■□□□□ 0.38
MSH5-215ENST00000482280 NANOGP8Q6NSW7 305 aa17.41■□□□□ 0.38
MSH5-215ENST00000482280 TTC33Q6PID6 262 aaPredicted RBP17.41■□□□□ 0.38
MSH5-215ENST00000482280 OR8J3Q8NGG0 315 aa17.41■□□□□ 0.38
MSH5-215ENST00000482280 POM121Q96HA1 1249 aa17.41■□□□□ 0.38
MSH5-215ENST00000482280 CACNG6Q9BXT2 260 aa17.41■□□□□ 0.38
MSH5-215ENST00000482280 NANOGQ9H9S0 305 aa17.41■□□□□ 0.38
MSH5-215ENST00000482280 SEC14L4Q9UDX3 406 aa17.41■□□□□ 0.38
MSH5-215ENST00000482280 NOX1Q9Y5S8 564 aa17.41■□□□□ 0.38
MSH5-215ENST00000482280 PMF1-BGLAPU3KQ54 211 aa17.41■□□□□ 0.38
MSH5-215ENST00000482280 LOC102725191A0A1B0GVB3 256 aa17.4■□□□□ 0.38
MSH5-215ENST00000482280 HIST1H2ABP04908 130 aa17.4■□□□□ 0.38
MSH5-215ENST00000482280 PTNP21246 168 aa17.4■□□□□ 0.38
MSH5-215ENST00000482280 CAPZA2P47755 286 aa17.4■□□□□ 0.38
MSH5-215ENST00000482280 POU3F1Q03052 451 aaPredicted RBP17.4■□□□□ 0.38
MSH5-215ENST00000482280 LGALS3BPQ08380 585 aa17.4■□□□□ 0.38
MSH5-215ENST00000482280 PUDPQ08623 228 aa17.4■□□□□ 0.38
MSH5-215ENST00000482280 TNK1Q13470 666 aa17.4■□□□□ 0.38
MSH5-215ENST00000482280 ENTPD8Q5MY95 495 aa17.4■□□□□ 0.38
MSH5-215ENST00000482280 ERICH5Q6P6B1 374 aa17.4■□□□□ 0.38
MSH5-215ENST00000482280 HIST3H2AQ7L7L0 130 aa17.4■□□□□ 0.38
MSH5-215ENST00000482280 MAGEE2Q8TD90 523 aaPredicted RBP17.4■□□□□ 0.38
MSH5-215ENST00000482280 HIST1H2ACQ93077 130 aa17.4■□□□□ 0.38
MSH5-215ENST00000482280 LRRC58Q96CX6 371 aa17.4■□□□□ 0.38
MSH5-215ENST00000482280 BOD1Q96IK1 185 aa17.4■□□□□ 0.38
MSH5-215ENST00000482280 SLC38A2Q96QD8 506 aa17.4■□□□□ 0.38
MSH5-215ENST00000482280 MRPL39Q9NYK5 338 aaKnown RBP17.4■□□□□ 0.38
MSH5-215ENST00000482280 BAG5Q9UL15 447 aa17.4■□□□□ 0.38
MSH5-215ENST00000482280 MOKQ9UQ07 419 aa17.4■□□□□ 0.38
MSH5-215ENST00000482280 FLNAP21333 2647 aaKnown RBP17.4■□□□□ 0.38
MSH5-215ENST00000482280 ARID1AO14497 2285 aa17.39■□□□□ 0.37
MSH5-215ENST00000482280 TRAPPC13A5PLN9 417 aa17.39■□□□□ 0.37
MSH5-215ENST00000482280 VSTM5A8MXK1 200 aa17.39■□□□□ 0.37
MSH5-215ENST00000482280 ATP6V1G2-DDX39BF2Z307 99 aa17.39■□□□□ 0.37
MSH5-215ENST00000482280 SERPINI2O75830 405 aa17.39■□□□□ 0.37
MSH5-215ENST00000482280 TP53P04637 393 aaPredicted RBP17.39■□□□□ 0.37
MSH5-215ENST00000482280 APOBEC3AP31941 199 aaPredicted RBP17.39■□□□□ 0.37
MSH5-215ENST00000482280 ACVR1BP36896 505 aa17.39■□□□□ 0.37
MSH5-215ENST00000482280 SLC25A3Q00325 362 aa17.39■□□□□ 0.37
MSH5-215ENST00000482280 KLF10Q13118 480 aa17.39■□□□□ 0.37
MSH5-215ENST00000482280 CARD17Q5XLA6 110 aa17.39■□□□□ 0.37
MSH5-215ENST00000482280 REP15Q6BDI9 236 aa17.39■□□□□ 0.37
MSH5-215ENST00000482280 CCDC36Q8IYA8 594 aa17.39■□□□□ 0.37
MSH5-215ENST00000482280 OR6T1Q8NGN1 323 aa17.39■□□□□ 0.37
MSH5-215ENST00000482280 OR6N1Q8NGY5 312 aa17.39■□□□□ 0.37
MSH5-215ENST00000482280 ADAMTS16Q8TE57 1224 aa17.39■□□□□ 0.37
MSH5-215ENST00000482280 BCL2L2Q92843 193 aaPredicted RBP17.39■□□□□ 0.37
MSH5-215ENST00000482280 RHNO1Q9BSD3 238 aa17.39■□□□□ 0.37
MSH5-215ENST00000482280 CRLF2Q9HC73 371 aa17.39■□□□□ 0.37
MSH5-215ENST00000482280 MED4Q9NPJ6 270 aa17.39■□□□□ 0.37
MSH5-215ENST00000482280 B3GAT1Q9P2W7 334 aa17.39■□□□□ 0.37
MSH5-215ENST00000482280 CAPN7Q9Y6W3 813 aa17.39■□□□□ 0.37
MSH5-215ENST00000482280 MTORP42345 2549 aa17.39■□□□□ 0.37
MSH5-215ENST00000482280 ARPC4-TTLL3A0A0A6YYG9 625 aa17.38■□□□□ 0.37
MSH5-215ENST00000482280 LOC100653049A0A140TA62 436 aa17.38■□□□□ 0.37
MSH5-215ENST00000482280 RPL36A-HNRNPH2H7BZ11 118 aa17.38■□□□□ 0.37
MSH5-215ENST00000482280 M0R3G1 203 aa17.38■□□□□ 0.37
MSH5-215ENST00000482280 FBP2O00757 339 aa17.38■□□□□ 0.37
MSH5-215ENST00000482280 SSX4O60224 188 aa17.38■□□□□ 0.37
MSH5-215ENST00000482280 FZD7O75084 574 aa17.38■□□□□ 0.37
MSH5-215ENST00000482280 KRT34O76011 436 aa17.38■□□□□ 0.37
MSH5-215ENST00000482280 ZNF432O94892 652 aa17.38■□□□□ 0.37
MSH5-215ENST00000482280 CD8AP01732 235 aa17.38■□□□□ 0.37
MSH5-215ENST00000482280 IGHV4-39P01824 125 aa17.38■□□□□ 0.37
MSH5-215ENST00000482280 ADORA3P0DMS8 318 aa17.38■□□□□ 0.37
MSH5-215ENST00000482280 UMPSP11172 480 aa17.38■□□□□ 0.37
MSH5-215ENST00000482280 ARF1P84077 181 aaKnown RBP17.38■□□□□ 0.37
MSH5-215ENST00000482280 GUCY1A3Q02108 690 aa17.38■□□□□ 0.37
MSH5-215ENST00000482280 CEACAM16Q2WEN9 425 aa17.38■□□□□ 0.37
MSH5-215ENST00000482280 RABL3Q5HYI8 236 aa17.38■□□□□ 0.37
MSH5-215ENST00000482280 CLEC2AQ6UVW9 174 aa17.38■□□□□ 0.37
MSH5-215ENST00000482280 OR5J2Q8NH18 312 aa17.38■□□□□ 0.37
MSH5-215ENST00000482280 SLC41A3Q96GZ6 507 aa17.38■□□□□ 0.37
MSH5-215ENST00000482280 MPP4Q96JB8 637 aa17.38■□□□□ 0.37
MSH5-215ENST00000482280 OR2M2Q96R28 347 aa17.38■□□□□ 0.37
MSH5-215ENST00000482280 KATNB1Q9BVA0 655 aa17.38■□□□□ 0.37
MSH5-215ENST00000482280 RSPO3Q9BXY4 272 aaPredicted RBP17.38■□□□□ 0.37
MSH5-215ENST00000482280 GPR35Q9HC97 309 aa17.38■□□□□ 0.37
MSH5-215ENST00000482280 SAR1AQ9NR31 198 aa17.38■□□□□ 0.37
MSH5-215ENST00000482280 SLC7A7Q9UM01 511 aa17.38■□□□□ 0.37
MSH5-215ENST00000482280 SH3GLB1Q9Y371 365 aa17.38■□□□□ 0.37
MSH5-215ENST00000482280 RNF223E7ERA6 249 aa17.37■□□□□ 0.37
MSH5-215ENST00000482280 TPST2O60704 377 aa17.37■□□□□ 0.37
MSH5-215ENST00000482280 BGLAPP02818 100 aa17.37■□□□□ 0.37
MSH5-215ENST00000482280 DSCR9P59020 149 aa17.37■□□□□ 0.37
MSH5-215ENST00000482280 KRTAP21-3Q3LHN1 58 aa17.37■□□□□ 0.37
MSH5-215ENST00000482280 PXKQ7Z7A4 578 aa17.37■□□□□ 0.37
MSH5-215ENST00000482280 GPR32P1Q8NGA4 272 aa17.37■□□□□ 0.37
MSH5-215ENST00000482280 TAMM41Q96BW9 452 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms