RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 ZNF782Q6ZMW2 699 aaPredicted RBP2.82□□□□□ -1.96
SMC6-208ENST00000481708 NET1Q7Z628 596 aaPredicted RBP2.82□□□□□ -1.96
SMC6-208ENST00000481708 PALB2Q86YC2 1186 aa2.82□□□□□ -1.96
SMC6-208ENST00000481708 RCOR2Q8IZ40 523 aa2.82□□□□□ -1.96
SMC6-208ENST00000481708 PRSS35Q8N3Z0 413 aa2.82□□□□□ -1.96
SMC6-208ENST00000481708 ARFGAP1Q8N6T3 406 aa2.82□□□□□ -1.96
SMC6-208ENST00000481708 OR2AP1Q8NGE2 309 aa2.82□□□□□ -1.96
SMC6-208ENST00000481708 SDR42E1Q8WUS8 393 aa2.82□□□□□ -1.96
SMC6-208ENST00000481708 CCDC107Q8WV48 283 aa2.82□□□□□ -1.96
SMC6-208ENST00000481708 SCMH1Q96GD3 660 aa2.82□□□□□ -1.96
SMC6-208ENST00000481708 TMEM45AQ9NWC5 275 aa2.82□□□□□ -1.96
SMC6-208ENST00000481708 HIDE1A8MVS5 230 aa2.82□□□□□ -1.96
SMC6-208ENST00000481708 MKRN2OSH3BPM6 223 aa2.82□□□□□ -1.96
SMC6-208ENST00000481708 RFXANKO14593 260 aa2.82□□□□□ -1.96
SMC6-208ENST00000481708 ADAM10O14672 748 aa2.82□□□□□ -1.96
SMC6-208ENST00000481708 CDC123O75794 336 aaPredicted RBP2.82□□□□□ -1.96
SMC6-208ENST00000481708 ATP5HO75947 161 aa2.82□□□□□ -1.96
SMC6-208ENST00000481708 FGF3P11487 239 aaPredicted RBP2.82□□□□□ -1.96
SMC6-208ENST00000481708 AQP2P41181 271 aa2.82□□□□□ -1.96
SMC6-208ENST00000481708 MLF1P58340 268 aa2.82□□□□□ -1.96
SMC6-208ENST00000481708 ST3GAL1Q11201 340 aa2.82□□□□□ -1.96
SMC6-208ENST00000481708 MLF2Q15773 248 aaPredicted RBP2.82□□□□□ -1.96
SMC6-208ENST00000481708 SLC35D2Q76EJ3 337 aa2.82□□□□□ -1.96
SMC6-208ENST00000481708 C12orf56Q8IXR9 622 aa2.82□□□□□ -1.96
SMC6-208ENST00000481708 KBTBD8Q8NFY9 601 aa2.82□□□□□ -1.96
SMC6-208ENST00000481708 NAT6Q93015 286 aa2.82□□□□□ -1.96
SMC6-208ENST00000481708 PINX1Q96BK5 328 aaKnown RBP2.82□□□□□ -1.96
SMC6-208ENST00000481708 SLC6A7Q99884 636 aa2.82□□□□□ -1.96
SMC6-208ENST00000481708 DCTN5Q9BTE1 182 aa2.82□□□□□ -1.96
SMC6-208ENST00000481708 TM6SF2Q9BZW4 377 aa2.82□□□□□ -1.96
SMC6-208ENST00000481708 NMRAL1Q9HBL8 299 aa2.82□□□□□ -1.96
SMC6-208ENST00000481708 RETNQ9HD89 108 aa2.82□□□□□ -1.96
SMC6-208ENST00000481708 ZNF446Q9NWS9 450 aa2.82□□□□□ -1.96
SMC6-208ENST00000481708 AK6Q9Y3D8 172 aaKnown RBP2.82□□□□□ -1.96
SMC6-208ENST00000481708 TIMM22Q9Y584 194 aa2.82□□□□□ -1.96
SMC6-208ENST00000481708 EXPH5Q8NEV8 1989 aa2.82□□□□□ -1.96
SMC6-208ENST00000481708 KBTBD11-OT1A0A1B0GTJ5 212 aa2.82□□□□□ -1.96
SMC6-208ENST00000481708 CYSRT1A8MQ03 144 aa2.82□□□□□ -1.96
SMC6-208ENST00000481708 PRAMEF26H0Y7S4 382 aa2.82□□□□□ -1.96
SMC6-208ENST00000481708 VAPBO95292 243 aa2.82□□□□□ -1.96
SMC6-208ENST00000481708 CLDN14O95500 239 aa2.82□□□□□ -1.96
SMC6-208ENST00000481708 IGHG4P01861 327 aa2.82□□□□□ -1.96
SMC6-208ENST00000481708 FCER2P06734 321 aa2.82□□□□□ -1.96
SMC6-208ENST00000481708 H1F0P07305 194 aaKnown RBP2.82□□□□□ -1.96
SMC6-208ENST00000481708 FAM106CPP0CH98 169 aa2.82□□□□□ -1.96
SMC6-208ENST00000481708 CTRB1P17538 263 aa2.82□□□□□ -1.96
SMC6-208ENST00000481708 P2RY2P41231 377 aa2.82□□□□□ -1.96
SMC6-208ENST00000481708 ATP12AP54707 1039 aa2.82□□□□□ -1.96
SMC6-208ENST00000481708 ZNF234Q14588 700 aa2.82□□□□□ -1.96
SMC6-208ENST00000481708 GANABQ14697 944 aaKnown RBP2.82□□□□□ -1.96
SMC6-208ENST00000481708 PHKG1Q16816 387 aa2.82□□□□□ -1.96
SMC6-208ENST00000481708 UPP1Q16831 310 aa2.82□□□□□ -1.96
SMC6-208ENST00000481708 OR2G6Q5TZ20 316 aa2.82□□□□□ -1.96
SMC6-208ENST00000481708 CTRB2Q6GPI1 263 aa2.82□□□□□ -1.96
SMC6-208ENST00000481708 LINC00336Q6ZUF6 198 aa2.82□□□□□ -1.96
SMC6-208ENST00000481708 ARCQ7LC44 396 aa2.82□□□□□ -1.96
SMC6-208ENST00000481708 ANKRD37Q7Z713 158 aa2.82□□□□□ -1.96
SMC6-208ENST00000481708 LINC00518Q8N0U6 118 aa2.82□□□□□ -1.96
SMC6-208ENST00000481708 B3GNT7Q8NFL0 401 aa2.82□□□□□ -1.96
SMC6-208ENST00000481708 OR2L8Q8NGY9 312 aa2.82□□□□□ -1.96
SMC6-208ENST00000481708 PLPPR1Q8TBJ4 325 aa2.82□□□□□ -1.96
SMC6-208ENST00000481708 C3orf30Q96M34 536 aa2.82□□□□□ -1.96
SMC6-208ENST00000481708 APOOQ9BUR5 198 aa2.82□□□□□ -1.96
SMC6-208ENST00000481708 LRRC19Q9H756 370 aa2.82□□□□□ -1.96
SMC6-208ENST00000481708 RNF121Q9H920 327 aa2.82□□□□□ -1.96
SMC6-208ENST00000481708 ADGRL4Q9HBW9 690 aa2.82□□□□□ -1.96
SMC6-208ENST00000481708 SENP1Q9P0U3 644 aa2.82□□□□□ -1.96
SMC6-208ENST00000481708 CLN8Q9UBY8 286 aa2.82□□□□□ -1.96
SMC6-208ENST00000481708 ZSCAN21Q9Y5A6 473 aaPredicted RBP2.82□□□□□ -1.96
SMC6-208ENST00000481708 CELSR3Q9NYQ7 3312 aa2.81□□□□□ -1.96
SMC6-208ENST00000481708 LY6G6EA0A0G2JKS1 128 aa2.81□□□□□ -1.96
SMC6-208ENST00000481708 VSTM2BA6NLU5 285 aa2.81□□□□□ -1.96
SMC6-208ENST00000481708 ZNF724A8MTY0 619 aa2.81□□□□□ -1.96
SMC6-208ENST00000481708 SIGLEC5O15389 551 aa2.81□□□□□ -1.96
SMC6-208ENST00000481708 ACADSP16219 412 aa2.81□□□□□ -1.96
SMC6-208ENST00000481708 SYT1P21579 422 aa2.81□□□□□ -1.96
SMC6-208ENST00000481708 CD40LGP29965 261 aa2.81□□□□□ -1.96
SMC6-208ENST00000481708 ETV5P41161 510 aa2.81□□□□□ -1.96
SMC6-208ENST00000481708 CRYBB2P43320 205 aa2.81□□□□□ -1.96
SMC6-208ENST00000481708 PDX1P52945 283 aa2.81□□□□□ -1.96
SMC6-208ENST00000481708 PSG3Q16557 428 aa2.81□□□□□ -1.96
SMC6-208ENST00000481708 XKR6Q5GH73 641 aa2.81□□□□□ -1.96
SMC6-208ENST00000481708 SPANXN4Q5MJ08 99 aa2.81□□□□□ -1.96
SMC6-208ENST00000481708 CLVS2Q5SYC1 327 aa2.81□□□□□ -1.96
SMC6-208ENST00000481708 BHLHB9Q6PI77 547 aa2.81□□□□□ -1.96
SMC6-208ENST00000481708 Q6ZPA2 131 aa2.81□□□□□ -1.96
SMC6-208ENST00000481708 ERI1Q8IV48 349 aaKnown RBP2.81□□□□□ -1.96
SMC6-208ENST00000481708 ZNF383Q8NA42 475 aa2.81□□□□□ -1.96
SMC6-208ENST00000481708 GATSQ8NAP1 163 aa2.81□□□□□ -1.96
SMC6-208ENST00000481708 OR4D9Q8NGE8 314 aa2.81□□□□□ -1.96
SMC6-208ENST00000481708 OR5T3Q8NGG3 340 aa2.81□□□□□ -1.96
SMC6-208ENST00000481708 GATAD1Q8WUU5 269 aa2.81□□□□□ -1.96
SMC6-208ENST00000481708 NEIL2Q969S2 332 aa2.81□□□□□ -1.96
SMC6-208ENST00000481708 COL21A1Q96P44 957 aa2.81□□□□□ -1.96
SMC6-208ENST00000481708 SHCBP1LQ9BZQ2 653 aa2.81□□□□□ -1.96
SMC6-208ENST00000481708 MEPEQ9NQ76 525 aaPredicted RBP2.81□□□□□ -1.96
SMC6-208ENST00000481708 NECAP2Q9NVZ3 263 aa2.81□□□□□ -1.96
SMC6-208ENST00000481708 RBAKQ9NYW8 714 aaPredicted RBP2.81□□□□□ -1.96
SMC6-208ENST00000481708 FBXL4Q9UKA2 621 aa2.81□□□□□ -1.96
SMC6-208ENST00000481708 DDX19BQ9UMR2 479 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms