RNA–Protein interactions for RNA: ENST00000479542.1

ABCF1-206, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 2

Gene ABCF1, Length 893 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-206ENST00000479542 ZNF443Q9Y2A4 671 aaPredicted RBP11.5□□□□□ -0.57
ABCF1-206ENST00000479542 CHST2Q9Y4C5 530 aa11.5□□□□□ -0.57
ABCF1-206ENST00000479542 ZNF99A8MXY4 864 aaPredicted RBP11.49□□□□□ -0.57
ABCF1-206ENST00000479542 NR5A2O00482 541 aa11.49□□□□□ -0.57
ABCF1-206ENST00000479542 AKAP8O43823 692 aaKnown RBP11.49□□□□□ -0.57
ABCF1-206ENST00000479542 SLC43A1O75387 559 aa11.49□□□□□ -0.57
ABCF1-206ENST00000479542 PNMTP11086 282 aa11.49□□□□□ -0.57
ABCF1-206ENST00000479542 BMP2P12643 396 aa11.49□□□□□ -0.57
ABCF1-206ENST00000479542 NR4A1P22736 598 aa11.49□□□□□ -0.57
ABCF1-206ENST00000479542 CDKN2CP42773 168 aa11.49□□□□□ -0.57
ABCF1-206ENST00000479542 COMPP49747 757 aaPredicted RBP11.49□□□□□ -0.57
ABCF1-206ENST00000479542 TMEM33P57088 247 aa11.49□□□□□ -0.57
ABCF1-206ENST00000479542 ARF1P84077 181 aaKnown RBP11.49□□□□□ -0.57
ABCF1-206ENST00000479542 BNIP2Q12982 314 aa11.49□□□□□ -0.57
ABCF1-206ENST00000479542 CARTPTQ16568 116 aa11.49□□□□□ -0.57
ABCF1-206ENST00000479542 PDCD4Q53EL6 469 aaKnown RBP11.49□□□□□ -0.57
ABCF1-206ENST00000479542 FAM69AQ5T7M9 428 aa11.49□□□□□ -0.57
ABCF1-206ENST00000479542 IL17RELQ6ZVW7 336 aa11.49□□□□□ -0.57
ABCF1-206ENST00000479542 VRK2Q86Y07 508 aa11.49□□□□□ -0.57
ABCF1-206ENST00000479542 CLIP4Q8N3C7 705 aa11.49□□□□□ -0.57
ABCF1-206ENST00000479542 PIK3C3Q8NEB9 887 aa11.49□□□□□ -0.57
ABCF1-206ENST00000479542 CKAP2Q8WWK9 683 aa11.49□□□□□ -0.57
ABCF1-206ENST00000479542 RACGAP1Q9H0H5 632 aa11.49□□□□□ -0.57
ABCF1-206ENST00000479542 GPR35Q9HC97 309 aa11.49□□□□□ -0.57
ABCF1-206ENST00000479542 METRNQ9UJH8 293 aa11.49□□□□□ -0.57
ABCF1-206ENST00000479542 CMAHPQ9Y471 501 aa11.49□□□□□ -0.57
ABCF1-206ENST00000479542 LRP5LA4QPB2 252 aa11.48□□□□□ -0.57
ABCF1-206ENST00000479542 TMEM247A6NEH6 219 aa11.48□□□□□ -0.57
ABCF1-206ENST00000479542 AIM2O14862 343 aa11.48□□□□□ -0.57
ABCF1-206ENST00000479542 SYNGR3O43761 229 aa11.48□□□□□ -0.57
ABCF1-206ENST00000479542 APEX1P27695 318 aaKnown RBP11.48□□□□□ -0.57
ABCF1-206ENST00000479542 GLRXP35754 106 aa11.48□□□□□ -0.57
ABCF1-206ENST00000479542 CLDN17P56750 224 aa11.48□□□□□ -0.57
ABCF1-206ENST00000479542 LGALS3BPQ08380 585 aa11.48□□□□□ -0.57
ABCF1-206ENST00000479542 DAG1Q14118 895 aa11.48□□□□□ -0.57
ABCF1-206ENST00000479542 ADRM1Q16186 407 aa11.48□□□□□ -0.57
ABCF1-206ENST00000479542 MMEL1Q495T6 779 aa11.48□□□□□ -0.57
ABCF1-206ENST00000479542 TTMPQ5BVD1 217 aa11.48□□□□□ -0.57
ABCF1-206ENST00000479542 USP43Q70EL4 1123 aa11.48□□□□□ -0.57
ABCF1-206ENST00000479542 MAVSQ7Z434 540 aa11.48□□□□□ -0.57
ABCF1-206ENST00000479542 SPATA21Q7Z572 469 aa11.48□□□□□ -0.57
ABCF1-206ENST00000479542 TMEM123Q8N131 208 aa11.48□□□□□ -0.57
ABCF1-206ENST00000479542 CADM2Q8N3J6 435 aa11.48□□□□□ -0.57
ABCF1-206ENST00000479542 TEX29Q8N6K0 151 aa11.48□□□□□ -0.57
ABCF1-206ENST00000479542 MAELQ96JY0 434 aaKnown RBP11.48□□□□□ -0.57
ABCF1-206ENST00000479542 ATP6V1G3Q96LB4 118 aa11.48□□□□□ -0.57
ABCF1-206ENST00000479542 ZNF75AQ96N20 296 aa11.48□□□□□ -0.57
ABCF1-206ENST00000479542 ZBTB18Q99592 522 aa11.48□□□□□ -0.57
ABCF1-206ENST00000479542 TPT1P8Q9HAU6 139 aa11.48□□□□□ -0.57
ABCF1-206ENST00000479542 CACYBPQ9HB71 228 aaKnown RBP11.48□□□□□ -0.57
ABCF1-206ENST00000479542 FBXL3Q9UKT7 428 aa11.48□□□□□ -0.57
ABCF1-206ENST00000479542 SPEF1Q9Y4P9 236 aa11.48□□□□□ -0.57
ABCF1-206ENST00000479542 A0A096LPE4 126 aa11.47□□□□□ -0.57
ABCF1-206ENST00000479542 A0A1W2PPZ6 126 aa11.47□□□□□ -0.57
ABCF1-206ENST00000479542 TFP02787 698 aa11.47□□□□□ -0.57
ABCF1-206ENST00000479542 ZNF35P13682 527 aa11.47□□□□□ -0.57
ABCF1-206ENST00000479542 IDO1P14902 403 aa11.47□□□□□ -0.57
ABCF1-206ENST00000479542 ETS2P15036 469 aa11.47□□□□□ -0.57
ABCF1-206ENST00000479542 IFNGR1P15260 489 aa11.47□□□□□ -0.57
ABCF1-206ENST00000479542 NCF2P19878 526 aaPredicted RBP11.47□□□□□ -0.57
ABCF1-206ENST00000479542 SRP14P37108 136 aaKnown RBP11.47□□□□□ -0.57
ABCF1-206ENST00000479542 DSTNP60981 165 aa11.47□□□□□ -0.57
ABCF1-206ENST00000479542 FADDQ13158 208 aa11.47□□□□□ -0.57
ABCF1-206ENST00000479542 CEACAM16Q2WEN9 425 aa11.47□□□□□ -0.57
ABCF1-206ENST00000479542 NXNQ6DKJ4 435 aa11.47□□□□□ -0.57
ABCF1-206ENST00000479542 VHLLQ6RSH7 139 aa11.47□□□□□ -0.57
ABCF1-206ENST00000479542 NHLRC1Q6VVB1 395 aa11.47□□□□□ -0.57
ABCF1-206ENST00000479542 H1FNTQ75WM6 255 aaPredicted RBP11.47□□□□□ -0.57
ABCF1-206ENST00000479542 SNX32Q86XE0 403 aa11.47□□□□□ -0.57
ABCF1-206ENST00000479542 GPR137CQ8N3F9 429 aa11.47□□□□□ -0.57
ABCF1-206ENST00000479542 SVOPLQ8N434 492 aa11.47□□□□□ -0.57
ABCF1-206ENST00000479542 DNAJA4Q8WW22 397 aaPredicted RBP11.47□□□□□ -0.57
ABCF1-206ENST00000479542 SLC38A4Q969I6 547 aa11.47□□□□□ -0.57
ABCF1-206ENST00000479542 MRPL24Q96A35 216 aaKnown RBP11.47□□□□□ -0.57
ABCF1-206ENST00000479542 SLC41A3Q96GZ6 507 aa11.47□□□□□ -0.57
ABCF1-206ENST00000479542 OR2M2Q96R28 347 aa11.47□□□□□ -0.57
ABCF1-206ENST00000479542 OR52B2Q96RD2 323 aa11.47□□□□□ -0.57
ABCF1-206ENST00000479542 RMND5AQ9H871 391 aa11.47□□□□□ -0.57
ABCF1-206ENST00000479542 EVA1AQ9H8M9 152 aa11.47□□□□□ -0.57
ABCF1-206ENST00000479542 SEC61A2Q9H9S3 476 aa11.47□□□□□ -0.57
ABCF1-206ENST00000479542 NOX3Q9HBY0 568 aa11.47□□□□□ -0.57
ABCF1-206ENST00000479542 CRLF2Q9HC73 371 aa11.47□□□□□ -0.57
ABCF1-206ENST00000479542 CORINQ9Y5Q5 1042 aa11.47□□□□□ -0.57
ABCF1-206ENST00000479542 GMEB1Q9Y692 573 aa11.47□□□□□ -0.57
ABCF1-206ENST00000479542 SLC22A3O75751 556 aa11.46□□□□□ -0.57
ABCF1-206ENST00000479542 BCHEP06276 602 aa11.46□□□□□ -0.57
ABCF1-206ENST00000479542 GSNP06396 782 aa11.46□□□□□ -0.57
ABCF1-206ENST00000479542 CELA3BP08861 270 aa11.46□□□□□ -0.57
ABCF1-206ENST00000479542 PRG2P13727 222 aa11.46□□□□□ -0.57
ABCF1-206ENST00000479542 ETFAP13804 333 aa11.46□□□□□ -0.57
ABCF1-206ENST00000479542 H2AFXP16104 143 aaPredicted RBP11.46□□□□□ -0.57
ABCF1-206ENST00000479542 ZNF14P17017 642 aaPredicted RBP11.46□□□□□ -0.57
ABCF1-206ENST00000479542 ITGA2P17301 1181 aa11.46□□□□□ -0.57
ABCF1-206ENST00000479542 ACHEP22303 614 aa11.46□□□□□ -0.57
ABCF1-206ENST00000479542 GTF2E2P29084 291 aaKnown RBP11.46□□□□□ -0.57
ABCF1-206ENST00000479542 PRKAR1BP31321 381 aa11.46□□□□□ -0.57
ABCF1-206ENST00000479542 IL2RGP31785 369 aa11.46□□□□□ -0.57
ABCF1-206ENST00000479542 CRATP43155 626 aa11.46□□□□□ -0.57
ABCF1-206ENST00000479542 RPS23P62266 143 aaKnown RBP11.46□□□□□ -0.57
ABCF1-206ENST00000479542 RUNX1T1Q06455 604 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms