RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 HYAL4Q2M3T9 481 aa5.59□□□□□ -1.51
SF3B1-209ENST00000479532 KLHL26Q53HC5 615 aa5.59□□□□□ -1.51
SF3B1-209ENST00000479532 KRTCAP3Q53RY4 240 aa5.59□□□□□ -1.51
SF3B1-209ENST00000479532 ESCO2Q56NI9 601 aa5.59□□□□□ -1.51
SF3B1-209ENST00000479532 SHEQ5VZ18 495 aa5.59□□□□□ -1.51
SF3B1-209ENST00000479532 LPCAT4Q643R3 524 aa5.59□□□□□ -1.51
SF3B1-209ENST00000479532 ZNF544Q6NX49 715 aa5.59□□□□□ -1.51
SF3B1-209ENST00000479532 C8orf82Q6P1X6 216 aaPredicted RBP5.59□□□□□ -1.51
SF3B1-209ENST00000479532 PCSK4Q6UW60 755 aa5.59□□□□□ -1.51
SF3B1-209ENST00000479532 PRSS48Q7RTY5 328 aa5.59□□□□□ -1.51
SF3B1-209ENST00000479532 ZNF550Q7Z398 422 aa5.59□□□□□ -1.51
SF3B1-209ENST00000479532 CALHM3Q86XJ0 350 aa5.59□□□□□ -1.51
SF3B1-209ENST00000479532 PTOV1Q86YD1 416 aa5.59□□□□□ -1.51
SF3B1-209ENST00000479532 SLC38A6Q8IZM9 456 aa5.59□□□□□ -1.51
SF3B1-209ENST00000479532 GHDCQ8N2G8 530 aa5.59□□□□□ -1.51
SF3B1-209ENST00000479532 OR13F1Q8NGS4 319 aa5.59□□□□□ -1.51
SF3B1-209ENST00000479532 OR14L1PQ8NHC6 308 aa5.59□□□□□ -1.51
SF3B1-209ENST00000479532 ZNF563Q8TA94 476 aa5.59□□□□□ -1.51
SF3B1-209ENST00000479532 CPT1CQ8TCG5 803 aa5.59□□□□□ -1.51
SF3B1-209ENST00000479532 DUSP19Q8WTR2 217 aa5.59□□□□□ -1.51
SF3B1-209ENST00000479532 PHF10Q8WUB8 498 aaKnown RBP5.59□□□□□ -1.51
SF3B1-209ENST00000479532 RNF138Q8WVD3 245 aa5.59□□□□□ -1.51
SF3B1-209ENST00000479532 TMEM234Q8WY98 164 aa5.59□□□□□ -1.51
SF3B1-209ENST00000479532 FIG4Q92562 907 aa5.59□□□□□ -1.51
SF3B1-209ENST00000479532 FAM162AQ96A26 154 aa5.59□□□□□ -1.51
SF3B1-209ENST00000479532 SH3YL1Q96HL8 342 aaPredicted RBP5.59□□□□□ -1.51
SF3B1-209ENST00000479532 RNF145Q96MT1 663 aa5.59□□□□□ -1.51
SF3B1-209ENST00000479532 ZNF583Q96ND8 569 aa5.59□□□□□ -1.51
SF3B1-209ENST00000479532 DACH2Q96NX9 599 aa5.59□□□□□ -1.51
SF3B1-209ENST00000479532 PINK1Q9BXM7 581 aa5.59□□□□□ -1.51
SF3B1-209ENST00000479532 LAT2Q9GZY6 243 aa5.59□□□□□ -1.51
SF3B1-209ENST00000479532 TP63Q9H3D4 680 aaPredicted RBP5.59□□□□□ -1.51
SF3B1-209ENST00000479532 MUC13Q9H3R2 512 aa5.59□□□□□ -1.51
SF3B1-209ENST00000479532 DSN1Q9H410 356 aa5.59□□□□□ -1.51
SF3B1-209ENST00000479532 SIAEQ9HAT2 523 aa5.59□□□□□ -1.51
SF3B1-209ENST00000479532 EXOSC3Q9NQT5 275 aaKnown RBP5.59□□□□□ -1.51
SF3B1-209ENST00000479532 DEPPQ9NTK1 212 aa5.59□□□□□ -1.51
SF3B1-209ENST00000479532 FBXO34Q9NWN3 711 aa5.59□□□□□ -1.51
SF3B1-209ENST00000479532 PAK1IP1Q9NWT1 392 aaPredicted RBP5.59□□□□□ -1.51
SF3B1-209ENST00000479532 ADPRHL2Q9NX46 363 aa5.59□□□□□ -1.51
SF3B1-209ENST00000479532 CMTM6Q9NX76 183 aa5.59□□□□□ -1.51
SF3B1-209ENST00000479532 FLRT3Q9NZU0 649 aa5.59□□□□□ -1.51
SF3B1-209ENST00000479532 ABCD2Q9UBJ2 740 aa5.59□□□□□ -1.51
SF3B1-209ENST00000479532 RPS6KA6Q9UK32 745 aa5.59□□□□□ -1.51
SF3B1-209ENST00000479532 BAG5Q9UL15 447 aa5.59□□□□□ -1.51
SF3B1-209ENST00000479532 ZNF443Q9Y2A4 671 aaPredicted RBP5.59□□□□□ -1.51
SF3B1-209ENST00000479532 ZNF175Q9Y473 711 aa5.59□□□□□ -1.51
SF3B1-209ENST00000479532 AUP1Q9Y679 476 aa5.59□□□□□ -1.51
SF3B1-209ENST00000479532 IGLV3-32A0A0A0MS00 114 aa5.58□□□□□ -1.52
SF3B1-209ENST00000479532 TRGV5A0A0B4J1U4 118 aa5.58□□□□□ -1.52
SF3B1-209ENST00000479532 A0A0G2JMM0 328 aa5.58□□□□□ -1.52
SF3B1-209ENST00000479532 LINC00854A0A1B0GVQ3 168 aa5.58□□□□□ -1.52
SF3B1-209ENST00000479532 A0A1W2PPB8 328 aa5.58□□□□□ -1.52
SF3B1-209ENST00000479532 A0A1W2PRS3 328 aa5.58□□□□□ -1.52
SF3B1-209ENST00000479532 EFCAB10A6NFE3 127 aa5.58□□□□□ -1.52
SF3B1-209ENST00000479532 ANKUB1A6NFN9 424 aa5.58□□□□□ -1.52
SF3B1-209ENST00000479532 KIR3DP1A8MWS1 328 aa5.58□□□□□ -1.52
SF3B1-209ENST00000479532 NPIPA5E9PKD4 350 aa5.58□□□□□ -1.52
SF3B1-209ENST00000479532 NPIPB9F8W1W9 429 aa5.58□□□□□ -1.52
SF3B1-209ENST00000479532 CXCR6O00574 342 aa5.58□□□□□ -1.52
SF3B1-209ENST00000479532 NME4O00746 187 aa5.58□□□□□ -1.52
SF3B1-209ENST00000479532 GMFGO60234 142 aa5.58□□□□□ -1.52
SF3B1-209ENST00000479532 HCN1O60741 890 aa5.58□□□□□ -1.52
SF3B1-209ENST00000479532 MRPS14O60783 128 aaKnown RBP5.58□□□□□ -1.52
SF3B1-209ENST00000479532 GLSO94925 669 aaPredicted RBP5.58□□□□□ -1.52
SF3B1-209ENST00000479532 HSD17B1P14061 328 aa5.58□□□□□ -1.52
SF3B1-209ENST00000479532 PRKACAP17612 351 aa5.58□□□□□ -1.52
SF3B1-209ENST00000479532 HK1P19367 917 aa5.58□□□□□ -1.52
SF3B1-209ENST00000479532 TCN1P20061 433 aaPredicted RBP5.58□□□□□ -1.52
SF3B1-209ENST00000479532 RPS4Y1P22090 263 aaKnown RBP5.58□□□□□ -1.52
SF3B1-209ENST00000479532 DPP4P27487 766 aa5.58□□□□□ -1.52
SF3B1-209ENST00000479532 HTR1EP28566 365 aa5.58□□□□□ -1.52
SF3B1-209ENST00000479532 AQP1P29972 269 aa5.58□□□□□ -1.52
SF3B1-209ENST00000479532 RFC3P40938 356 aa5.58□□□□□ -1.52
SF3B1-209ENST00000479532 PTGDSP41222 190 aa5.58□□□□□ -1.52
SF3B1-209ENST00000479532 EIF1P41567 113 aaKnown RBP5.58□□□□□ -1.52
SF3B1-209ENST00000479532 MAGEA5P43359 124 aa5.58□□□□□ -1.52
SF3B1-209ENST00000479532 GSK3BP49841 420 aa5.58□□□□□ -1.52
SF3B1-209ENST00000479532 GZMMP51124 257 aa5.58□□□□□ -1.52
SF3B1-209ENST00000479532 GAS1P54826 345 aa5.58□□□□□ -1.52
SF3B1-209ENST00000479532 CASP6P55212 293 aa5.58□□□□□ -1.52
SF3B1-209ENST00000479532 GABARAPL2P60520 117 aa5.58□□□□□ -1.52
SF3B1-209ENST00000479532 SSTP61278 116 aa5.58□□□□□ -1.52
SF3B1-209ENST00000479532 PMP22Q01453 160 aa5.58□□□□□ -1.52
SF3B1-209ENST00000479532 FOXO1Q12778 655 aa5.58□□□□□ -1.52
SF3B1-209ENST00000479532 ITGADQ13349 1161 aa5.58□□□□□ -1.52
SF3B1-209ENST00000479532 CD226Q15762 336 aa5.58□□□□□ -1.52
SF3B1-209ENST00000479532 MST1LQ2TV78 715 aa5.58□□□□□ -1.52
SF3B1-209ENST00000479532 GLYR1Q49A26 553 aaPredicted RBP5.58□□□□□ -1.52
SF3B1-209ENST00000479532 MRPL2Q5T653 305 aaKnown RBP5.58□□□□□ -1.52
SF3B1-209ENST00000479532 OR5M10Q6IEU7 315 aa5.58□□□□□ -1.52
SF3B1-209ENST00000479532 ENPP6Q6UWR7 440 aa5.58□□□□□ -1.52
SF3B1-209ENST00000479532 ZNF836Q6ZNA1 936 aa5.58□□□□□ -1.52
SF3B1-209ENST00000479532 AMIGO2Q86SJ2 522 aa5.58□□□□□ -1.52
SF3B1-209ENST00000479532 RANBP3LQ86VV4 465 aaPredicted RBP5.58□□□□□ -1.52
SF3B1-209ENST00000479532 VRK2Q86Y07 508 aa5.58□□□□□ -1.52
SF3B1-209ENST00000479532 EID3Q8N140 333 aa5.58□□□□□ -1.52
SF3B1-209ENST00000479532 TMEM251Q8N6I4 163 aa5.58□□□□□ -1.52
SF3B1-209ENST00000479532 FADS6Q8N9I5 356 aa5.58□□□□□ -1.52
SF3B1-209ENST00000479532 Q8NA96 180 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms