RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 A0A1B0GVY2 172 aa3.77□□□□□ -1.81
CCDC171-207ENST00000478913 SYCE3A1L190 88 aa3.77□□□□□ -1.81
CCDC171-207ENST00000478913 CDC7O00311 574 aa3.77□□□□□ -1.81
CCDC171-207ENST00000478913 ARPC1BO15143 372 aaKnown RBP3.77□□□□□ -1.81
CCDC171-207ENST00000478913 CFLARO15519 480 aa3.77□□□□□ -1.81
CCDC171-207ENST00000478913 NME2P1O60361 137 aa3.77□□□□□ -1.81
CCDC171-207ENST00000478913 NEMFO60524 1076 aa3.77□□□□□ -1.81
CCDC171-207ENST00000478913 BAG2O95816 211 aa3.77□□□□□ -1.81
CCDC171-207ENST00000478913 NUDT14O95848 222 aa3.77□□□□□ -1.81
CCDC171-207ENST00000478913 GOT2P00505 430 aaKnown RBP3.77□□□□□ -1.81
CCDC171-207ENST00000478913 TPM1P09493 284 aa3.77□□□□□ -1.81
CCDC171-207ENST00000478913 ANXA13P27216 316 aa3.77□□□□□ -1.81
CCDC171-207ENST00000478913 HMGCLP35914 325 aa3.77□□□□□ -1.81
CCDC171-207ENST00000478913 PFN3P60673 137 aa3.77□□□□□ -1.81
CCDC171-207ENST00000478913 SRP54P61011 504 aaKnown RBP3.77□□□□□ -1.81
CCDC171-207ENST00000478913 SSTP61278 116 aa3.77□□□□□ -1.81
CCDC171-207ENST00000478913 TPM4P67936 248 aa3.77□□□□□ -1.81
CCDC171-207ENST00000478913 CBX1P83916 185 aa3.77□□□□□ -1.81
CCDC171-207ENST00000478913 NAAAQ02083 359 aa3.77□□□□□ -1.81
CCDC171-207ENST00000478913 PPP2R5CQ13362 524 aa3.77□□□□□ -1.81
CCDC171-207ENST00000478913 Q1RN00 199 aa3.77□□□□□ -1.81
CCDC171-207ENST00000478913 CMPK2Q5EBM0 449 aa3.77□□□□□ -1.81
CCDC171-207ENST00000478913 BAIAP2L2Q6UXY1 529 aa3.77□□□□□ -1.81
CCDC171-207ENST00000478913 BNIPLQ7Z465 357 aa3.77□□□□□ -1.81
CCDC171-207ENST00000478913 PYROXD2Q8N2H3 581 aa3.77□□□□□ -1.81
CCDC171-207ENST00000478913 FAM131CQ96AQ9 280 aa3.77□□□□□ -1.81
CCDC171-207ENST00000478913 ACCSQ96QU6 501 aa3.77□□□□□ -1.81
CCDC171-207ENST00000478913 ATP6V0BQ99437 205 aa3.77□□□□□ -1.81
CCDC171-207ENST00000478913 ADGRL4Q9HBW9 690 aa3.77□□□□□ -1.81
CCDC171-207ENST00000478913 FAM153AQ9UHL3 310 aa3.77□□□□□ -1.81
CCDC171-207ENST00000478913 EMCNQ9ULC0 261 aa3.77□□□□□ -1.81
CCDC171-207ENST00000478913 USP27XA6NNY8 438 aa3.76□□□□□ -1.81
CCDC171-207ENST00000478913 PHOX2AO14813 284 aa3.76□□□□□ -1.81
CCDC171-207ENST00000478913 SRPX2O60687 465 aaPredicted RBP3.76□□□□□ -1.81
CCDC171-207ENST00000478913 RHBDL1O75783 438 aa3.76□□□□□ -1.81
CCDC171-207ENST00000478913 SFNP31947 248 aa3.76□□□□□ -1.81
CCDC171-207ENST00000478913 CARTPTQ16568 116 aa3.76□□□□□ -1.81
CCDC171-207ENST00000478913 ATAD3CQ5T2N8 411 aa3.76□□□□□ -1.81
CCDC171-207ENST00000478913 LINC00242Q5T6M2 205 aa3.76□□□□□ -1.81
CCDC171-207ENST00000478913 FAM219BQ5XKK7 198 aa3.76□□□□□ -1.81
CCDC171-207ENST00000478913 NEK5Q6P3R8 708 aa3.76□□□□□ -1.81
CCDC171-207ENST00000478913 ZNF600Q6ZNG1 722 aa3.76□□□□□ -1.81
CCDC171-207ENST00000478913 ZBTB8OSQ8IWT0 167 aa3.76□□□□□ -1.81
CCDC171-207ENST00000478913 KRT222Q8N1A0 295 aa3.76□□□□□ -1.81
CCDC171-207ENST00000478913 MLKLQ8NB16 471 aa3.76□□□□□ -1.81
CCDC171-207ENST00000478913 TMEM185AQ8NFB2 350 aa3.76□□□□□ -1.81
CCDC171-207ENST00000478913 CCL4L1Q8NHW4 92 aa3.76□□□□□ -1.81
CCDC171-207ENST00000478913 ZNF671Q8TAW3 534 aa3.76□□□□□ -1.81
CCDC171-207ENST00000478913 ZPLD1Q8TCW7 415 aa3.76□□□□□ -1.81
CCDC171-207ENST00000478913 MGARPQ8TDB4 240 aa3.76□□□□□ -1.81
CCDC171-207ENST00000478913 ZNF418Q8TF45 676 aaPredicted RBP3.76□□□□□ -1.81
CCDC171-207ENST00000478913 P3H4Q92791 437 aa3.76□□□□□ -1.81
CCDC171-207ENST00000478913 FBXO32Q969P5 355 aa3.76□□□□□ -1.81
CCDC171-207ENST00000478913 CPXM1Q96SM3 734 aa3.76□□□□□ -1.81
CCDC171-207ENST00000478913 NFKBIZQ9BYH8 718 aa3.76□□□□□ -1.81
CCDC171-207ENST00000478913 ATG10Q9H0Y0 220 aa3.76□□□□□ -1.81
CCDC171-207ENST00000478913 NRN1Q9NPD7 142 aa3.76□□□□□ -1.81
CCDC171-207ENST00000478913 XPNPEP1Q9NQW7 623 aa3.76□□□□□ -1.81
CCDC171-207ENST00000478913 FAM120CQ9NX05 1096 aaKnown RBP3.76□□□□□ -1.81
CCDC171-207ENST00000478913 ABCD2Q9UBJ2 740 aa3.76□□□□□ -1.81
CCDC171-207ENST00000478913 TRIM10Q9UDY6 481 aa3.76□□□□□ -1.81
CCDC171-207ENST00000478913 GLS2Q9UI32 602 aa3.76□□□□□ -1.81
CCDC171-207ENST00000478913 EIF3LQ9Y262 564 aaKnown RBP3.76□□□□□ -1.81
CCDC171-207ENST00000478913 NAALAD2Q9Y3Q0 740 aa3.76□□□□□ -1.81
CCDC171-207ENST00000478913 ZNF175Q9Y473 711 aa3.76□□□□□ -1.81
CCDC171-207ENST00000478913 SCN2AQ99250 2005 aa3.76□□□□□ -1.81
CCDC171-207ENST00000478913 ANAPC1Q9H1A4 1944 aa3.76□□□□□ -1.81
CCDC171-207ENST00000478913 IGLV3-10A0A075B6K4 115 aa3.75□□□□□ -1.81
CCDC171-207ENST00000478913 IGHV3OR16-12A0A075B7B8 117 aa3.75□□□□□ -1.81
CCDC171-207ENST00000478913 GOLGA6L19H0YKK7 550 aa3.75□□□□□ -1.81
CCDC171-207ENST00000478913 HCRTO43612 131 aa3.75□□□□□ -1.81
CCDC171-207ENST00000478913 REM1O75628 298 aa3.75□□□□□ -1.81
CCDC171-207ENST00000478913 ADCY5O95622 1261 aa3.75□□□□□ -1.81
CCDC171-207ENST00000478913 THY1P04216 161 aa3.75□□□□□ -1.81
CCDC171-207ENST00000478913 GSTA1P08263 222 aa3.75□□□□□ -1.81
CCDC171-207ENST00000478913 SNRPCP09234 159 aaKnown RBP3.75□□□□□ -1.81
CCDC171-207ENST00000478913 SLC35E2P0CK97 266 aa3.75□□□□□ -1.81
CCDC171-207ENST00000478913 MX1P20591 662 aa3.75□□□□□ -1.81
CCDC171-207ENST00000478913 CD70P32970 193 aa3.75□□□□□ -1.81
CCDC171-207ENST00000478913 ARL2P36404 184 aa3.75□□□□□ -1.81
CCDC171-207ENST00000478913 NPY2RP49146 381 aa3.75□□□□□ -1.81
CCDC171-207ENST00000478913 ARHGDIAP52565 204 aa3.75□□□□□ -1.81
CCDC171-207ENST00000478913 PSMC5P62195 406 aa3.75□□□□□ -1.81
CCDC171-207ENST00000478913 UBE2HP62256 183 aa3.75□□□□□ -1.81
CCDC171-207ENST00000478913 PIGHQ14442 188 aaPredicted RBP3.75□□□□□ -1.81
CCDC171-207ENST00000478913 TIMM50Q3ZCQ8 353 aa3.75□□□□□ -1.81
CCDC171-207ENST00000478913 PIP5KL1Q5T9C9 394 aa3.75□□□□□ -1.81
CCDC171-207ENST00000478913 KCTD16Q68DU8 428 aa3.75□□□□□ -1.81
CCDC171-207ENST00000478913 MFSD7Q6UXD7 560 aa3.75□□□□□ -1.81
CCDC171-207ENST00000478913 ISLR2Q6UXK2 745 aa3.75□□□□□ -1.81
CCDC171-207ENST00000478913 SLC13A5Q86YT5 568 aaPredicted RBP3.75□□□□□ -1.81
CCDC171-207ENST00000478913 BATF2Q8N1L9 274 aa3.75□□□□□ -1.81
CCDC171-207ENST00000478913 PATE1Q8WXA2 126 aa3.75□□□□□ -1.81
CCDC171-207ENST00000478913 CRYGNQ8WXF5 182 aa3.75□□□□□ -1.81
CCDC171-207ENST00000478913 TMEM37Q8WXS4 190 aa3.75□□□□□ -1.81
CCDC171-207ENST00000478913 KLF6Q99612 283 aaPredicted RBP3.75□□□□□ -1.81
CCDC171-207ENST00000478913 KRTAP4-3Q9BYR4 195 aa3.75□□□□□ -1.81
CCDC171-207ENST00000478913 NLNQ9BYT8 704 aa3.75□□□□□ -1.81
CCDC171-207ENST00000478913 THAP9Q9H5L6 903 aa3.75□□□□□ -1.81
CCDC171-207ENST00000478913 METTL17Q9H7H0 456 aaPredicted RBP3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms