RNA–Protein interactions for RNA: ENST00000478896.2

VCL-205, Transcript of vinculin, humanhuman

TSL 5

Gene VCL, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-205ENST00000478896 RNF217Q8TC41 542 aa11.48□□□□□ -0.57
VCL-205ENST00000478896 CKAP2Q8WWK9 683 aa11.48□□□□□ -0.57
VCL-205ENST00000478896 SLC38A4Q969I6 547 aa11.48□□□□□ -0.57
VCL-205ENST00000478896 VPS33AQ96AX1 596 aa11.48□□□□□ -0.57
VCL-205ENST00000478896 KTI12Q96EK9 354 aaPredicted RBP11.48□□□□□ -0.57
VCL-205ENST00000478896 OXGR1Q96P68 337 aa11.48□□□□□ -0.57
VCL-205ENST00000478896 SOX7Q9BT81 388 aa11.48□□□□□ -0.57
VCL-205ENST00000478896 RAD21L1Q9H4I0 556 aa11.48□□□□□ -0.57
VCL-205ENST00000478896 CRLF2Q9HC73 371 aa11.48□□□□□ -0.57
VCL-205ENST00000478896 GPR35Q9HC97 309 aa11.48□□□□□ -0.57
VCL-205ENST00000478896 ZIM2Q9NZV7 527 aa11.48□□□□□ -0.57
VCL-205ENST00000478896 USP22Q9UPT9 525 aa11.48□□□□□ -0.57
VCL-205ENST00000478896 CHST2Q9Y4C5 530 aa11.48□□□□□ -0.57
VCL-205ENST00000478896 IGHV2OR16-5A0A0B4J2B6 119 aa11.47□□□□□ -0.57
VCL-205ENST00000478896 ZNF99A8MXY4 864 aaPredicted RBP11.47□□□□□ -0.57
VCL-205ENST00000478896 RPL36A-HNRNPH2H7BZ11 118 aa11.47□□□□□ -0.57
VCL-205ENST00000478896 M0R082 166 aa11.47□□□□□ -0.57
VCL-205ENST00000478896 M0R3G1 203 aa11.47□□□□□ -0.57
VCL-205ENST00000478896 OR2T1O43869 369 aa11.47□□□□□ -0.57
VCL-205ENST00000478896 NQO1P15559 274 aaKnown RBP11.47□□□□□ -0.57
VCL-205ENST00000478896 CBLP22681 906 aa11.47□□□□□ -0.57
VCL-205ENST00000478896 SRP14P37108 136 aaKnown RBP11.47□□□□□ -0.57
VCL-205ENST00000478896 POLR2JP52435 117 aaKnown RBP11.47□□□□□ -0.57
VCL-205ENST00000478896 HGFACQ04756 655 aa11.47□□□□□ -0.57
VCL-205ENST00000478896 DAG1Q14118 895 aa11.47□□□□□ -0.57
VCL-205ENST00000478896 CARD17Q5XLA6 110 aa11.47□□□□□ -0.57
VCL-205ENST00000478896 C5orf46Q6UWT4 87 aa11.47□□□□□ -0.57
VCL-205ENST00000478896 MDP1Q86V88 176 aa11.47□□□□□ -0.57
VCL-205ENST00000478896 ZCCHC24Q8N2G6 241 aaKnown RBP11.47□□□□□ -0.57
VCL-205ENST00000478896 ANKK1Q8NFD2 765 aa11.47□□□□□ -0.57
VCL-205ENST00000478896 OR9I1Q8NGQ6 314 aa11.47□□□□□ -0.57
VCL-205ENST00000478896 ZNF417Q8TAU3 575 aa11.47□□□□□ -0.57
VCL-205ENST00000478896 MAL2Q969L2 176 aa11.47□□□□□ -0.57
VCL-205ENST00000478896 SNX18Q96RF0 628 aa11.47□□□□□ -0.57
VCL-205ENST00000478896 ZNF587Q96SQ5 575 aaPredicted RBP11.47□□□□□ -0.57
VCL-205ENST00000478896 TPK1Q9H3S4 243 aa11.47□□□□□ -0.57
VCL-205ENST00000478896 SELENONQ9NZV5 590 aa11.47□□□□□ -0.57
VCL-205ENST00000478896 B3GAT1Q9P2W7 334 aa11.47□□□□□ -0.57
VCL-205ENST00000478896 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.47□□□□□ -0.572e-7■■■■□ 25
VCL-205ENST00000478896 TMEM120BA0PK00 339 aa11.46□□□□□ -0.57
VCL-205ENST00000478896 CLIC1O00299 241 aa11.46□□□□□ -0.57
VCL-205ENST00000478896 UBDO15205 165 aa11.46□□□□□ -0.57
VCL-205ENST00000478896 TCF21O43680 179 aa11.46□□□□□ -0.57
VCL-205ENST00000478896 SNNO75324 88 aaPredicted RBP11.46□□□□□ -0.57
VCL-205ENST00000478896 ZNF432O94892 652 aa11.46□□□□□ -0.57
VCL-205ENST00000478896 TACSTD2P09758 323 aa11.46□□□□□ -0.57
VCL-205ENST00000478896 NUDT7P0C024 238 aa11.46□□□□□ -0.57
VCL-205ENST00000478896 CD79AP11912 226 aa11.46□□□□□ -0.57
VCL-205ENST00000478896 IFNGR1P15260 489 aa11.46□□□□□ -0.57
VCL-205ENST00000478896 GIFP27352 417 aa11.46□□□□□ -0.57
VCL-205ENST00000478896 GRPRP30550 384 aa11.46□□□□□ -0.57
VCL-205ENST00000478896 IL2RGP31785 369 aa11.46□□□□□ -0.57
VCL-205ENST00000478896 FADDQ13158 208 aa11.46□□□□□ -0.57
VCL-205ENST00000478896 CCNIQ14094 377 aa11.46□□□□□ -0.57
VCL-205ENST00000478896 RGNQ15493 299 aa11.46□□□□□ -0.57
VCL-205ENST00000478896 SLC9B1Q4ZJI4 515 aa11.46□□□□□ -0.57
VCL-205ENST00000478896 TNFAIP8L3Q5GJ75 292 aa11.46□□□□□ -0.57
VCL-205ENST00000478896 ALG10BQ5I7T1 473 aa11.46□□□□□ -0.57
VCL-205ENST00000478896 C6orf89Q6UWU4 347 aa11.46□□□□□ -0.57
VCL-205ENST00000478896 CROCCP2Q86T23 111 aa11.46□□□□□ -0.57
VCL-205ENST00000478896 UEVLDQ8IX04 471 aa11.46□□□□□ -0.57
VCL-205ENST00000478896 CCDC36Q8IYA8 594 aa11.46□□□□□ -0.57
VCL-205ENST00000478896 CDK20Q8IZL9 346 aa11.46□□□□□ -0.57
VCL-205ENST00000478896 MIER2Q8N344 545 aa11.46□□□□□ -0.57
VCL-205ENST00000478896 RFLNBQ8N5W9 214 aa11.46□□□□□ -0.57
VCL-205ENST00000478896 LINC01356Q8N9X3 169 aa11.46□□□□□ -0.57
VCL-205ENST00000478896 IL17RDQ8NFM7 739 aa11.46□□□□□ -0.57
VCL-205ENST00000478896 UBASH3BQ8TF42 649 aa11.46□□□□□ -0.57
VCL-205ENST00000478896 SLC35B4Q969S0 331 aa11.46□□□□□ -0.57
VCL-205ENST00000478896 ZNF837Q96EG3 531 aaPredicted RBP11.46□□□□□ -0.57
VCL-205ENST00000478896 MAELQ96JY0 434 aaKnown RBP11.46□□□□□ -0.57
VCL-205ENST00000478896 DOK1Q99704 481 aa11.46□□□□□ -0.57
VCL-205ENST00000478896 C12orf10Q9HB07 376 aa11.46□□□□□ -0.57
VCL-205ENST00000478896 NOX3Q9HBY0 568 aa11.46□□□□□ -0.57
VCL-205ENST00000478896 B3GAT2Q9NPZ5 323 aa11.46□□□□□ -0.57
VCL-205ENST00000478896 SDR39U1Q9NRG7 319 aaPredicted RBP11.46□□□□□ -0.57
VCL-205ENST00000478896 TMEFF2Q9UIK5 374 aaPredicted RBP11.46□□□□□ -0.57
VCL-205ENST00000478896 CMAHPQ9Y471 501 aa11.46□□□□□ -0.57
VCL-205ENST00000478896 TRAV36DV7A0A075B6V5 113 aa11.45□□□□□ -0.58
VCL-205ENST00000478896 ZNF503-AS2A6NEH8 195 aa11.45□□□□□ -0.58
VCL-205ENST00000478896 ADRA2AP08913 450 aa11.45□□□□□ -0.58
VCL-205ENST00000478896 PRKAR1BP31321 381 aa11.45□□□□□ -0.58
VCL-205ENST00000478896 WDR4P57081 412 aaKnown RBP11.45□□□□□ -0.58
VCL-205ENST00000478896 STX1BP61266 288 aa11.45□□□□□ -0.58
VCL-205ENST00000478896 POU3F1Q03052 451 aaPredicted RBP11.45□□□□□ -0.58
VCL-205ENST00000478896 TRIP10Q15642 601 aa11.45□□□□□ -0.58
VCL-205ENST00000478896 GSG1Q2KHT4 349 aa11.45□□□□□ -0.58
VCL-205ENST00000478896 SLC2A7Q6PXP3 512 aa11.45□□□□□ -0.58
VCL-205ENST00000478896 RINLQ6ZS11 566 aa11.45□□□□□ -0.58
VCL-205ENST00000478896 H1FNTQ75WM6 255 aaPredicted RBP11.45□□□□□ -0.58
VCL-205ENST00000478896 ZNF786Q8N393 782 aa11.45□□□□□ -0.58
VCL-205ENST00000478896 GOLGA6L1Q8N7Z2 621 aa11.45□□□□□ -0.58
VCL-205ENST00000478896 NFKBIDQ8NI38 313 aa11.45□□□□□ -0.58
VCL-205ENST00000478896 DNAJA4Q8WW22 397 aaPredicted RBP11.45□□□□□ -0.58
VCL-205ENST00000478896 HPS1Q92902 700 aa11.45□□□□□ -0.58
VCL-205ENST00000478896 TAAR8Q969N4 342 aa11.45□□□□□ -0.58
VCL-205ENST00000478896 OR2M2Q96R28 347 aa11.45□□□□□ -0.58
VCL-205ENST00000478896 ASPNQ9BXN1 380 aa11.45□□□□□ -0.58
VCL-205ENST00000478896 PARD6BQ9BYG5 372 aa11.45□□□□□ -0.58
VCL-205ENST00000478896 BCL2L10Q9HD36 194 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms