RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 DBIP07108 87 aaKnown RBP14.72□□□□□ -0.05
VIM-204ENST00000478746 GKN3PP0CG01 181 aa14.72□□□□□ -0.05
VIM-204ENST00000478746 ADRA2CP18825 462 aa14.72□□□□□ -0.05
VIM-204ENST00000478746 COPZ1P61923 177 aa14.72□□□□□ -0.05
VIM-204ENST00000478746 MAD2L1BPQ15013 274 aaPredicted RBP14.72□□□□□ -0.05
VIM-204ENST00000478746 GKAP1Q5VSY0 366 aaPredicted RBP14.72□□□□□ -0.05
VIM-204ENST00000478746 ANXA8L1Q5VT79 327 aa14.72□□□□□ -0.05
VIM-204ENST00000478746 WBP2NLQ6ICG8 309 aa14.72□□□□□ -0.05
VIM-204ENST00000478746 LRRC74BQ6ZQY2 392 aa14.72□□□□□ -0.05
VIM-204ENST00000478746 LRRC17Q8N6Y2 441 aa14.72□□□□□ -0.05
VIM-204ENST00000478746 SLC25A36Q96CQ1 311 aa14.72□□□□□ -0.05
VIM-204ENST00000478746 PPCSQ9HAB8 311 aa14.72□□□□□ -0.05
VIM-204ENST00000478746 RLIMQ9NVW2 624 aa14.72□□□□□ -0.05
VIM-204ENST00000478746 B3GNT2Q9NY97 397 aa14.72□□□□□ -0.05
VIM-204ENST00000478746 NOP53Q9NZM5 478 aaKnown RBP14.72□□□□□ -0.05
VIM-204ENST00000478746 DUSP13Q9UII6 198 aa14.72□□□□□ -0.05
VIM-204ENST00000478746 ZDHHC2Q9UIJ5 367 aa14.72□□□□□ -0.05
VIM-204ENST00000478746 RCE1Q9Y256 329 aa14.72□□□□□ -0.05
VIM-204ENST00000478746 PPIAL4AQ9Y536 164 aa14.72□□□□□ -0.05
VIM-204ENST00000478746 J3QLI3 93 aa14.71□□□□□ -0.05
VIM-204ENST00000478746 RP2O75695 350 aa14.71□□□□□ -0.05
VIM-204ENST00000478746 NCR1O76036 304 aa14.71□□□□□ -0.05
VIM-204ENST00000478746 HLA-HP01893 362 aa14.71□□□□□ -0.05
VIM-204ENST00000478746 ARAFP10398 606 aa14.71□□□□□ -0.05
VIM-204ENST00000478746 NAT2P11245 290 aa14.71□□□□□ -0.05
VIM-204ENST00000478746 CD79AP11912 226 aa14.71□□□□□ -0.05
VIM-204ENST00000478746 ZNF35P13682 527 aa14.71□□□□□ -0.05
VIM-204ENST00000478746 RPS4Y1P22090 263 aaKnown RBP14.71□□□□□ -0.05
VIM-204ENST00000478746 ACAA2P42765 397 aaKnown RBP14.71□□□□□ -0.05
VIM-204ENST00000478746 DCAF12L2Q5VW00 463 aa14.71□□□□□ -0.05
VIM-204ENST00000478746 GSPT2Q8IYD1 628 aaKnown RBP14.71□□□□□ -0.05
VIM-204ENST00000478746 MFSD8Q8NHS3 518 aa14.71□□□□□ -0.05
VIM-204ENST00000478746 MS4A3Q96HJ5 214 aa14.71□□□□□ -0.05
VIM-204ENST00000478746 OXGR1Q96P68 337 aa14.71□□□□□ -0.05
VIM-204ENST00000478746 SLC35A5Q9BS91 424 aa14.71□□□□□ -0.05
VIM-204ENST00000478746 MECRQ9BV79 373 aa14.71□□□□□ -0.05
VIM-204ENST00000478746 ZNF385DQ9H6B1 395 aa14.71□□□□□ -0.05
VIM-204ENST00000478746 MYEF2Q9P2K5 600 aaKnown RBP14.71□□□□□ -0.05
VIM-204ENST00000478746 FZR1Q9UM11 496 aa14.71□□□□□ -0.05
VIM-204ENST00000478746 ZNF99A8MXY4 864 aaPredicted RBP14.7□□□□□ -0.06
VIM-204ENST00000478746 SEC14L2O76054 403 aa14.7□□□□□ -0.06
VIM-204ENST00000478746 AHSA1O95433 338 aa14.7□□□□□ -0.06
VIM-204ENST00000478746 NR2F1P10589 423 aa14.7□□□□□ -0.06
VIM-204ENST00000478746 PNMTP11086 282 aa14.7□□□□□ -0.06
VIM-204ENST00000478746 RPS23P62266 143 aaKnown RBP14.7□□□□□ -0.06
VIM-204ENST00000478746 GALK2Q01415 458 aa14.7□□□□□ -0.06
VIM-204ENST00000478746 MVKQ03426 396 aa14.7□□□□□ -0.06
VIM-204ENST00000478746 PIGFQ07326 219 aa14.7□□□□□ -0.06
VIM-204ENST00000478746 C1DQ13901 141 aaKnown RBP14.7□□□□□ -0.06
VIM-204ENST00000478746 GSG1Q2KHT4 349 aa14.7□□□□□ -0.06
VIM-204ENST00000478746 RBMS3Q6XE24 437 aaKnown RBP14.7□□□□□ -0.06
VIM-204ENST00000478746 RNF130Q86XS8 419 aa14.7□□□□□ -0.06
VIM-204ENST00000478746 PEX5LQ8IYB4 626 aa14.7□□□□□ -0.06
VIM-204ENST00000478746 PIK3C3Q8NEB9 887 aa14.7□□□□□ -0.06
VIM-204ENST00000478746 RNF217Q8TC41 542 aa14.7□□□□□ -0.06
VIM-204ENST00000478746 STK35Q8TDR2 534 aa14.7□□□□□ -0.06
VIM-204ENST00000478746 C22orf15Q8WYQ4 148 aa14.7□□□□□ -0.06
VIM-204ENST00000478746 RAB39BQ96DA2 213 aa14.7□□□□□ -0.06
VIM-204ENST00000478746 ASIC5Q9NY37 505 aa14.7□□□□□ -0.06
VIM-204ENST00000478746 ZNF346Q9UL40 294 aaKnown RBP14.7□□□□□ -0.06
VIM-204ENST00000478746 CORINQ9Y5Q5 1042 aa14.7□□□□□ -0.06
VIM-204ENST00000478746 VWFP04275 2813 aa14.69□□□□□ -0.06
VIM-204ENST00000478746 A0A096LPI6 279 aa14.69□□□□□ -0.06
VIM-204ENST00000478746 A0A1W2PPW3 197 aa14.69□□□□□ -0.06
VIM-204ENST00000478746 CDC14BO60729 498 aa14.69□□□□□ -0.06
VIM-204ENST00000478746 NPIPB7O75200 414 aa14.69□□□□□ -0.06
VIM-204ENST00000478746 PRSS23O95084 383 aa14.69□□□□□ -0.06
VIM-204ENST00000478746 C1QCP02747 245 aa14.69□□□□□ -0.06
VIM-204ENST00000478746 ZNF14P17017 642 aaPredicted RBP14.69□□□□□ -0.06
VIM-204ENST00000478746 GTF2E2P29084 291 aaKnown RBP14.69□□□□□ -0.06
VIM-204ENST00000478746 ANXA11P50995 505 aaKnown RBP14.69□□□□□ -0.06
VIM-204ENST00000478746 ZP4Q12836 540 aa14.69□□□□□ -0.06
VIM-204ENST00000478746 CASP8Q14790 479 aa14.69□□□□□ -0.06
VIM-204ENST00000478746 FXNQ16595 210 aa14.69□□□□□ -0.06
VIM-204ENST00000478746 SMU1Q2TAY7 513 aa14.69□□□□□ -0.06
VIM-204ENST00000478746 GLIPR1L2Q4G1C9 344 aa14.69□□□□□ -0.06
VIM-204ENST00000478746 AVPI1Q5T686 147 aa14.69□□□□□ -0.06
VIM-204ENST00000478746 ATG16L1Q676U5 607 aa14.69□□□□□ -0.06
VIM-204ENST00000478746 MGARPQ8TDB4 240 aa14.69□□□□□ -0.06
VIM-204ENST00000478746 EPS8L3Q8TE67 593 aaKnown RBP14.69□□□□□ -0.06
VIM-204ENST00000478746 UBLCP1Q8WVY7 318 aaPredicted RBP14.69□□□□□ -0.06
VIM-204ENST00000478746 C7orf69Q9H7B7 122 aa14.69□□□□□ -0.06
VIM-204ENST00000478746 CDHR4A6H8M9 788 aa14.68□□□□□ -0.06
VIM-204ENST00000478746 FTCDNL1E5RQL4 147 aa14.68□□□□□ -0.06
VIM-204ENST00000478746 M0R3G1 203 aa14.68□□□□□ -0.06
VIM-204ENST00000478746 NCF2P19878 526 aaPredicted RBP14.68□□□□□ -0.06
VIM-204ENST00000478746 MAGEB1P43366 347 aa14.68□□□□□ -0.06
VIM-204ENST00000478746 RPS5P46782 204 aaKnown RBP14.68□□□□□ -0.06
VIM-204ENST00000478746 ALKBH6Q3KRA9 238 aa14.68□□□□□ -0.06
VIM-204ENST00000478746 VRK2Q86Y07 508 aa14.68□□□□□ -0.06
VIM-204ENST00000478746 ZNF75AQ96N20 296 aa14.68□□□□□ -0.06
VIM-204ENST00000478746 OR2M2Q96R28 347 aa14.68□□□□□ -0.06
VIM-204ENST00000478746 UNKLQ9H9P5 680 aaKnown RBP14.68□□□□□ -0.06
VIM-204ENST00000478746 DEAF1O75398 565 aaPredicted RBP14.67□□□□□ -0.06
VIM-204ENST00000478746 GATA3P23771 443 aa14.67□□□□□ -0.06
VIM-204ENST00000478746 ARRB2P32121 409 aa14.67□□□□□ -0.06
VIM-204ENST00000478746 SERPINB5P36952 375 aa14.67□□□□□ -0.06
VIM-204ENST00000478746 PTDSS1P48651 473 aaKnown RBP14.67□□□□□ -0.06
VIM-204ENST00000478746 CCL8P80075 99 aa14.67□□□□□ -0.06
VIM-204ENST00000478746 TXNL4AP83876 142 aaKnown RBP14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms