RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 PRPF19Q9UMS4 504 aaKnown RBP4.05□□□□□ -1.76
SMC5-203ENST00000475540 OARD1Q9Y530 152 aa4.05□□□□□ -1.76
SMC5-203ENST00000475540 GTF3C1Q12789 2109 aa4.04□□□□□ -1.76
SMC5-203ENST00000475540 TRAV25A0A0B4J276 109 aa4.04□□□□□ -1.76
SMC5-203ENST00000475540 TRBV11-1A0A0K0K1C0 115 aa4.04□□□□□ -1.76
SMC5-203ENST00000475540 A0A1B0GUA9 196 aa4.04□□□□□ -1.76
SMC5-203ENST00000475540 A0A1W2PPE3 182 aa4.04□□□□□ -1.76
SMC5-203ENST00000475540 TRDMT1O14717 391 aaKnown RBP4.04□□□□□ -1.76
SMC5-203ENST00000475540 SUPT7LO94864 414 aa4.04□□□□□ -1.76
SMC5-203ENST00000475540 H6PDO95479 791 aa4.04□□□□□ -1.76
SMC5-203ENST00000475540 IVLP07476 585 aa4.04□□□□□ -1.76
SMC5-203ENST00000475540 CPN2P22792 545 aa4.04□□□□□ -1.76
SMC5-203ENST00000475540 CD1CP29017 333 aa4.04□□□□□ -1.76
SMC5-203ENST00000475540 GNA11P29992 359 aa4.04□□□□□ -1.76
SMC5-203ENST00000475540 ATP5C1P36542 298 aaKnown RBP4.04□□□□□ -1.76
SMC5-203ENST00000475540 ANP32AP39687 249 aaKnown RBP4.04□□□□□ -1.76
SMC5-203ENST00000475540 HADHBP55084 474 aaKnown RBP4.04□□□□□ -1.76
SMC5-203ENST00000475540 KLRB1Q12918 225 aa4.04□□□□□ -1.76
SMC5-203ENST00000475540 GK3PQ14409 553 aa4.04□□□□□ -1.76
SMC5-203ENST00000475540 ALKBH6Q3KRA9 238 aa4.04□□□□□ -1.76
SMC5-203ENST00000475540 SLC25A52Q3SY17 297 aa4.04□□□□□ -1.76
SMC5-203ENST00000475540 PLCXD3Q63HM9 321 aa4.04□□□□□ -1.76
SMC5-203ENST00000475540 PVRIGQ6DKI7 326 aa4.04□□□□□ -1.76
SMC5-203ENST00000475540 TMEM53Q6P2H8 277 aa4.04□□□□□ -1.76
SMC5-203ENST00000475540 GLYATL2Q8WU03 294 aa4.04□□□□□ -1.76
SMC5-203ENST00000475540 PRRC1Q96M27 445 aa4.04□□□□□ -1.76
SMC5-203ENST00000475540 ZNF578Q96N58 590 aaPredicted RBP4.04□□□□□ -1.76
SMC5-203ENST00000475540 RGCCQ9H4X1 137 aa4.04□□□□□ -1.76
SMC5-203ENST00000475540 C20orf96Q9NUD7 363 aaPredicted RBP4.04□□□□□ -1.76
SMC5-203ENST00000475540 ZNHIT6Q9NWK9 470 aaKnown RBP4.04□□□□□ -1.76
SMC5-203ENST00000475540 SIGLEC8Q9NYZ4 499 aa4.04□□□□□ -1.76
SMC5-203ENST00000475540 PITPNC1Q9UKF7 332 aa4.04□□□□□ -1.76
SMC5-203ENST00000475540 TBC1D24Q9ULP9 559 aa4.04□□□□□ -1.76
SMC5-203ENST00000475540 IGHV1OR15-1A0A075B7D0 117 aa4.03□□□□□ -1.76
SMC5-203ENST00000475540 A0A0J9YXY3 114 aa4.03□□□□□ -1.76
SMC5-203ENST00000475540 KIF2AO00139 706 aaPredicted RBP4.03□□□□□ -1.76
SMC5-203ENST00000475540 MAGEB4O15481 346 aaPredicted RBP4.03□□□□□ -1.76
SMC5-203ENST00000475540 RS1O15537 224 aa4.03□□□□□ -1.76
SMC5-203ENST00000475540 RNF113AO15541 343 aaKnown RBP4.03□□□□□ -1.76
SMC5-203ENST00000475540 CHMP2AO43633 222 aa4.03□□□□□ -1.76
SMC5-203ENST00000475540 RAMP3O60896 148 aa4.03□□□□□ -1.76
SMC5-203ENST00000475540 DIRAS1O95057 198 aa4.03□□□□□ -1.76
SMC5-203ENST00000475540 AP2A1O95782 977 aa4.03□□□□□ -1.76
SMC5-203ENST00000475540 PLEKP08567 350 aaPredicted RBP4.03□□□□□ -1.76
SMC5-203ENST00000475540 HMGB2P26583 209 aaKnown RBP4.03□□□□□ -1.76
SMC5-203ENST00000475540 GCAP28676 217 aa4.03□□□□□ -1.76
SMC5-203ENST00000475540 NAMPTP43490 491 aa4.03□□□□□ -1.76
SMC5-203ENST00000475540 CRYBB1P53674 252 aaPredicted RBP4.03□□□□□ -1.76
SMC5-203ENST00000475540 RAB40BQ12829 278 aa4.03□□□□□ -1.76
SMC5-203ENST00000475540 HSP90B2PQ58FF3 399 aa4.03□□□□□ -1.76
SMC5-203ENST00000475540 SCD5Q86SK9 330 aa4.03□□□□□ -1.76
SMC5-203ENST00000475540 MAGEE2Q8TD90 523 aaPredicted RBP4.03□□□□□ -1.76
SMC5-203ENST00000475540 C7orf33Q8WU49 177 aa4.03□□□□□ -1.76
SMC5-203ENST00000475540 UBE2E3Q969T4 207 aa4.03□□□□□ -1.76
SMC5-203ENST00000475540 TIMD4Q96H15 378 aa4.03□□□□□ -1.76
SMC5-203ENST00000475540 SPATA16Q9BXB7 569 aa4.03□□□□□ -1.76
SMC5-203ENST00000475540 RAB34Q9BZG1 259 aa4.03□□□□□ -1.76
SMC5-203ENST00000475540 PPDPFQ9H3Y8 114 aa4.03□□□□□ -1.76
SMC5-203ENST00000475540 ANKRD19PQ9H560 264 aa4.03□□□□□ -1.76
SMC5-203ENST00000475540 SMYD3Q9H7B4 428 aa4.03□□□□□ -1.76
SMC5-203ENST00000475540 VCPKMTQ9H867 229 aa4.03□□□□□ -1.76
SMC5-203ENST00000475540 ZNF331Q9NQX6 463 aaPredicted RBP4.03□□□□□ -1.76
SMC5-203ENST00000475540 PAK1IP1Q9NWT1 392 aaPredicted RBP4.03□□□□□ -1.76
SMC5-203ENST00000475540 ZMAT5Q9UDW3 170 aaKnown RBP4.03□□□□□ -1.76
SMC5-203ENST00000475540 VANGL2Q9ULK5 521 aa4.03□□□□□ -1.76
SMC5-203ENST00000475540 RAB26Q9ULW5 256 aa4.03□□□□□ -1.76
SMC5-203ENST00000475540 STARD10Q9Y365 291 aa4.03□□□□□ -1.76
SMC5-203ENST00000475540 AK6Q9Y3D8 172 aaKnown RBP4.03□□□□□ -1.76
SMC5-203ENST00000475540 PEX16Q9Y5Y5 336 aa4.03□□□□□ -1.76
SMC5-203ENST00000475540 KIF27Q86VH2 1401 aa4.03□□□□□ -1.76
SMC5-203ENST00000475540 PLEKHG1Q9ULL1 1385 aa4.02□□□□□ -1.77
SMC5-203ENST00000475540 LOC100653049A0A140TA62 436 aa4.02□□□□□ -1.77
SMC5-203ENST00000475540 ZNF701M0R085 212 aaPredicted RBP4.02□□□□□ -1.77
SMC5-203ENST00000475540 UGT2B17O75795 530 aa4.02□□□□□ -1.77
SMC5-203ENST00000475540 KRT34O76011 436 aa4.02□□□□□ -1.77
SMC5-203ENST00000475540 OR2F2O95006 317 aa4.02□□□□□ -1.77
SMC5-203ENST00000475540 CRYGCP07315 174 aa4.02□□□□□ -1.77
SMC5-203ENST00000475540 ERCC1P07992 297 aaPredicted RBP4.02□□□□□ -1.77
SMC5-203ENST00000475540 CCNB1P14635 433 aa4.02□□□□□ -1.77
SMC5-203ENST00000475540 GCFC2P16383 781 aaKnown RBP4.02□□□□□ -1.77
SMC5-203ENST00000475540 ZNF24P17028 368 aa4.02□□□□□ -1.77
SMC5-203ENST00000475540 CSNK1EP49674 416 aaKnown RBP4.02□□□□□ -1.77
SMC5-203ENST00000475540 ACLYP53396 1101 aa4.02□□□□□ -1.77
SMC5-203ENST00000475540 TGFBIQ15582 683 aa4.02□□□□□ -1.77
SMC5-203ENST00000475540 NDUFA9Q16795 377 aa4.02□□□□□ -1.77
SMC5-203ENST00000475540 HIKESHIQ53FT3 197 aa4.02□□□□□ -1.77
SMC5-203ENST00000475540 C1orf220Q5T0J3 134 aa4.02□□□□□ -1.77
SMC5-203ENST00000475540 AGBL2Q5U5Z8 902 aa4.02□□□□□ -1.77
SMC5-203ENST00000475540 SLC8B1Q6J4K2 584 aa4.02□□□□□ -1.77
SMC5-203ENST00000475540 TMEM220Q6QAJ8 160 aa4.02□□□□□ -1.77
SMC5-203ENST00000475540 UQCC3Q6UW78 93 aa4.02□□□□□ -1.77
SMC5-203ENST00000475540 MFSD6LQ8IWD5 586 aa4.02□□□□□ -1.77
SMC5-203ENST00000475540 SKA3Q8IX90 412 aa4.02□□□□□ -1.77
SMC5-203ENST00000475540 GABRG1Q8N1C3 465 aa4.02□□□□□ -1.77
SMC5-203ENST00000475540 TMEM252Q8N6L7 170 aa4.02□□□□□ -1.77
SMC5-203ENST00000475540 OR5L2Q8NGL0 311 aa4.02□□□□□ -1.77
SMC5-203ENST00000475540 OR1L6Q8NGR2 347 aa4.02□□□□□ -1.77
SMC5-203ENST00000475540 TMEM101Q96IK0 257 aa4.02□□□□□ -1.77
SMC5-203ENST00000475540 OR5B2Q96R09 309 aa4.02□□□□□ -1.77
SMC5-203ENST00000475540 CLCC1Q96S66 551 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms