RNA–Protein interactions for RNA: ENST00000475506.1

SDHB-205, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 2

Gene SDHB, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-205ENST00000475506 MFFQ9GZY8 342 aa4.06□□□□□ -1.76
SDHB-205ENST00000475506 UGT1A10Q9HAW8 530 aa4.06□□□□□ -1.76
SDHB-205ENST00000475506 TREM2Q9NZC2 230 aa4.06□□□□□ -1.76
SDHB-205ENST00000475506 AHSPQ9NZD4 102 aa4.06□□□□□ -1.76
SDHB-205ENST00000475506 CHTOPQ9Y3Y2 248 aaKnown RBP4.06□□□□□ -1.76
SDHB-205ENST00000475506 ABCA7Q8IZY2 2146 aa4.06□□□□□ -1.76
SDHB-205ENST00000475506 IGHV3OR16-13A0A075B7E8 117 aa4.05□□□□□ -1.76
SDHB-205ENST00000475506 RBMY1BA6NDE4 496 aaKnown RBP4.05□□□□□ -1.76
SDHB-205ENST00000475506 RBMY1EA6NEQ0 496 aaKnown RBP4.05□□□□□ -1.76
SDHB-205ENST00000475506 GOLGA8TH3BQL2 631 aa4.05□□□□□ -1.76
SDHB-205ENST00000475506 CCL21O00585 134 aa4.05□□□□□ -1.76
SDHB-205ENST00000475506 CHST1O43916 411 aa4.05□□□□□ -1.76
SDHB-205ENST00000475506 FGF1P05230 155 aa4.05□□□□□ -1.76
SDHB-205ENST00000475506 RBMY1DP0C7P1 496 aaKnown RBP4.05□□□□□ -1.76
SDHB-205ENST00000475506 RBMY1A1P0DJD3 496 aaKnown RBP4.05□□□□□ -1.76
SDHB-205ENST00000475506 NTSP30990 170 aa4.05□□□□□ -1.76
SDHB-205ENST00000475506 BTDP43251 543 aa4.05□□□□□ -1.76
SDHB-205ENST00000475506 MAGEA1P43355 309 aa4.05□□□□□ -1.76
SDHB-205ENST00000475506 KIR2DS4P43632 304 aa4.05□□□□□ -1.76
SDHB-205ENST00000475506 SLC11A1P49279 550 aa4.05□□□□□ -1.76
SDHB-205ENST00000475506 GPX6P59796 221 aa4.05□□□□□ -1.76
SDHB-205ENST00000475506 MRPS22P82650 360 aaKnown RBP4.05□□□□□ -1.76
SDHB-205ENST00000475506 TGFBR3Q03167 851 aa4.05□□□□□ -1.76
SDHB-205ENST00000475506 LIPEQ05469 1076 aa4.05□□□□□ -1.76
SDHB-205ENST00000475506 SELENBP1Q13228 472 aa4.05□□□□□ -1.76
SDHB-205ENST00000475506 MAB21L1Q13394 359 aa4.05□□□□□ -1.76
SDHB-205ENST00000475506 ITIH4Q14624 930 aa4.05□□□□□ -1.76
SDHB-205ENST00000475506 C15orf32Q32M92 178 aa4.05□□□□□ -1.76
SDHB-205ENST00000475506 PRR30Q53SZ7 412 aaPredicted RBP4.05□□□□□ -1.76
SDHB-205ENST00000475506 SOHLH1Q5JUK2 328 aa4.05□□□□□ -1.76
SDHB-205ENST00000475506 TIGD3Q6B0B8 471 aa4.05□□□□□ -1.76
SDHB-205ENST00000475506 MOB1BQ7L9L4 216 aa4.05□□□□□ -1.76
SDHB-205ENST00000475506 ZNF546Q86UE3 836 aa4.05□□□□□ -1.76
SDHB-205ENST00000475506 FBXO16Q8IX29 292 aaPredicted RBP4.05□□□□□ -1.76
SDHB-205ENST00000475506 PRR22Q8IZ63 422 aa4.05□□□□□ -1.76
SDHB-205ENST00000475506 FBXL13Q8NEE6 735 aa4.05□□□□□ -1.76
SDHB-205ENST00000475506 RHOXF1Q8NHV9 184 aa4.05□□□□□ -1.76
SDHB-205ENST00000475506 SORT1Q99523 831 aa4.05□□□□□ -1.76
SDHB-205ENST00000475506 NAT9Q9BTE0 207 aa4.05□□□□□ -1.76
SDHB-205ENST00000475506 SELENOIQ9C0D9 397 aa4.05□□□□□ -1.76
SDHB-205ENST00000475506 CWH43Q9H720 699 aa4.05□□□□□ -1.76
SDHB-205ENST00000475506 FGF20Q9NP95 211 aaPredicted RBP4.05□□□□□ -1.76
SDHB-205ENST00000475506 ADAP2Q9NPF8 381 aa4.05□□□□□ -1.76
SDHB-205ENST00000475506 LSM7Q9UK45 103 aaKnown RBP4.05□□□□□ -1.76
SDHB-205ENST00000475506 ZNF256Q9Y2P7 627 aaPredicted RBP4.05□□□□□ -1.76
SDHB-205ENST00000475506 USP47Q96K76 1375 aa4.04□□□□□ -1.76
SDHB-205ENST00000475506 ARPC4-TTLL3A0A0A6YYG9 625 aa4.04□□□□□ -1.76
SDHB-205ENST00000475506 SMCO2A6NFE2 343 aa4.04□□□□□ -1.76
SDHB-205ENST00000475506 SPECC1L-ADORA2AF8WAN1 911 aa4.04□□□□□ -1.76
SDHB-205ENST00000475506 TIMP1P01033 207 aa4.04□□□□□ -1.76
SDHB-205ENST00000475506 CCNB1P14635 433 aa4.04□□□□□ -1.76
SDHB-205ENST00000475506 TBPP20226 339 aa4.04□□□□□ -1.76
SDHB-205ENST00000475506 GSTM3P21266 225 aa4.04□□□□□ -1.76
SDHB-205ENST00000475506 BTCP35070 178 aa4.04□□□□□ -1.76
SDHB-205ENST00000475506 CDKN1BP46527 198 aa4.04□□□□□ -1.76
SDHB-205ENST00000475506 CCNHP51946 323 aaPredicted RBP4.04□□□□□ -1.76
SDHB-205ENST00000475506 EIF3EP60228 445 aaKnown RBP4.04□□□□□ -1.76
SDHB-205ENST00000475506 TLE4Q04727 773 aa4.04□□□□□ -1.76
SDHB-205ENST00000475506 PDIA2Q13087 525 aaKnown RBP4.04□□□□□ -1.76
SDHB-205ENST00000475506 DOC2AQ14183 400 aa4.04□□□□□ -1.76
SDHB-205ENST00000475506 HIKESHIQ53FT3 197 aa4.04□□□□□ -1.76
SDHB-205ENST00000475506 ZNF658Q5TYW1 1059 aaPredicted RBP4.04□□□□□ -1.76
SDHB-205ENST00000475506 AGBL2Q5U5Z8 902 aa4.04□□□□□ -1.76
SDHB-205ENST00000475506 MARC1Q5VT66 337 aa4.04□□□□□ -1.76
SDHB-205ENST00000475506 Q6ZN92 141 aa4.04□□□□□ -1.76
SDHB-205ENST00000475506 ZNF571Q7Z3V5 609 aaPredicted RBP4.04□□□□□ -1.76
SDHB-205ENST00000475506 APOBEC3FQ8IUX4 373 aaKnown RBP4.04□□□□□ -1.76
SDHB-205ENST00000475506 GABRG1Q8N1C3 465 aa4.04□□□□□ -1.76
SDHB-205ENST00000475506 TMEM252Q8N6L7 170 aa4.04□□□□□ -1.76
SDHB-205ENST00000475506 OR4A4PQ8NGN8 299 aa4.04□□□□□ -1.76
SDHB-205ENST00000475506 MARCH1Q8TCQ1 289 aa4.04□□□□□ -1.76
SDHB-205ENST00000475506 FGF14Q92915 247 aa4.04□□□□□ -1.76
SDHB-205ENST00000475506 SMARCD2Q92925 531 aa4.04□□□□□ -1.76
SDHB-205ENST00000475506 NEIL2Q969S2 332 aa4.04□□□□□ -1.76
SDHB-205ENST00000475506 ISG20Q96AZ6 181 aaKnown RBP4.04□□□□□ -1.76
SDHB-205ENST00000475506 PRRC1Q96M27 445 aa4.04□□□□□ -1.76
SDHB-205ENST00000475506 ANKRD60Q9BZ19 345 aa4.04□□□□□ -1.76
SDHB-205ENST00000475506 DNTTIP1Q9H147 329 aa4.04□□□□□ -1.76
SDHB-205ENST00000475506 DCDC2Q9UHG0 476 aa4.04□□□□□ -1.76
SDHB-205ENST00000475506 TRAF3IP3Q9Y228 551 aa4.04□□□□□ -1.76
SDHB-205ENST00000475506 PPP1R2P9O14990 202 aa4.03□□□□□ -1.76
SDHB-205ENST00000475506 FGGP02679 453 aa4.03□□□□□ -1.76
SDHB-205ENST00000475506 P0C879 139 aa4.03□□□□□ -1.76
SDHB-205ENST00000475506 POLR2MP0CAP2 368 aa4.03□□□□□ -1.76
SDHB-205ENST00000475506 STOMP27105 288 aa4.03□□□□□ -1.76
SDHB-205ENST00000475506 DCKP27707 260 aa4.03□□□□□ -1.76
SDHB-205ENST00000475506 HSD17B2P37059 387 aa4.03□□□□□ -1.76
SDHB-205ENST00000475506 NPBWR2P48146 333 aa4.03□□□□□ -1.76
SDHB-205ENST00000475506 TFPI2P48307 235 aa4.03□□□□□ -1.76
SDHB-205ENST00000475506 TMED10P49755 219 aaKnown RBP4.03□□□□□ -1.76
SDHB-205ENST00000475506 VEGFCP49767 419 aa4.03□□□□□ -1.76
SDHB-205ENST00000475506 RAB10P61026 200 aa4.03□□□□□ -1.76
SDHB-205ENST00000475506 UTF1Q5T230 341 aa4.03□□□□□ -1.76
SDHB-205ENST00000475506 REEP3Q6NUK4 255 aa4.03□□□□□ -1.76
SDHB-205ENST00000475506 HSD17B13Q7Z5P4 300 aaPredicted RBP4.03□□□□□ -1.76
SDHB-205ENST00000475506 GTSCR1Q86UQ5 136 aa4.03□□□□□ -1.76
SDHB-205ENST00000475506 PUSL1Q8N0Z8 303 aaKnown RBP4.03□□□□□ -1.76
SDHB-205ENST00000475506 FNDC5Q8NAU1 212 aa4.03□□□□□ -1.76
SDHB-205ENST00000475506 FAM184AQ8NB25 1140 aa4.03□□□□□ -1.76
SDHB-205ENST00000475506 OR10G3Q8NGC4 313 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms