RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 LAX1Q8IWV1 398 aa10.16□□□□□ -0.78
VAPB-204ENST00000475243 ANKLE1Q8NAG6 615 aa10.16□□□□□ -0.78
VAPB-204ENST00000475243 GHSRQ92847 366 aa10.16□□□□□ -0.78
VAPB-204ENST00000475243 RANGRFQ9HD47 186 aaPredicted RBP10.16□□□□□ -0.78
VAPB-204ENST00000475243 STEAP1Q9UHE8 339 aa10.16□□□□□ -0.78
VAPB-204ENST00000475243 HSD17B6O14756 317 aa10.16□□□□□ -0.78
VAPB-204ENST00000475243 CHRNB1P11230 501 aa10.16□□□□□ -0.78
VAPB-204ENST00000475243 ENPP1P22413 925 aa10.16□□□□□ -0.78
VAPB-204ENST00000475243 OR13H1Q8NG92 308 aa10.16□□□□□ -0.78
VAPB-204ENST00000475243 ZNF486Q96H40 463 aaPredicted RBP10.16□□□□□ -0.78
VAPB-204ENST00000475243 NGBQ9NPG2 151 aa10.16□□□□□ -0.78
VAPB-204ENST00000475243 NOX4Q9NPH5 578 aa10.16□□□□□ -0.78
VAPB-204ENST00000475243 CNOT2Q9NZN8 540 aaKnown RBP10.16□□□□□ -0.78
VAPB-204ENST00000475243 PCDHGA5Q9Y5G8 931 aa10.16□□□□□ -0.78
VAPB-204ENST00000475243 NXPH2O95156 264 aa10.15□□□□□ -0.78
VAPB-204ENST00000475243 RPL11P62913 178 aaKnown RBP10.15□□□□□ -0.78
VAPB-204ENST00000475243 ILKQ13418 452 aa10.15□□□□□ -0.78
VAPB-204ENST00000475243 EDDM3AQ14507 147 aa10.15□□□□□ -0.78
VAPB-204ENST00000475243 PKDCCQ504Y2 493 aa10.15□□□□□ -0.78
VAPB-204ENST00000475243 HAVCR2Q8TDQ0 301 aa10.15□□□□□ -0.78
VAPB-204ENST00000475243 UTP4Q969X6 686 aaKnown RBP10.15□□□□□ -0.78
VAPB-204ENST00000475243 ZNF419Q96HQ0 510 aaPredicted RBP10.15□□□□□ -0.78
VAPB-204ENST00000475243 LCORQ96JN0 433 aaPredicted RBP10.15□□□□□ -0.78
VAPB-204ENST00000475243 FBXL2Q9UKC9 423 aa10.15□□□□□ -0.78
VAPB-204ENST00000475243 HS3ST2Q9Y278 367 aa10.15□□□□□ -0.78
VAPB-204ENST00000475243 BTAF1O14981 1849 aa10.15□□□□□ -0.78
VAPB-204ENST00000475243 TMED7-TICAM2A0A0A6YYA0 188 aa10.15□□□□□ -0.78
VAPB-204ENST00000475243 A0A0B4J2A0 478 aa10.15□□□□□ -0.78
VAPB-204ENST00000475243 IGHV3-64DA0A0J9YX35 117 aa10.15□□□□□ -0.78
VAPB-204ENST00000475243 TAPBPO15533 448 aa10.15□□□□□ -0.78
VAPB-204ENST00000475243 GABRB3P28472 473 aa10.15□□□□□ -0.78
VAPB-204ENST00000475243 PDE7AQ13946 482 aa10.15□□□□□ -0.78
VAPB-204ENST00000475243 IDO2Q6ZQW0 420 aa10.15□□□□□ -0.78
VAPB-204ENST00000475243 ZNF767PQ75MW2 155 aa10.15□□□□□ -0.78
VAPB-204ENST00000475243 SCCPDHQ8NBX0 429 aa10.15□□□□□ -0.78
VAPB-204ENST00000475243 FGGYQ96C11 551 aa10.15□□□□□ -0.78
VAPB-204ENST00000475243 TMEM59Q9BXS4 323 aa10.15□□□□□ -0.78
VAPB-204ENST00000475243 SAMD10Q9BYL1 202 aa10.15□□□□□ -0.78
VAPB-204ENST00000475243 SHPKQ9UHJ6 478 aa10.15□□□□□ -0.78
VAPB-204ENST00000475243 TMED7Q9Y3B3 224 aa10.15□□□□□ -0.78
VAPB-204ENST00000475243 I6L893 689 aaPredicted RBP10.15□□□□□ -0.78
VAPB-204ENST00000475243 NSA2O95478 260 aaKnown RBP10.15□□□□□ -0.78
VAPB-204ENST00000475243 GABRA5P31644 462 aa10.15□□□□□ -0.78
VAPB-204ENST00000475243 PARM1Q6UWI2 310 aa10.15□□□□□ -0.78
VAPB-204ENST00000475243 PM20D2Q8IYS1 436 aa10.15□□□□□ -0.78
VAPB-204ENST00000475243 TM4SF18Q96CE8 201 aa10.15□□□□□ -0.78
VAPB-204ENST00000475243 RASD2Q96D21 266 aa10.15□□□□□ -0.78
VAPB-204ENST00000475243 SLC39A13Q96H72 371 aa10.15□□□□□ -0.78
VAPB-204ENST00000475243 DCLRE1CQ96SD1 692 aaKnown RBP10.15□□□□□ -0.78
VAPB-204ENST00000475243 HIPK2Q9H2X6 1198 aa10.15□□□□□ -0.78
VAPB-204ENST00000475243 A0A1B0GVG6 124 aa10.15□□□□□ -0.78
VAPB-204ENST00000475243 ARHGAP33O14559 1287 aa10.15□□□□□ -0.78
VAPB-204ENST00000475243 SCAF4O95104 1147 aaKnown RBP10.15□□□□□ -0.78
VAPB-204ENST00000475243 TAS2R46P59540 309 aa10.15□□□□□ -0.78
VAPB-204ENST00000475243 HES1Q14469 280 aa10.15□□□□□ -0.78
VAPB-204ENST00000475243 MLF2Q15773 248 aaPredicted RBP10.15□□□□□ -0.78
VAPB-204ENST00000475243 STEAP3Q658P3 488 aa10.15□□□□□ -0.78
VAPB-204ENST00000475243 SIRT6Q8N6T7 355 aa10.15□□□□□ -0.78
VAPB-204ENST00000475243 RAB39BQ96DA2 213 aa10.15□□□□□ -0.78
VAPB-204ENST00000475243 PDLIM5Q96HC4 596 aaKnown RBP10.15□□□□□ -0.78
VAPB-204ENST00000475243 BCL7BQ9BQE9 202 aa10.15□□□□□ -0.78
VAPB-204ENST00000475243 NAA50Q9GZZ1 169 aaKnown RBP10.15□□□□□ -0.78
VAPB-204ENST00000475243 INPP5EQ9NRR6 644 aa10.15□□□□□ -0.78
VAPB-204ENST00000475243 TMEM212A6NML5 194 aa10.15□□□□□ -0.79
VAPB-204ENST00000475243 FADS1O60427 444 aa10.15□□□□□ -0.79
VAPB-204ENST00000475243 ATPAF1Q5TC12 328 aaPredicted RBP10.15□□□□□ -0.79
VAPB-204ENST00000475243 MBOAT2Q6ZWT7 520 aa10.15□□□□□ -0.79
VAPB-204ENST00000475243 PFN4Q8NHR9 129 aa10.15□□□□□ -0.79
VAPB-204ENST00000475243 ELP4Q96EB1 424 aa10.15□□□□□ -0.79
VAPB-204ENST00000475243 BSCL2Q96G97 398 aaPredicted RBP10.15□□□□□ -0.79
VAPB-204ENST00000475243 ALPLP05186 524 aa10.15□□□□□ -0.79
VAPB-204ENST00000475243 HABP2Q14520 560 aaPredicted RBP10.15□□□□□ -0.79
VAPB-204ENST00000475243 SLC10A1Q14973 349 aa10.15□□□□□ -0.79
VAPB-204ENST00000475243 OR4N2Q8NGD1 307 aa10.15□□□□□ -0.79
VAPB-204ENST00000475243 DVL3Q92997 716 aaPredicted RBP10.15□□□□□ -0.79
VAPB-204ENST00000475243 C1GALT1Q9NS00 363 aa10.15□□□□□ -0.79
VAPB-204ENST00000475243 FBXO7Q9Y3I1 522 aa10.15□□□□□ -0.79
VAPB-204ENST00000475243 CEPT1Q9Y6K0 416 aa10.15□□□□□ -0.79
VAPB-204ENST00000475243 H0YIV9 168 aa10.14□□□□□ -0.79
VAPB-204ENST00000475243 TOR1AO14656 332 aa10.14□□□□□ -0.79
VAPB-204ENST00000475243 TGM4P49221 684 aa10.14□□□□□ -0.79
VAPB-204ENST00000475243 RUNX2Q13950 521 aa10.14□□□□□ -0.79
VAPB-204ENST00000475243 TMEM217Q8N7C4 229 aa10.14□□□□□ -0.79
VAPB-204ENST00000475243 MUL1Q969V5 352 aa10.14□□□□□ -0.79
VAPB-204ENST00000475243 HRASLS5Q96KN8 279 aa10.14□□□□□ -0.79
VAPB-204ENST00000475243 ZNF582Q96NG8 517 aaPredicted RBP10.14□□□□□ -0.79
VAPB-204ENST00000475243 ANKRD19PQ9H560 264 aa10.14□□□□□ -0.79
VAPB-204ENST00000475243 METTL17Q9H7H0 456 aaPredicted RBP10.14□□□□□ -0.79
VAPB-204ENST00000475243 MARCH5Q9NX47 278 aa10.14□□□□□ -0.79
VAPB-204ENST00000475243 SCN2AQ99250 2005 aa10.14□□□□□ -0.79
VAPB-204ENST00000475243 TMEM202A6NGA9 273 aa10.14□□□□□ -0.79
VAPB-204ENST00000475243 H0Y8X5 98 aa10.14□□□□□ -0.79
VAPB-204ENST00000475243 HS3ST1O14792 307 aa10.14□□□□□ -0.79
VAPB-204ENST00000475243 PRAF2O60831 178 aa10.14□□□□□ -0.79
VAPB-204ENST00000475243 F11P03951 625 aa10.14□□□□□ -0.79
VAPB-204ENST00000475243 NFYBP25208 207 aa10.14□□□□□ -0.79
VAPB-204ENST00000475243 MMP12P39900 470 aa10.14□□□□□ -0.79
VAPB-204ENST00000475243 NPBWR1P48145 328 aa10.14□□□□□ -0.79
VAPB-204ENST00000475243 PEA15Q15121 130 aa10.14□□□□□ -0.79
VAPB-204ENST00000475243 RNLSQ5VYX0 342 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms