RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 PTGFRP43088 359 aa9.26□□□□□ -0.93
APTX-216ENST00000472896 CTSOP43234 321 aaPredicted RBP9.26□□□□□ -0.93
APTX-216ENST00000472896 METAP1P53582 386 aa9.26□□□□□ -0.93
APTX-216ENST00000472896 NRG3P56975 720 aa9.26□□□□□ -0.93
APTX-216ENST00000472896 AP1S1P61966 158 aa9.26□□□□□ -0.93
APTX-216ENST00000472896 PIN1Q13526 163 aaPredicted RBP9.26□□□□□ -0.93
APTX-216ENST00000472896 OR2F1Q13607 317 aa9.26□□□□□ -0.93
APTX-216ENST00000472896 SMCO1Q147U7 214 aa9.26□□□□□ -0.93
APTX-216ENST00000472896 PGGHGQ32M88 737 aa9.26□□□□□ -0.93
APTX-216ENST00000472896 HNRNPA1L2Q32P51 320 aaKnown RBP9.26□□□□□ -0.93
APTX-216ENST00000472896 MANEAQ5SRI9 462 aa9.26□□□□□ -0.93
APTX-216ENST00000472896 ADGRF1Q5T601 910 aa9.26□□□□□ -0.93
APTX-216ENST00000472896 MED27Q6P2C8 311 aa9.26□□□□□ -0.93
APTX-216ENST00000472896 INO80CQ6PI98 192 aaPredicted RBP9.26□□□□□ -0.93
APTX-216ENST00000472896 LINGO2Q7L985 606 aa9.26□□□□□ -0.93
APTX-216ENST00000472896 SLC36A1Q7Z2H8 476 aa9.26□□□□□ -0.93
APTX-216ENST00000472896 ADCK2Q7Z695 626 aa9.26□□□□□ -0.93
APTX-216ENST00000472896 APCDD1Q8J025 514 aa9.26□□□□□ -0.93
APTX-216ENST00000472896 KCNRGQ8N5I3 272 aa9.26□□□□□ -0.93
APTX-216ENST00000472896 RELL2Q8NC24 303 aaPredicted RBP9.26□□□□□ -0.93
APTX-216ENST00000472896 OR2AK2Q8NG84 335 aa9.26□□□□□ -0.93
APTX-216ENST00000472896 OR14C36Q8NHC7 312 aa9.26□□□□□ -0.93
APTX-216ENST00000472896 PHYHIPQ92561 330 aa9.26□□□□□ -0.93
APTX-216ENST00000472896 FCRL4Q96PJ5 515 aa9.26□□□□□ -0.93
APTX-216ENST00000472896 GPA33Q99795 319 aa9.26□□□□□ -0.93
APTX-216ENST00000472896 GINS4Q9BRT9 223 aa9.26□□□□□ -0.93
APTX-216ENST00000472896 CPEB1Q9BZB8 566 aaKnown RBP9.26□□□□□ -0.93
APTX-216ENST00000472896 MAN2C1Q9NTJ4 1040 aa9.26□□□□□ -0.93
APTX-216ENST00000472896 ACSS1Q9NUB1 689 aaPredicted RBP9.26□□□□□ -0.93
APTX-216ENST00000472896 MIOXQ9UGB7 285 aa9.26□□□□□ -0.93
APTX-216ENST00000472896 PIEZO2Q9H5I5 2752 aa9.25□□□□□ -0.93
APTX-216ENST00000472896 OR6C68A6NDL8 312 aa9.25□□□□□ -0.93
APTX-216ENST00000472896 C1orf196B1AJZ1 125 aa9.25□□□□□ -0.93
APTX-216ENST00000472896 DVL2O14641 736 aa9.25□□□□□ -0.93
APTX-216ENST00000472896 PHYHO14832 338 aa9.25□□□□□ -0.93
APTX-216ENST00000472896 EFSO43281 561 aa9.25□□□□□ -0.93
APTX-216ENST00000472896 LATO43561 262 aa9.25□□□□□ -0.93
APTX-216ENST00000472896 GATBO75879 557 aaKnown RBP9.25□□□□□ -0.93
APTX-216ENST00000472896 ZNF35P13682 527 aa9.25□□□□□ -0.93
APTX-216ENST00000472896 SNRPBP14678 240 aaKnown RBP9.25□□□□□ -0.93
APTX-216ENST00000472896 ANXA7P20073 488 aaKnown RBP9.25□□□□□ -0.93
APTX-216ENST00000472896 PTAFRP25105 342 aa9.25□□□□□ -0.93
APTX-216ENST00000472896 PGDP52209 483 aa9.25□□□□□ -0.93
APTX-216ENST00000472896 ADPRHP54922 357 aa9.25□□□□□ -0.93
APTX-216ENST00000472896 RPS13P62277 151 aaKnown RBP9.25□□□□□ -0.93
APTX-216ENST00000472896 PTSQ03393 145 aa9.25□□□□□ -0.93
APTX-216ENST00000472896 LINC00303Q3SY05 128 aa9.25□□□□□ -0.93
APTX-216ENST00000472896 ACSM3Q53FZ2 586 aa9.25□□□□□ -0.93
APTX-216ENST00000472896 FAM74A1Q5RGS3 127 aa9.25□□□□□ -0.93
APTX-216ENST00000472896 TMEM88Q6PEY1 159 aa9.25□□□□□ -0.93
APTX-216ENST00000472896 ZNF613Q6PF04 617 aa9.25□□□□□ -0.93
APTX-216ENST00000472896 ARL9Q6T311 187 aa9.25□□□□□ -0.93
APTX-216ENST00000472896 NHLRC1Q6VVB1 395 aa9.25□□□□□ -0.93
APTX-216ENST00000472896 SLC16A13Q7RTY0 426 aa9.25□□□□□ -0.93
APTX-216ENST00000472896 PRSS45Q7RTY3 260 aa9.25□□□□□ -0.93
APTX-216ENST00000472896 RBM45Q8IUH3 476 aaKnown RBP9.25□□□□□ -0.93
APTX-216ENST00000472896 CFAP206Q8IYR0 622 aa9.25□□□□□ -0.93
APTX-216ENST00000472896 GPR156Q8NFN8 814 aa9.25□□□□□ -0.93
APTX-216ENST00000472896 BBS10Q8TAM1 723 aa9.25□□□□□ -0.93
APTX-216ENST00000472896 PIGXQ8TBF5 258 aa9.25□□□□□ -0.93
APTX-216ENST00000472896 MS4A4EQ96PG1 132 aa9.25□□□□□ -0.93
APTX-216ENST00000472896 PAPOLGQ9BWT3 736 aaKnown RBP9.25□□□□□ -0.93
APTX-216ENST00000472896 DPH1Q9BZG8 443 aa9.25□□□□□ -0.93
APTX-216ENST00000472896 EGLN1Q9GZT9 426 aa9.25□□□□□ -0.93
APTX-216ENST00000472896 ATG10Q9H0Y0 220 aa9.25□□□□□ -0.93
APTX-216ENST00000472896 AUNIPQ9H7T9 357 aa9.25□□□□□ -0.93
APTX-216ENST00000472896 ISG20L2Q9H9L3 353 aaKnown RBP9.25□□□□□ -0.93
APTX-216ENST00000472896 KLHL1Q9NR64 748 aa9.25□□□□□ -0.93
APTX-216ENST00000472896 C14orf105Q9NVL8 296 aa9.25□□□□□ -0.93
APTX-216ENST00000472896 LHX3Q9UBR4 397 aa9.25□□□□□ -0.93
APTX-216ENST00000472896 PLEKHA6Q9Y2H5 1048 aa9.25□□□□□ -0.93
APTX-216ENST00000472896 SIRT4Q9Y6E7 314 aaPredicted RBP9.25□□□□□ -0.93
APTX-216ENST00000472896 TDRD6O60522 2096 aaKnown RBP9.25□□□□□ -0.93
APTX-216ENST00000472896 IGLV3-16A0A075B6K0 115 aa9.24□□□□□ -0.93
APTX-216ENST00000472896 TBC1D3DA0A087WVF3 549 aa9.24□□□□□ -0.93
APTX-216ENST00000472896 TBC1D3IA0A087WXS9 549 aa9.24□□□□□ -0.93
APTX-216ENST00000472896 TBC1D3EA0A087X179 549 aa9.24□□□□□ -0.93
APTX-216ENST00000472896 TBC1D3KA0A087X1G2 549 aa9.24□□□□□ -0.93
APTX-216ENST00000472896 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.24□□□□□ -0.93
APTX-216ENST00000472896 LY6G6EA0A0G2JKS1 128 aa9.24□□□□□ -0.93
APTX-216ENST00000472896 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.24□□□□□ -0.93
APTX-216ENST00000472896 DAPL1A0PJW8 107 aa9.24□□□□□ -0.93
APTX-216ENST00000472896 TBC1D3FA6NER0 549 aaPredicted RBP9.24□□□□□ -0.93
APTX-216ENST00000472896 EFCAB7A8K855 629 aa9.24□□□□□ -0.93
APTX-216ENST00000472896 TBC1D3LB9A6J9 549 aa9.24□□□□□ -0.93
APTX-216ENST00000472896 BCL2L11O43521 198 aa9.24□□□□□ -0.93
APTX-216ENST00000472896 CD1AP06126 327 aa9.24□□□□□ -0.93
APTX-216ENST00000472896 RAB40ALP0C0E4 278 aa9.24□□□□□ -0.93
APTX-216ENST00000472896 TBC1D3HP0C7X1 549 aa9.24□□□□□ -0.93
APTX-216ENST00000472896 ALPPL2P10696 532 aa9.24□□□□□ -0.93
APTX-216ENST00000472896 ATF1P18846 271 aa9.24□□□□□ -0.93
APTX-216ENST00000472896 FPR3P25089 353 aa9.24□□□□□ -0.93
APTX-216ENST00000472896 NOS3P29474 1203 aa9.24□□□□□ -0.93
APTX-216ENST00000472896 SLC11A2P49281 568 aa9.24□□□□□ -0.93
APTX-216ENST00000472896 HCCSP53701 268 aa9.24□□□□□ -0.93
APTX-216ENST00000472896 PPIAP62937 165 aaKnown RBP9.24□□□□□ -0.93
APTX-216ENST00000472896 UBE2IP63279 158 aaKnown RBP9.24□□□□□ -0.93
APTX-216ENST00000472896 PDZK1IP1Q13113 114 aa9.24□□□□□ -0.93
APTX-216ENST00000472896 ZNF177Q13360 481 aaPredicted RBP9.24□□□□□ -0.93
APTX-216ENST00000472896 TRAM2Q15035 370 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms