RNA–Protein interactions for RNA: ENST00000470170.1

COL11A1-208, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 785 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-208ENST00000470170 P2RY4P51582 365 aa3.34□□□□□ -1.87
COL11A1-208ENST00000470170 PRPS1P60891 318 aa3.34□□□□□ -1.87
COL11A1-208ENST00000470170 OSTNP61366 133 aa3.34□□□□□ -1.87
COL11A1-208ENST00000470170 STX5Q13190 355 aa3.34□□□□□ -1.87
COL11A1-208ENST00000470170 ART3Q13508 389 aa3.34□□□□□ -1.87
COL11A1-208ENST00000470170 EXOSC2Q13868 293 aaKnown RBP3.34□□□□□ -1.87
COL11A1-208ENST00000470170 HEPACAMQ14CZ8 416 aa3.34□□□□□ -1.87
COL11A1-208ENST00000470170 PTPN20Q4JDL3 420 aa3.34□□□□□ -1.87
COL11A1-208ENST00000470170 DNAL1Q4LDG9 190 aa3.34□□□□□ -1.87
COL11A1-208ENST00000470170 CT45A2Q5DJT8 189 aa3.34□□□□□ -1.87
COL11A1-208ENST00000470170 TMEM31Q5JXX7 168 aa3.34□□□□□ -1.87
COL11A1-208ENST00000470170 C6orf183Q5T699 404 aa3.34□□□□□ -1.87
COL11A1-208ENST00000470170 C1orf189Q5VU69 101 aa3.34□□□□□ -1.87
COL11A1-208ENST00000470170 ZNF470Q6ECI4 717 aa3.34□□□□□ -1.87
COL11A1-208ENST00000470170 FAM71F2Q6NXP2 309 aa3.34□□□□□ -1.87
COL11A1-208ENST00000470170 PPP1R2P3Q6NXS1 205 aa3.34□□□□□ -1.87
COL11A1-208ENST00000470170 APOOLQ6UXV4 268 aa3.34□□□□□ -1.87
COL11A1-208ENST00000470170 PLEKHG7Q6ZR37 379 aa3.34□□□□□ -1.87
COL11A1-208ENST00000470170 H2BFWTQ7Z2G1 175 aa3.34□□□□□ -1.87
COL11A1-208ENST00000470170 GOLGA7Q7Z5G4 137 aa3.34□□□□□ -1.87
COL11A1-208ENST00000470170 ENTHD1Q8IYW4 607 aa3.34□□□□□ -1.87
COL11A1-208ENST00000470170 SELENOHQ8IZQ5 122 aaKnown RBP3.34□□□□□ -1.87
COL11A1-208ENST00000470170 FAM86B1Q8N7N1 296 aa3.34□□□□□ -1.87
COL11A1-208ENST00000470170 RELL2Q8NC24 303 aaPredicted RBP3.34□□□□□ -1.87
COL11A1-208ENST00000470170 OR7G2Q8NG99 324 aa3.34□□□□□ -1.87
COL11A1-208ENST00000470170 OR5AU1Q8NGC0 362 aa3.34□□□□□ -1.87
COL11A1-208ENST00000470170 OR8J2Q8NGG1 315 aa3.34□□□□□ -1.87
COL11A1-208ENST00000470170 OR51L1Q8NGJ5 315 aa3.34□□□□□ -1.87
COL11A1-208ENST00000470170 OR6M1Q8NGM8 313 aa3.34□□□□□ -1.87
COL11A1-208ENST00000470170 FBXO25Q8TCJ0 367 aa3.34□□□□□ -1.87
COL11A1-208ENST00000470170 MARCH1Q8TCQ1 289 aa3.34□□□□□ -1.87
COL11A1-208ENST00000470170 ING5Q8WYH8 240 aa3.34□□□□□ -1.87
COL11A1-208ENST00000470170 PPP1R14BQ96C90 147 aa3.34□□□□□ -1.87
COL11A1-208ENST00000470170 OPTNQ96CV9 577 aa3.34□□□□□ -1.87
COL11A1-208ENST00000470170 SH3YL1Q96HL8 342 aaPredicted RBP3.34□□□□□ -1.87
COL11A1-208ENST00000470170 IMMP1LQ96LU5 166 aa3.34□□□□□ -1.87
COL11A1-208ENST00000470170 ZNF578Q96N58 590 aaPredicted RBP3.34□□□□□ -1.87
COL11A1-208ENST00000470170 RIT2Q99578 217 aa3.34□□□□□ -1.87
COL11A1-208ENST00000470170 KIR2DL4Q99706 377 aa3.34□□□□□ -1.87
COL11A1-208ENST00000470170 NAPGQ99747 312 aaPredicted RBP3.34□□□□□ -1.87
COL11A1-208ENST00000470170 MED10Q9BTT4 135 aa3.34□□□□□ -1.87
COL11A1-208ENST00000470170 NDUFAF3Q9BU61 184 aa3.34□□□□□ -1.87
COL11A1-208ENST00000470170 CHID1Q9BWS9 393 aa3.34□□□□□ -1.87
COL11A1-208ENST00000470170 UPF3BQ9BZI7 483 aaKnown RBP3.34□□□□□ -1.87
COL11A1-208ENST00000470170 NARFLQ9H6Q4 476 aa3.34□□□□□ -1.87
COL11A1-208ENST00000470170 METTL8Q9H825 291 aaKnown RBP3.34□□□□□ -1.87
COL11A1-208ENST00000470170 SLC38A10Q9HBR0 1119 aa3.34□□□□□ -1.87
COL11A1-208ENST00000470170 MRM3Q9HC36 420 aaKnown RBP3.34□□□□□ -1.87
COL11A1-208ENST00000470170 ADAP2Q9NPF8 381 aa3.34□□□□□ -1.87
COL11A1-208ENST00000470170 GDF3Q9NR23 364 aa3.34□□□□□ -1.87
COL11A1-208ENST00000470170 TECRQ9NZ01 308 aaKnown RBP3.34□□□□□ -1.87
COL11A1-208ENST00000470170 CFL2Q9Y281 166 aa3.34□□□□□ -1.87
COL11A1-208ENST00000470170 INSRP06213 1382 aa3.34□□□□□ -1.88
COL11A1-208ENST00000470170 TNRQ92752 1358 aa3.34□□□□□ -1.88
COL11A1-208ENST00000470170 PINLYPA6NC86 204 aa3.33□□□□□ -1.88
COL11A1-208ENST00000470170 SMIM23A6NLE4 172 aa3.33□□□□□ -1.88
COL11A1-208ENST00000470170 NDUFAB1O14561 156 aa3.33□□□□□ -1.88
COL11A1-208ENST00000470170 SCAMP2O15127 329 aaKnown RBP3.33□□□□□ -1.88
COL11A1-208ENST00000470170 RAD51BO15315 384 aa3.33□□□□□ -1.88
COL11A1-208ENST00000470170 EIF3HO15372 352 aaKnown RBP eCLIP3.33□□□□□ -1.88
COL11A1-208ENST00000470170 RS1O15537 224 aa3.33□□□□□ -1.88
COL11A1-208ENST00000470170 COCHO43405 550 aa3.33□□□□□ -1.88
COL11A1-208ENST00000470170 ERLIN2O94905 339 aa3.33□□□□□ -1.88
COL11A1-208ENST00000470170 IGLV1-47P01700 117 aa3.33□□□□□ -1.88
COL11A1-208ENST00000470170 UQCRBP14927 111 aa3.33□□□□□ -1.88
COL11A1-208ENST00000470170 MMP11P24347 488 aa3.33□□□□□ -1.88
COL11A1-208ENST00000470170 PSMB6P28072 239 aa3.33□□□□□ -1.88
COL11A1-208ENST00000470170 CRYBB2P43320 205 aa3.33□□□□□ -1.88
COL11A1-208ENST00000470170 UQCRFS1P47985 274 aa3.33□□□□□ -1.88
COL11A1-208ENST00000470170 CDC34P49427 236 aaPredicted RBP3.33□□□□□ -1.88
COL11A1-208ENST00000470170 ACLYP53396 1101 aa3.33□□□□□ -1.88
COL11A1-208ENST00000470170 CEBPGP53567 150 aa3.33□□□□□ -1.88
COL11A1-208ENST00000470170 PSMD4P55036 377 aaKnown RBP3.33□□□□□ -1.88
COL11A1-208ENST00000470170 RAB14P61106 215 aa3.33□□□□□ -1.88
COL11A1-208ENST00000470170 POLR2GP62487 172 aaKnown RBP eCLIP3.33□□□□□ -1.88
COL11A1-208ENST00000470170 HERVK_113P63132 956 aa3.33□□□□□ -1.88
COL11A1-208ENST00000470170 ERVK-8P63133 956 aa3.33□□□□□ -1.88
COL11A1-208ENST00000470170 MRPS25P82663 173 aaKnown RBP3.33□□□□□ -1.88
COL11A1-208ENST00000470170 CDK16Q00536 496 aa3.33□□□□□ -1.88
COL11A1-208ENST00000470170 GABPAQ06546 454 aa3.33□□□□□ -1.88
COL11A1-208ENST00000470170 CD47Q08722 323 aa3.33□□□□□ -1.88
COL11A1-208ENST00000470170 PMS2P3Q13401 168 aa3.33□□□□□ -1.88
COL11A1-208ENST00000470170 EXOSC7Q15024 291 aaKnown RBP3.33□□□□□ -1.88
COL11A1-208ENST00000470170 PSG3Q16557 428 aa3.33□□□□□ -1.88
COL11A1-208ENST00000470170 SYPL1Q16563 259 aa3.33□□□□□ -1.88
COL11A1-208ENST00000470170 C18orf21Q32NC0 220 aaPredicted RBP3.33□□□□□ -1.88
COL11A1-208ENST00000470170 GLYR1Q49A26 553 aaPredicted RBP3.33□□□□□ -1.88
COL11A1-208ENST00000470170 SEL1L2Q5TEA6 688 aa3.33□□□□□ -1.88
COL11A1-208ENST00000470170 ZNF658Q5TYW1 1059 aaPredicted RBP3.33□□□□□ -1.88
COL11A1-208ENST00000470170 LIPNQ5VXI9 398 aa3.33□□□□□ -1.88
COL11A1-208ENST00000470170 OR4F3Q6IEY1 312 aa3.33□□□□□ -1.88
COL11A1-208ENST00000470170 TMIGD1Q6UXZ0 262 aa3.33□□□□□ -1.88
COL11A1-208ENST00000470170 UTS2BQ765I0 119 aa3.33□□□□□ -1.88
COL11A1-208ENST00000470170 SLC35D2Q76EJ3 337 aa3.33□□□□□ -1.88
COL11A1-208ENST00000470170 SLC26A11Q86WA9 606 aa3.33□□□□□ -1.88
COL11A1-208ENST00000470170 SERPINA9Q86WD7 417 aa3.33□□□□□ -1.88
COL11A1-208ENST00000470170 MLKLQ8NB16 471 aa3.33□□□□□ -1.88
COL11A1-208ENST00000470170 CAPSLQ8WWF8 208 aa3.33□□□□□ -1.88
COL11A1-208ENST00000470170 NRGNQ92686 78 aa3.33□□□□□ -1.88
COL11A1-208ENST00000470170 ELSPBP1Q96BH3 223 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms