RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 RNF7Q9UBF6 113 aa4.75□□□□□ -1.65
PTCD3-207ENST00000467273 MGAT4CQ9UBM8 478 aa4.75□□□□□ -1.65
PTCD3-207ENST00000467273 ASIC3Q9UHC3 531 aa4.75□□□□□ -1.65
PTCD3-207ENST00000467273 FBXL2Q9UKC9 423 aa4.75□□□□□ -1.65
PTCD3-207ENST00000467273 RAB21Q9UL25 225 aa4.75□□□□□ -1.65
PTCD3-207ENST00000467273 MCTS1Q9ULC4 181 aaKnown RBP4.75□□□□□ -1.65
PTCD3-207ENST00000467273 ZNF490Q9ULM2 529 aaPredicted RBP4.75□□□□□ -1.65
PTCD3-207ENST00000467273 STK38LQ9Y2H1 464 aa4.75□□□□□ -1.65
PTCD3-207ENST00000467273 OARD1Q9Y530 152 aa4.75□□□□□ -1.65
PTCD3-207ENST00000467273 COMMD3-BMI1R4GMX3 469 aa4.75□□□□□ -1.65
PTCD3-207ENST00000467273 PLCE1Q9P212 2302 aa4.75□□□□□ -1.65
PTCD3-207ENST00000467273 CADP27708 2225 aa4.74□□□□□ -1.65
PTCD3-207ENST00000467273 PRKDCP78527 4128 aaKnown RBP4.74□□□□□ -1.65
PTCD3-207ENST00000467273 WNK1Q9H4A3 2382 aa4.74□□□□□ -1.65
PTCD3-207ENST00000467273 IGHV4-61A0A0C4DH41 118 aa4.74□□□□□ -1.65
PTCD3-207ENST00000467273 OR2M5A3KFT3 312 aa4.74□□□□□ -1.65
PTCD3-207ENST00000467273 SDR42E2A6NKP2 422 aa4.74□□□□□ -1.65
PTCD3-207ENST00000467273 STX16O14662 325 aa4.74□□□□□ -1.65
PTCD3-207ENST00000467273 ABCD4O14678 606 aa4.74□□□□□ -1.65
PTCD3-207ENST00000467273 SEC14L5O43304 696 aa4.74□□□□□ -1.65
PTCD3-207ENST00000467273 GMFGO60234 142 aa4.74□□□□□ -1.65
PTCD3-207ENST00000467273 RAMP1O60894 148 aa4.74□□□□□ -1.65
PTCD3-207ENST00000467273 NXPH3O95157 252 aa4.74□□□□□ -1.65
PTCD3-207ENST00000467273 DIRAS3O95661 229 aa4.74□□□□□ -1.65
PTCD3-207ENST00000467273 MBD3O95983 291 aa4.74□□□□□ -1.65
PTCD3-207ENST00000467273 TACSTD2P09758 323 aa4.74□□□□□ -1.65
PTCD3-207ENST00000467273 UBL4AP11441 157 aa4.74□□□□□ -1.65
PTCD3-207ENST00000467273 CPT2P23786 658 aa4.74□□□□□ -1.65
PTCD3-207ENST00000467273 PIK3R1P27986 724 aa4.74□□□□□ -1.65
PTCD3-207ENST00000467273 MAGEA6P43360 314 aa4.74□□□□□ -1.65
PTCD3-207ENST00000467273 FABP6P51161 128 aa4.74□□□□□ -1.65
PTCD3-207ENST00000467273 SUCLG1P53597 346 aaKnown RBP4.74□□□□□ -1.65
PTCD3-207ENST00000467273 GAS1P54826 345 aa4.74□□□□□ -1.65
PTCD3-207ENST00000467273 CDKN2DP55273 166 aa4.74□□□□□ -1.65
PTCD3-207ENST00000467273 CLDN20P56880 219 aa4.74□□□□□ -1.65
PTCD3-207ENST00000467273 SUMO2P61956 95 aaKnown RBP4.74□□□□□ -1.65
PTCD3-207ENST00000467273 CSNK2BP67870 215 aa4.74□□□□□ -1.65
PTCD3-207ENST00000467273 PSG6Q00889 435 aa4.74□□□□□ -1.65
PTCD3-207ENST00000467273 DR1Q01658 176 aa4.74□□□□□ -1.65
PTCD3-207ENST00000467273 SCN1BQ07699 218 aa4.74□□□□□ -1.65
PTCD3-207ENST00000467273 ITGADQ13349 1161 aa4.74□□□□□ -1.65
PTCD3-207ENST00000467273 DCTN2Q13561 401 aaKnown RBP4.74□□□□□ -1.65
PTCD3-207ENST00000467273 C9orf152Q5JTZ5 239 aa4.74□□□□□ -1.65
PTCD3-207ENST00000467273 TIMM23BQ5SRD1 257 aa4.74□□□□□ -1.65
PTCD3-207ENST00000467273 FAM69AQ5T7M9 428 aa4.74□□□□□ -1.65
PTCD3-207ENST00000467273 KHDRBS2Q5VWX1 349 aaKnown RBP4.74□□□□□ -1.65
PTCD3-207ENST00000467273 DGAT2L7PQ6IED9 249 aa4.74□□□□□ -1.65
PTCD3-207ENST00000467273 OR52E8Q6IFG1 317 aa4.74□□□□□ -1.65
PTCD3-207ENST00000467273 ETFRF1Q6IPR1 90 aa4.74□□□□□ -1.65
PTCD3-207ENST00000467273 Q6ZNX1 250 aa4.74□□□□□ -1.65
PTCD3-207ENST00000467273 Q6ZSR9 355 aa4.74□□□□□ -1.65
PTCD3-207ENST00000467273 Q6ZWC4 215 aa4.74□□□□□ -1.65
PTCD3-207ENST00000467273 PEX26Q7Z412 305 aa4.74□□□□□ -1.65
PTCD3-207ENST00000467273 ADAMTSL2Q86TH1 951 aa4.74□□□□□ -1.65
PTCD3-207ENST00000467273 LAS2Q8IYD9 372 aa4.74□□□□□ -1.65
PTCD3-207ENST00000467273 PRR22Q8IZ63 422 aa4.74□□□□□ -1.65
PTCD3-207ENST00000467273 SYCE1Q8N0S2 351 aa4.74□□□□□ -1.65
PTCD3-207ENST00000467273 LRRC57Q8N9N7 239 aa4.74□□□□□ -1.65
PTCD3-207ENST00000467273 MCUQ8NE86 351 aa4.74□□□□□ -1.65
PTCD3-207ENST00000467273 OR52B6Q8NGF0 335 aa4.74□□□□□ -1.65
PTCD3-207ENST00000467273 HUS1BQ8NHY5 278 aa4.74□□□□□ -1.65
PTCD3-207ENST00000467273 METTL6Q8TCB7 284 aa4.74□□□□□ -1.65
PTCD3-207ENST00000467273 ZNF473Q8WTR7 871 aaKnown RBP4.74□□□□□ -1.65
PTCD3-207ENST00000467273 MRPL24Q96A35 216 aaKnown RBP4.74□□□□□ -1.65
PTCD3-207ENST00000467273 TMIGD2Q96BF3 282 aa4.74□□□□□ -1.65
PTCD3-207ENST00000467273 APOPT1Q96IL0 206 aa4.74□□□□□ -1.65
PTCD3-207ENST00000467273 EGFL8Q99944 293 aa4.74□□□□□ -1.65
PTCD3-207ENST00000467273 SLC5A7Q9GZV3 580 aa4.74□□□□□ -1.65
PTCD3-207ENST00000467273 KCNK9Q9NPC2 374 aa4.74□□□□□ -1.65
PTCD3-207ENST00000467273 C20orf96Q9NUD7 363 aaPredicted RBP4.74□□□□□ -1.65
PTCD3-207ENST00000467273 MED29Q9NX70 200 aa4.74□□□□□ -1.65
PTCD3-207ENST00000467273 IFNKQ9P0W0 207 aa4.74□□□□□ -1.65
PTCD3-207ENST00000467273 PRODH2Q9UF12 536 aa4.74□□□□□ -1.65
PTCD3-207ENST00000467273 HSF4Q9ULV5 492 aa4.74□□□□□ -1.65
PTCD3-207ENST00000467273 RCE1Q9Y256 329 aa4.74□□□□□ -1.65
PTCD3-207ENST00000467273 ZNF337Q9Y3M9 751 aa4.74□□□□□ -1.65
PTCD3-207ENST00000467273 PRR14LQ5THK1 2151 aa4.74□□□□□ -1.65
PTCD3-207ENST00000467273 ALPK2Q86TB3 2170 aa4.74□□□□□ -1.65
PTCD3-207ENST00000467273 AGAP5A6NIR3 686 aa4.73□□□□□ -1.65
PTCD3-207ENST00000467273 ZSCAN5BA6NJL1 495 aa4.73□□□□□ -1.65
PTCD3-207ENST00000467273 HSBP1L1C9JCN9 74 aa4.73□□□□□ -1.65
PTCD3-207ENST00000467273 E7EQL1 145 aa4.73□□□□□ -1.65
PTCD3-207ENST00000467273 GOLGA6L19H0YKK7 550 aa4.73□□□□□ -1.65
PTCD3-207ENST00000467273 ADAMDEC1O15204 470 aa4.73□□□□□ -1.65
PTCD3-207ENST00000467273 SYNGR4O95473 234 aa4.73□□□□□ -1.65
PTCD3-207ENST00000467273 ATP1B1P05026 303 aa4.73□□□□□ -1.65
PTCD3-207ENST00000467273 NCF1P14598 390 aaPredicted RBP4.73□□□□□ -1.65
PTCD3-207ENST00000467273 ETS1P14921 441 aa4.73□□□□□ -1.65
PTCD3-207ENST00000467273 ZNF17P17021 662 aa4.73□□□□□ -1.65
PTCD3-207ENST00000467273 S1PR1P21453 382 aa4.73□□□□□ -1.65
PTCD3-207ENST00000467273 PTBP1P26599 531 aaKnown RBP eCLIP4.73□□□□□ -1.65
PTCD3-207ENST00000467273 GIFP27352 417 aa4.73□□□□□ -1.65
PTCD3-207ENST00000467273 MDH1P40925 334 aaKnown RBP4.73□□□□□ -1.65
PTCD3-207ENST00000467273 PAFAH1B1P43034 410 aa4.73□□□□□ -1.65
PTCD3-207ENST00000467273 KHKP50053 298 aa4.73□□□□□ -1.65
PTCD3-207ENST00000467273 BMXP51813 675 aa4.73□□□□□ -1.65
PTCD3-207ENST00000467273 RAP1GDS1P52306 607 aa4.73□□□□□ -1.65
PTCD3-207ENST00000467273 PNLIPRP2P54317 469 aa4.73□□□□□ -1.65
PTCD3-207ENST00000467273 CDH15P55291 814 aa4.73□□□□□ -1.65
PTCD3-207ENST00000467273 RPL15P61313 204 aaKnown RBP4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms