RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 QARSP47897 775 aaKnown RBP2.29□□□□□ -2.04
SMC4-207ENST00000467263 PPT1P50897 306 aa2.29□□□□□ -2.04
SMC4-207ENST00000467263 CBX1P83916 185 aa2.29□□□□□ -2.04
SMC4-207ENST00000467263 SPIBQ01892 262 aa2.29□□□□□ -2.04
SMC4-207ENST00000467263 TNFRSF17Q02223 184 aa2.29□□□□□ -2.04
SMC4-207ENST00000467263 PLD1Q13393 1074 aa2.29□□□□□ -2.04
SMC4-207ENST00000467263 SGCAQ16586 387 aa2.29□□□□□ -2.04
SMC4-207ENST00000467263 PDK4Q16654 411 aa2.29□□□□□ -2.04
SMC4-207ENST00000467263 LY6G6FQ5SQ64 297 aa2.29□□□□□ -2.04
SMC4-207ENST00000467263 ZSCAN25Q6NSZ9 544 aa2.29□□□□□ -2.04
SMC4-207ENST00000467263 Q6ZR03 302 aa2.29□□□□□ -2.04
SMC4-207ENST00000467263 ANKFN1Q8N957 763 aa2.29□□□□□ -2.04
SMC4-207ENST00000467263 IPMKQ8NFU5 416 aa2.29□□□□□ -2.04
SMC4-207ENST00000467263 OR52H1Q8NGJ2 320 aa2.29□□□□□ -2.04
SMC4-207ENST00000467263 OR2G3Q8NGZ4 309 aa2.29□□□□□ -2.04
SMC4-207ENST00000467263 ZFP90Q8TF47 636 aa2.29□□□□□ -2.04
SMC4-207ENST00000467263 BMFQ96LC9 184 aa2.29□□□□□ -2.04
SMC4-207ENST00000467263 NHEJ1Q9H9Q4 299 aaPredicted RBP2.29□□□□□ -2.04
SMC4-207ENST00000467263 INPP5EQ9NRR6 644 aa2.29□□□□□ -2.04
SMC4-207ENST00000467263 GLRX2Q9NS18 164 aa2.29□□□□□ -2.04
SMC4-207ENST00000467263 PIPOXQ9P0Z9 390 aa2.29□□□□□ -2.04
SMC4-207ENST00000467263 POLDIP2Q9Y2S7 368 aa2.29□□□□□ -2.04
SMC4-207ENST00000467263 HIVEP2P31629 2446 aa2.29□□□□□ -2.04
SMC4-207ENST00000467263 NUP214P35658 2090 aaPredicted RBP2.29□□□□□ -2.04
SMC4-207ENST00000467263 CABIN1Q9Y6J0 2220 aa2.28□□□□□ -2.04
SMC4-207ENST00000467263 PLAC8L1A1L4L8 177 aa2.28□□□□□ -2.04
SMC4-207ENST00000467263 METTL21EPA6NDL7 271 aa2.28□□□□□ -2.04
SMC4-207ENST00000467263 ENTPD5O75356 428 aa2.28□□□□□ -2.04
SMC4-207ENST00000467263 IDH1O75874 414 aaKnown RBP2.28□□□□□ -2.04
SMC4-207ENST00000467263 CTDNEP1O95476 244 aa2.28□□□□□ -2.04
SMC4-207ENST00000467263 CD5P06127 495 aa2.28□□□□□ -2.04
SMC4-207ENST00000467263 UGT2B4P06133 528 aa2.28□□□□□ -2.04
SMC4-207ENST00000467263 RPA2P15927 270 aa2.28□□□□□ -2.04
SMC4-207ENST00000467263 GNA11P29992 359 aa2.28□□□□□ -2.04
SMC4-207ENST00000467263 FGF8P55075 233 aaPredicted RBP2.28□□□□□ -2.04
SMC4-207ENST00000467263 POLR2FP61218 127 aaKnown RBP2.28□□□□□ -2.04
SMC4-207ENST00000467263 ENPEPQ07075 957 aa2.28□□□□□ -2.04
SMC4-207ENST00000467263 FZD2Q14332 565 aa2.28□□□□□ -2.04
SMC4-207ENST00000467263 NADK2Q4G0N4 442 aa2.28□□□□□ -2.04
SMC4-207ENST00000467263 ABCA11PQ4W5N1 156 aa2.28□□□□□ -2.04
SMC4-207ENST00000467263 C1orf220Q5T0J3 134 aa2.28□□□□□ -2.04
SMC4-207ENST00000467263 ZNF683Q8IZ20 524 aa2.28□□□□□ -2.04
SMC4-207ENST00000467263 RNF182Q8N6D2 247 aa2.28□□□□□ -2.04
SMC4-207ENST00000467263 FAM86B1Q8N7N1 296 aa2.28□□□□□ -2.04
SMC4-207ENST00000467263 ZNF709Q8N972 641 aa2.28□□□□□ -2.04
SMC4-207ENST00000467263 FNDC5Q8NAU1 212 aa2.28□□□□□ -2.04
SMC4-207ENST00000467263 OR1N2Q8NGR9 330 aa2.28□□□□□ -2.04
SMC4-207ENST00000467263 UBALD1Q8TB05 177 aa2.28□□□□□ -2.04
SMC4-207ENST00000467263 FRZBQ92765 325 aa2.28□□□□□ -2.04
SMC4-207ENST00000467263 NPAS2Q99743 824 aa2.28□□□□□ -2.04
SMC4-207ENST00000467263 LIN28AQ9H9Z2 209 aaKnown RBP2.28□□□□□ -2.04
SMC4-207ENST00000467263 SLC35D1Q9NTN3 355 aa2.28□□□□□ -2.04
SMC4-207ENST00000467263 UFSP2Q9NUQ7 469 aa2.28□□□□□ -2.04
SMC4-207ENST00000467263 GIN1Q9NXP7 522 aa2.28□□□□□ -2.04
SMC4-207ENST00000467263 OPN4Q9UHM6 478 aa2.28□□□□□ -2.04
SMC4-207ENST00000467263 TMCO1Q9UM00 188 aa2.28□□□□□ -2.04
SMC4-207ENST00000467263 YTHDF2Q9Y5A9 579 aaKnown RBP2.28□□□□□ -2.04
SMC4-207ENST00000467263 PRSS37A4D1T9 235 aa2.27□□□□□ -2.05
SMC4-207ENST00000467263 MED7O43513 233 aa2.27□□□□□ -2.05
SMC4-207ENST00000467263 TBX19O60806 448 aa2.27□□□□□ -2.05
SMC4-207ENST00000467263 CSF3P09919 207 aa2.27□□□□□ -2.05
SMC4-207ENST00000467263 RHOXF2BP0C7M4 288 aa2.27□□□□□ -2.05
SMC4-207ENST00000467263 HSMCR30P0CW71 290 aa2.27□□□□□ -2.05
SMC4-207ENST00000467263 ZNF30P17039 623 aa2.27□□□□□ -2.05
SMC4-207ENST00000467263 IL12AP29459 219 aa2.27□□□□□ -2.05
SMC4-207ENST00000467263 RPL13AP40429 203 aaKnown RBP2.27□□□□□ -2.05
SMC4-207ENST00000467263 HMGCS1Q01581 520 aa2.27□□□□□ -2.05
SMC4-207ENST00000467263 KLRB1Q12918 225 aa2.27□□□□□ -2.05
SMC4-207ENST00000467263 GANABQ14697 944 aaKnown RBP2.27□□□□□ -2.05
SMC4-207ENST00000467263 GNMTQ14749 295 aa2.27□□□□□ -2.05
SMC4-207ENST00000467263 C5orf47Q569G3 176 aa2.27□□□□□ -2.05
SMC4-207ENST00000467263 TMEM225Q6GV28 225 aa2.27□□□□□ -2.05
SMC4-207ENST00000467263 IGFL1Q6UW32 110 aa2.27□□□□□ -2.05
SMC4-207ENST00000467263 LYPD2Q6UXB3 125 aa2.27□□□□□ -2.05
SMC4-207ENST00000467263 ZNF615Q8N8J6 731 aa2.27□□□□□ -2.05
SMC4-207ENST00000467263 OR2T34Q8NGX1 318 aa2.27□□□□□ -2.05
SMC4-207ENST00000467263 TRMT10AQ8TBZ6 339 aaKnown RBP2.27□□□□□ -2.05
SMC4-207ENST00000467263 ACTRT1Q8TDG2 376 aa2.27□□□□□ -2.05
SMC4-207ENST00000467263 DEDD2Q8WXF8 326 aa2.27□□□□□ -2.05
SMC4-207ENST00000467263 UBE2E3Q969T4 207 aa2.27□□□□□ -2.05
SMC4-207ENST00000467263 EXOSC8Q96B26 276 aaKnown RBP2.27□□□□□ -2.05
SMC4-207ENST00000467263 DTNBP1Q96EV8 351 aa2.27□□□□□ -2.05
SMC4-207ENST00000467263 SENP8Q96LD8 212 aa2.27□□□□□ -2.05
SMC4-207ENST00000467263 CLCC1Q96S66 551 aa2.27□□□□□ -2.05
SMC4-207ENST00000467263 ECSITQ9BQ95 431 aa2.27□□□□□ -2.05
SMC4-207ENST00000467263 GBA3Q9H227 469 aa2.27□□□□□ -2.05
SMC4-207ENST00000467263 RANBP3Q9H6Z4 567 aaPredicted RBP2.27□□□□□ -2.05
SMC4-207ENST00000467263 SLC40A1Q9NP59 571 aa2.27□□□□□ -2.05
SMC4-207ENST00000467263 HPF1Q9NWY4 346 aa2.27□□□□□ -2.05
SMC4-207ENST00000467263 CALYQ9NYX4 217 aa2.27□□□□□ -2.05
SMC4-207ENST00000467263 TMOD2Q9NZR1 351 aa2.27□□□□□ -2.05
SMC4-207ENST00000467263 MRPS33Q9Y291 106 aaKnown RBP2.27□□□□□ -2.05
SMC4-207ENST00000467263 F11RQ9Y624 299 aaKnown RBP2.27□□□□□ -2.05
SMC4-207ENST00000467263 NFASCO94856 1347 aa2.26□□□□□ -2.05
SMC4-207ENST00000467263 MBLAC1A4D2B0 266 aaPredicted RBP2.26□□□□□ -2.05
SMC4-207ENST00000467263 HSD17B6O14756 317 aa2.26□□□□□ -2.05
SMC4-207ENST00000467263 TLX1NBP0CAT3 122 aa2.26□□□□□ -2.05
SMC4-207ENST00000467263 GKN3PP0CG01 181 aa2.26□□□□□ -2.05
SMC4-207ENST00000467263 OR5I1Q13606 314 aa2.26□□□□□ -2.05
SMC4-207ENST00000467263 DPYSL2Q16555 572 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms