RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 ST6GALNAC5Q9BVH7 336 aa2.36□□□□□ -2.03
XRN1-206ENST00000467077 SLC17A9Q9BYT1 436 aa2.36□□□□□ -2.03
XRN1-206ENST00000467077 ULBP1Q9BZM6 244 aa2.36□□□□□ -2.03
XRN1-206ENST00000467077 SIRPDQ9H106 197 aa2.36□□□□□ -2.03
XRN1-206ENST00000467077 TNMDQ9H2S6 317 aa2.36□□□□□ -2.03
XRN1-206ENST00000467077 TCEAL2Q9H3H9 227 aaPredicted RBP2.36□□□□□ -2.03
XRN1-206ENST00000467077 Q9HAA7 133 aa2.36□□□□□ -2.03
XRN1-206ENST00000467077 RDH14Q9HBH5 336 aa2.36□□□□□ -2.03
XRN1-206ENST00000467077 AGPAT3Q9NRZ7 376 aa2.36□□□□□ -2.03
XRN1-206ENST00000467077 HOMER3Q9NSC5 361 aa2.36□□□□□ -2.03
XRN1-206ENST00000467077 SLC39A1Q9NY26 324 aa2.36□□□□□ -2.03
XRN1-206ENST00000467077 KLHDC2Q9Y2U9 406 aa2.36□□□□□ -2.03
XRN1-206ENST00000467077 USP9YO00507 2555 aaPredicted RBP2.36□□□□□ -2.03
XRN1-206ENST00000467077 DOPEY1Q5JWR5 2465 aa2.35□□□□□ -2.03
XRN1-206ENST00000467077 SPTA1P02549 2419 aa2.35□□□□□ -2.03
XRN1-206ENST00000467077 IGHV3OR16-12A0A075B7B8 117 aa2.35□□□□□ -2.03
XRN1-206ENST00000467077 A0A0A6YYD4 124 aa2.35□□□□□ -2.03
XRN1-206ENST00000467077 IGHV5-10-1A0A0J9YXX1 117 aa2.35□□□□□ -2.03
XRN1-206ENST00000467077 CFAP73A6NFT4 308 aa2.35□□□□□ -2.03
XRN1-206ENST00000467077 ARHGAP42A6NI28 874 aa2.35□□□□□ -2.03
XRN1-206ENST00000467077 CCT8L1PA6NM43 557 aa2.35□□□□□ -2.03
XRN1-206ENST00000467077 F5H5T6 163 aa2.35□□□□□ -2.03
XRN1-206ENST00000467077 K7ERQ8 282 aa2.35□□□□□ -2.03
XRN1-206ENST00000467077 XPO1O14980 1071 aaKnown RBP2.35□□□□□ -2.03
XRN1-206ENST00000467077 ARPC1BO15143 372 aaKnown RBP2.35□□□□□ -2.03
XRN1-206ENST00000467077 ZW10O43264 779 aa2.35□□□□□ -2.03
XRN1-206ENST00000467077 SEC22BO75396 215 aa2.35□□□□□ -2.03
XRN1-206ENST00000467077 ASS1P00966 412 aaKnown RBP2.35□□□□□ -2.03
XRN1-206ENST00000467077 HLA-DRAP01903 254 aa2.35□□□□□ -2.03
XRN1-206ENST00000467077 APOEP02649 317 aa2.35□□□□□ -2.03
XRN1-206ENST00000467077 ZCCHC18P0CG32 403 aa2.35□□□□□ -2.03
XRN1-206ENST00000467077 ADRB3P13945 408 aa2.35□□□□□ -2.03
XRN1-206ENST00000467077 ETS1P14921 441 aa2.35□□□□□ -2.03
XRN1-206ENST00000467077 TCN2P20062 427 aa2.35□□□□□ -2.03
XRN1-206ENST00000467077 NPY2RP49146 381 aa2.35□□□□□ -2.03
XRN1-206ENST00000467077 MFAP2P55001 183 aa2.35□□□□□ -2.03
XRN1-206ENST00000467077 DAOAP59103 153 aa2.35□□□□□ -2.03
XRN1-206ENST00000467077 PFN3P60673 137 aa2.35□□□□□ -2.03
XRN1-206ENST00000467077 SNRPFP62306 86 aaKnown RBP2.35□□□□□ -2.03
XRN1-206ENST00000467077 INCA1Q0VD86 236 aa2.35□□□□□ -2.03
XRN1-206ENST00000467077 BST2Q10589 180 aaKnown RBP2.35□□□□□ -2.03
XRN1-206ENST00000467077 KIAA0040Q15053 153 aa2.35□□□□□ -2.03
XRN1-206ENST00000467077 HAGHQ16775 308 aa2.35□□□□□ -2.03
XRN1-206ENST00000467077 GOLGA7BQ2TAP0 167 aa2.35□□□□□ -2.03
XRN1-206ENST00000467077 HKDC1Q2TB90 917 aa2.35□□□□□ -2.03
XRN1-206ENST00000467077 NADK2Q4G0N4 442 aa2.35□□□□□ -2.03
XRN1-206ENST00000467077 RABGAP1LQ5R372 815 aa2.35□□□□□ -2.03
XRN1-206ENST00000467077 C9orf129Q5T035 196 aaKnown RBP2.35□□□□□ -2.03
XRN1-206ENST00000467077 TPRG1LQ5T0D9 272 aa2.35□□□□□ -2.03
XRN1-206ENST00000467077 FAM219BQ5XKK7 198 aa2.35□□□□□ -2.03
XRN1-206ENST00000467077 CCDC73Q6ZRK6 1079 aa2.35□□□□□ -2.03
XRN1-206ENST00000467077 VPS36Q86VN1 386 aa2.35□□□□□ -2.03
XRN1-206ENST00000467077 UBQLNLQ8IYU4 475 aa2.35□□□□□ -2.03
XRN1-206ENST00000467077 ELMOD2Q8IZ81 293 aa2.35□□□□□ -2.03
XRN1-206ENST00000467077 ZNF619Q8N2I2 560 aa2.35□□□□□ -2.03
XRN1-206ENST00000467077 LRRC17Q8N6Y2 441 aa2.35□□□□□ -2.03
XRN1-206ENST00000467077 CCDC112Q8NEF3 446 aa2.35□□□□□ -2.03
XRN1-206ENST00000467077 OR6C4Q8NGE1 309 aa2.35□□□□□ -2.03
XRN1-206ENST00000467077 OR2A12Q8NGT7 310 aa2.35□□□□□ -2.03
XRN1-206ENST00000467077 TMEM37Q8WXS4 190 aa2.35□□□□□ -2.03
XRN1-206ENST00000467077 STARD8Q92502 1023 aa2.35□□□□□ -2.03
XRN1-206ENST00000467077 PHYHIPQ92561 330 aa2.35□□□□□ -2.03
XRN1-206ENST00000467077 TMEM45BQ96B21 275 aa2.35□□□□□ -2.03
XRN1-206ENST00000467077 NSMCE2Q96MF7 247 aa2.35□□□□□ -2.03
XRN1-206ENST00000467077 CCT8L2Q96SF2 557 aa2.35□□□□□ -2.03
XRN1-206ENST00000467077 EBF4Q9BQW3 602 aa2.35□□□□□ -2.03
XRN1-206ENST00000467077 FEM1AQ9BSK4 669 aa2.35□□□□□ -2.03
XRN1-206ENST00000467077 DDA1Q9BW61 102 aa2.35□□□□□ -2.03
XRN1-206ENST00000467077 NLNQ9BYT8 704 aa2.35□□□□□ -2.03
XRN1-206ENST00000467077 CYP3A43Q9HB55 503 aa2.35□□□□□ -2.03
XRN1-206ENST00000467077 NRN1Q9NPD7 142 aa2.35□□□□□ -2.03
XRN1-206ENST00000467077 CISHQ9NSE2 258 aa2.35□□□□□ -2.03
XRN1-206ENST00000467077 NINJ2Q9NZG7 142 aa2.35□□□□□ -2.03
XRN1-206ENST00000467077 LHX3Q9UBR4 397 aa2.35□□□□□ -2.03
XRN1-206ENST00000467077 SEC14L4Q9UDX3 406 aa2.35□□□□□ -2.03
XRN1-206ENST00000467077 XPO7Q9UIA9 1087 aaKnown RBP2.35□□□□□ -2.03
XRN1-206ENST00000467077 PLEKHA6Q9Y2H5 1048 aa2.35□□□□□ -2.03
XRN1-206ENST00000467077 ZNF175Q9Y473 711 aa2.35□□□□□ -2.03
XRN1-206ENST00000467077 ATG4BQ9Y4P1 393 aa2.35□□□□□ -2.03
XRN1-206ENST00000467077 MED13LQ71F56 2210 aa2.35□□□□□ -2.03
XRN1-206ENST00000467077 NUP210LQ5VU65 1888 aa2.35□□□□□ -2.03
XRN1-206ENST00000467077 CREBBPQ92793 2442 aa2.34□□□□□ -2.03
XRN1-206ENST00000467077 NIPBLQ6KC79 2804 aaeCLIP2.34□□□□□ -2.03
XRN1-206ENST00000467077 SYNJ2BP-COX16A0A087WUM0 186 aa2.34□□□□□ -2.03
XRN1-206ENST00000467077 IGHV3-35A0A0C4DH35 117 aa2.34□□□□□ -2.03
XRN1-206ENST00000467077 TMEM110-MUSTN1A8MSY1 372 aa2.34□□□□□ -2.03
XRN1-206ENST00000467077 NUDT21O43809 227 aaKnown RBP2.34□□□□□ -2.03
XRN1-206ENST00000467077 TM7SF2O76062 418 aa2.34□□□□□ -2.03
XRN1-206ENST00000467077 STK17BO94768 372 aa2.34□□□□□ -2.03
XRN1-206ENST00000467077 ADCY5O95622 1261 aa2.34□□□□□ -2.03
XRN1-206ENST00000467077 TNFP01375 233 aa2.34□□□□□ -2.03
XRN1-206ENST00000467077 P0C879 139 aa2.34□□□□□ -2.03
XRN1-206ENST00000467077 UCP1P25874 307 aa2.34□□□□□ -2.03
XRN1-206ENST00000467077 PRDX6P30041 224 aa2.34□□□□□ -2.03
XRN1-206ENST00000467077 DLSTP36957 453 aa2.34□□□□□ -2.03
XRN1-206ENST00000467077 GCLMP48507 274 aa2.34□□□□□ -2.03
XRN1-206ENST00000467077 ARHGDIAP52565 204 aa2.34□□□□□ -2.03
XRN1-206ENST00000467077 PLK1P53350 603 aa2.34□□□□□ -2.03
XRN1-206ENST00000467077 ESPL1Q14674 2120 aa2.34□□□□□ -2.03
XRN1-206ENST00000467077 IRF4Q15306 451 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms