RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 TRAPPC2LH3BP13 241 aa7.92□□□□□ -1.14
APP-213ENST00000464867 PPP1R3DO95685 299 aa7.92□□□□□ -1.14
APP-213ENST00000464867 BCKDHAP12694 445 aa7.92□□□□□ -1.14
APP-213ENST00000464867 TSPAN8P19075 237 aa7.92□□□□□ -1.14
APP-213ENST00000464867 FNTAP49354 379 aa7.92□□□□□ -1.14
APP-213ENST00000464867 BTKQ06187 659 aa7.92□□□□□ -1.14
APP-213ENST00000464867 LARS2Q15031 903 aaKnown RBP7.92□□□□□ -1.14
APP-213ENST00000464867 GRTP1Q5TC63 336 aa7.92□□□□□ -1.14
APP-213ENST00000464867 TMEM225Q6GV28 225 aa7.92□□□□□ -1.14
APP-213ENST00000464867 BTNL3Q6UXE8 466 aa7.92□□□□□ -1.14
APP-213ENST00000464867 Q6YL49 198 aa7.92□□□□□ -1.14
APP-213ENST00000464867 ZNF551Q7Z340 670 aaPredicted RBP7.92□□□□□ -1.14
APP-213ENST00000464867 MDP1Q86V88 176 aa7.92□□□□□ -1.14
APP-213ENST00000464867 LRP11Q86VZ4 500 aa7.92□□□□□ -1.14
APP-213ENST00000464867 CMIPQ8IY22 773 aa7.92□□□□□ -1.14
APP-213ENST00000464867 KLHL36Q8N4N3 616 aa7.92□□□□□ -1.14
APP-213ENST00000464867 CPEB3Q8NE35 698 aaKnown RBP7.92□□□□□ -1.14
APP-213ENST00000464867 TBC1D15Q8TC07 691 aa7.92□□□□□ -1.14
APP-213ENST00000464867 CCL17Q92583 94 aa7.92□□□□□ -1.14
APP-213ENST00000464867 PMM1Q92871 262 aa7.92□□□□□ -1.14
APP-213ENST00000464867 ZNF524Q96C55 264 aa7.92□□□□□ -1.14
APP-213ENST00000464867 DDIT4LQ96D03 193 aa7.92□□□□□ -1.14
APP-213ENST00000464867 PHF21BQ96EK2 531 aa7.92□□□□□ -1.14
APP-213ENST00000464867 ELMOD3Q96FG2 381 aa7.92□□□□□ -1.14
APP-213ENST00000464867 OTUB1Q96FW1 271 aaPredicted RBP7.92□□□□□ -1.14
APP-213ENST00000464867 PRDM13Q9H4Q3 707 aa7.92□□□□□ -1.14
APP-213ENST00000464867 SAP30LQ9HAJ7 183 aa7.92□□□□□ -1.14
APP-213ENST00000464867 SIRT3Q9NTG7 399 aaPredicted RBP7.92□□□□□ -1.14
APP-213ENST00000464867 TAAR3PQ9P1P4 343 aa7.92□□□□□ -1.14
APP-213ENST00000464867 MYEF2Q9P2K5 600 aaKnown RBP7.92□□□□□ -1.14
APP-213ENST00000464867 PCTPQ9UKL6 214 aa7.92□□□□□ -1.14
APP-213ENST00000464867 SOX21Q9Y651 276 aaPredicted RBP7.92□□□□□ -1.14
APP-213ENST00000464867 DSPPQ9NZW4 1301 aa7.92□□□□□ -1.14
APP-213ENST00000464867 TRAV40A0A0B4J280 105 aa7.91□□□□□ -1.14
APP-213ENST00000464867 STX16-NPEPL1H3BU86 382 aa7.91□□□□□ -1.14
APP-213ENST00000464867 MANBAO00462 879 aa7.91□□□□□ -1.14
APP-213ENST00000464867 STX16O14662 325 aa7.91□□□□□ -1.14
APP-213ENST00000464867 SMIM24O75264 130 aa7.91□□□□□ -1.14
APP-213ENST00000464867 PLATP00750 562 aa7.91□□□□□ -1.14
APP-213ENST00000464867 CCNA2P20248 432 aa7.91□□□□□ -1.14
APP-213ENST00000464867 BPIFB3P59826 476 aa7.91□□□□□ -1.14
APP-213ENST00000464867 ARF1P84077 181 aaKnown RBP7.91□□□□□ -1.14
APP-213ENST00000464867 ROR2Q01974 943 aaKnown RBP7.91□□□□□ -1.14
APP-213ENST00000464867 MOGQ16653 247 aa7.91□□□□□ -1.14
APP-213ENST00000464867 PRSS53Q2L4Q9 553 aa7.91□□□□□ -1.14
APP-213ENST00000464867 FAM209AQ5JX71 171 aa7.91□□□□□ -1.14
APP-213ENST00000464867 SPDYAQ5MJ70 313 aa7.91□□□□□ -1.14
APP-213ENST00000464867 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.91□□□□□ -1.14
APP-213ENST00000464867 LRRN1Q6UXK5 716 aa7.91□□□□□ -1.14
APP-213ENST00000464867 GRINAQ7Z429 371 aa7.91□□□□□ -1.14
APP-213ENST00000464867 CTAGE3PQ8IX95 158 aa7.91□□□□□ -1.14
APP-213ENST00000464867 SPICQ8N5J4 248 aa7.91□□□□□ -1.14
APP-213ENST00000464867 OR10S1Q8NGN2 331 aa7.91□□□□□ -1.14
APP-213ENST00000464867 DCAKDQ8WVC6 231 aa7.91□□□□□ -1.14
APP-213ENST00000464867 SSMEM1Q8WWF3 244 aa7.91□□□□□ -1.14
APP-213ENST00000464867 CDS1Q92903 461 aa7.91□□□□□ -1.14
APP-213ENST00000464867 C16orf58Q96GQ5 468 aa7.91□□□□□ -1.14
APP-213ENST00000464867 APIPQ96GX9 242 aa7.91□□□□□ -1.14
APP-213ENST00000464867 ZNF385AQ96PM9 386 aaKnown RBP7.91□□□□□ -1.14
APP-213ENST00000464867 STACQ99469 402 aa7.91□□□□□ -1.14
APP-213ENST00000464867 CCDC106Q9BWC9 280 aa7.91□□□□□ -1.14
APP-213ENST00000464867 OR11A1Q9GZK7 315 aa7.91□□□□□ -1.14
APP-213ENST00000464867 CTPS2Q9NRF8 586 aa7.91□□□□□ -1.14
APP-213ENST00000464867 DUSP22Q9NRW4 184 aa7.91□□□□□ -1.14
APP-213ENST00000464867 SLCO1C1Q9NYB5 712 aa7.91□□□□□ -1.14
APP-213ENST00000464867 IL20RAQ9UHF4 553 aa7.91□□□□□ -1.14
APP-213ENST00000464867 PCDHGB4Q9UN71 923 aa7.91□□□□□ -1.14
APP-213ENST00000464867 PCDHGB5Q9Y5G0 923 aa7.91□□□□□ -1.14
APP-213ENST00000464867 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.9□□□□□ -1.14
APP-213ENST00000464867 PDPK1O15530 556 aa7.9□□□□□ -1.14
APP-213ENST00000464867 CSTAP01040 98 aa7.9□□□□□ -1.14
APP-213ENST00000464867 UBTFL6P0CB48 400 aaPredicted RBP7.9□□□□□ -1.14
APP-213ENST00000464867 ZNF35P13682 527 aa7.9□□□□□ -1.14
APP-213ENST00000464867 HMOX2P30519 316 aa7.9□□□□□ -1.14
APP-213ENST00000464867 SELENOPP49908 381 aa7.9□□□□□ -1.14
APP-213ENST00000464867 KLF3P57682 345 aaPredicted RBP7.9□□□□□ -1.14
APP-213ENST00000464867 PAX8Q06710 450 aa7.9□□□□□ -1.14
APP-213ENST00000464867 BST1Q10588 318 aa7.9□□□□□ -1.14
APP-213ENST00000464867 LCP2Q13094 533 aa7.9□□□□□ -1.14
APP-213ENST00000464867 TSTQ16762 297 aaKnown RBP7.9□□□□□ -1.14
APP-213ENST00000464867 GSG1Q2KHT4 349 aa7.9□□□□□ -1.14
APP-213ENST00000464867 KRTAP19-4Q3LI73 84 aa7.9□□□□□ -1.14
APP-213ENST00000464867 ESCO2Q56NI9 601 aa7.9□□□□□ -1.14
APP-213ENST00000464867 TTMPQ5BVD1 217 aa7.9□□□□□ -1.14
APP-213ENST00000464867 DCST2Q5T1A1 773 aa7.9□□□□□ -1.14
APP-213ENST00000464867 PRAMEF8Q5VWM4 474 aa7.9□□□□□ -1.14
APP-213ENST00000464867 PRAMEF7Q5VXH5 474 aa7.9□□□□□ -1.14
APP-213ENST00000464867 RGS7BPQ6MZT1 257 aaPredicted RBP7.9□□□□□ -1.14
APP-213ENST00000464867 NIPAL3Q6P499 406 aa7.9□□□□□ -1.14
APP-213ENST00000464867 C1orf174Q8IYL3 243 aa7.9□□□□□ -1.14
APP-213ENST00000464867 ZIC4Q8N9L1 334 aa7.9□□□□□ -1.14
APP-213ENST00000464867 OR4S1Q8NGB4 309 aa7.9□□□□□ -1.14
APP-213ENST00000464867 ADAMTS15Q8TE58 950 aa7.9□□□□□ -1.14
APP-213ENST00000464867 PYROXD1Q8WU10 500 aa7.9□□□□□ -1.14
APP-213ENST00000464867 PHF21AQ96BD5 680 aa7.9□□□□□ -1.14
APP-213ENST00000464867 UPRTQ96BW1 309 aa7.9□□□□□ -1.14
APP-213ENST00000464867 GIMAP5Q96F15 307 aa7.9□□□□□ -1.14
APP-213ENST00000464867 MARS2Q96GW9 593 aaKnown RBP7.9□□□□□ -1.14
APP-213ENST00000464867 ACTRT3Q9BYD9 372 aa7.9□□□□□ -1.14
APP-213ENST00000464867 LINC00470Q9BZP3 86 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms