RNA–Protein interactions for RNA: ENST00000464012.1

CCHCR1-210, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 2

Gene CCHCR1, Length 512 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-210ENST00000464012 ARHGDIGQ99819 225 aa16.83■□□□□ 0.28
CCHCR1-210ENST00000464012 KCNS3Q9BQ31 491 aa16.83■□□□□ 0.28
CCHCR1-210ENST00000464012 REG4Q9BYZ8 158 aa16.83■□□□□ 0.28
CCHCR1-210ENST00000464012 KAT8Q9H7Z6 458 aaKnown RBP16.83■□□□□ 0.28
CCHCR1-210ENST00000464012 EVA1AQ9H8M9 152 aa16.83■□□□□ 0.28
CCHCR1-210ENST00000464012 FGFR1OP2Q9NVK5 253 aa16.83■□□□□ 0.28
CCHCR1-210ENST00000464012 INAFM1C9JVW0 142 aa16.82■□□□□ 0.28
CCHCR1-210ENST00000464012 FBP2O00757 339 aa16.82■□□□□ 0.28
CCHCR1-210ENST00000464012 TRAF3IP2O43734 574 aaPredicted RBP16.82■□□□□ 0.28
CCHCR1-210ENST00000464012 AKAP8O43823 692 aaKnown RBP16.82■□□□□ 0.28
CCHCR1-210ENST00000464012 FZD7O75084 574 aa16.82■□□□□ 0.28
CCHCR1-210ENST00000464012 SEC14L2O76054 403 aa16.82■□□□□ 0.28
CCHCR1-210ENST00000464012 ZNF432O94892 652 aa16.82■□□□□ 0.28
CCHCR1-210ENST00000464012 HPRP00739 348 aa16.82■□□□□ 0.28
CCHCR1-210ENST00000464012 HLA-DOBP13765 273 aa16.82■□□□□ 0.28
CCHCR1-210ENST00000464012 PPP2R2BQ00005 443 aa16.82■□□□□ 0.28
CCHCR1-210ENST00000464012 POU3F1Q03052 451 aaPredicted RBP16.82■□□□□ 0.28
CCHCR1-210ENST00000464012 NPTX1Q15818 432 aa16.82■□□□□ 0.28
CCHCR1-210ENST00000464012 METTL21CQ5VZV1 264 aa16.82■□□□□ 0.28
CCHCR1-210ENST00000464012 ZNF544Q6NX49 715 aa16.82■□□□□ 0.28
CCHCR1-210ENST00000464012 ANKRD16Q6P6B7 361 aa16.82■□□□□ 0.28
CCHCR1-210ENST00000464012 NET1Q7Z628 596 aaPredicted RBP16.82■□□□□ 0.28
CCHCR1-210ENST00000464012 OR6T1Q8NGN1 323 aa16.82■□□□□ 0.28
CCHCR1-210ENST00000464012 SLC38A2Q96QD8 506 aa16.82■□□□□ 0.28
CCHCR1-210ENST00000464012 OR2M2Q96R28 347 aa16.82■□□□□ 0.28
CCHCR1-210ENST00000464012 NELFAQ9H3P2 528 aa16.82■□□□□ 0.28
CCHCR1-210ENST00000464012 OBP2BQ9NPH6 170 aa16.82■□□□□ 0.28
CCHCR1-210ENST00000464012 NSD1Q96L73 2696 aaPredicted RBP16.81■□□□□ 0.28
CCHCR1-210ENST00000464012 MS4A18H0YCH9 400 aa16.81■□□□□ 0.28
CCHCR1-210ENST00000464012 SERPINI2O75830 405 aa16.81■□□□□ 0.28
CCHCR1-210ENST00000464012 PCGF2P35227 344 aa16.81■□□□□ 0.28
CCHCR1-210ENST00000464012 SH3BGRP55822 239 aaPredicted RBP16.81■□□□□ 0.28
CCHCR1-210ENST00000464012 ARF1P84077 181 aaKnown RBP16.81■□□□□ 0.28
CCHCR1-210ENST00000464012 PMS2P3Q13401 168 aa16.81■□□□□ 0.28
CCHCR1-210ENST00000464012 MFSD13AQ14CX5 517 aa16.81■□□□□ 0.28
CCHCR1-210ENST00000464012 CEACAM16Q2WEN9 425 aa16.81■□□□□ 0.28
CCHCR1-210ENST00000464012 TRMT5Q32P41 509 aaKnown RBP16.81■□□□□ 0.28
CCHCR1-210ENST00000464012 MS4A18Q3C1V0 323 aa16.81■□□□□ 0.28
CCHCR1-210ENST00000464012 MMEL1Q495T6 779 aa16.81■□□□□ 0.28
CCHCR1-210ENST00000464012 ENTPD8Q5MY95 495 aa16.81■□□□□ 0.28
CCHCR1-210ENST00000464012 PATL1Q86TB9 770 aaKnown RBP16.81■□□□□ 0.28
CCHCR1-210ENST00000464012 RBM45Q8IUH3 476 aaKnown RBP16.81■□□□□ 0.28
CCHCR1-210ENST00000464012 SLC30A8Q8IWU4 369 aa16.81■□□□□ 0.28
CCHCR1-210ENST00000464012 ADPRHL1Q8NDY3 354 aa16.81■□□□□ 0.28
CCHCR1-210ENST00000464012 PIK3C3Q8NEB9 887 aa16.81■□□□□ 0.28
CCHCR1-210ENST00000464012 OR4D11Q8NGI4 311 aa16.81■□□□□ 0.28
CCHCR1-210ENST00000464012 BOD1Q96IK1 185 aa16.81■□□□□ 0.28
CCHCR1-210ENST00000464012 EMC6Q9BV81 110 aa16.81■□□□□ 0.28
CCHCR1-210ENST00000464012 CRLF2Q9HC73 371 aa16.81■□□□□ 0.28
CCHCR1-210ENST00000464012 GPR35Q9HC97 309 aa16.81■□□□□ 0.28
CCHCR1-210ENST00000464012 MED29Q9NX70 200 aa16.81■□□□□ 0.28
CCHCR1-210ENST00000464012 CORINQ9Y5Q5 1042 aa16.81■□□□□ 0.28
CCHCR1-210ENST00000464012 FN1P02751 2386 aaKnown RBP16.81■□□□□ 0.28
CCHCR1-210ENST00000464012 NAV3Q8IVL0 2385 aa16.8■□□□□ 0.28
CCHCR1-210ENST00000464012 ARPC4-TTLL3A0A0A6YYG9 625 aa16.8■□□□□ 0.28
CCHCR1-210ENST00000464012 M0R3G1 203 aa16.8■□□□□ 0.28
CCHCR1-210ENST00000464012 CHP2O43745 196 aa16.8■□□□□ 0.28
CCHCR1-210ENST00000464012 APOBEC3AP31941 199 aaPredicted RBP16.8■□□□□ 0.28
CCHCR1-210ENST00000464012 ARFIP2P53365 341 aa16.8■□□□□ 0.28
CCHCR1-210ENST00000464012 RAB35Q15286 201 aa16.8■□□□□ 0.28
CCHCR1-210ENST00000464012 RABL3Q5HYI8 236 aa16.8■□□□□ 0.28
CCHCR1-210ENST00000464012 PHYHD1Q5SRE7 291 aa16.8■□□□□ 0.28
CCHCR1-210ENST00000464012 SWT1Q5T5J6 900 aaKnown RBP16.8■□□□□ 0.28
CCHCR1-210ENST00000464012 C1QTNF12Q5T7M4 302 aa16.8■□□□□ 0.28
CCHCR1-210ENST00000464012 INTS11Q5TA45 600 aaKnown RBP16.8■□□□□ 0.28
CCHCR1-210ENST00000464012 CGB2Q6NT52 195 aa16.8■□□□□ 0.28
CCHCR1-210ENST00000464012 ZNF613Q6PF04 617 aa16.8■□□□□ 0.28
CCHCR1-210ENST00000464012 TMEM123Q8N131 208 aa16.8■□□□□ 0.28
CCHCR1-210ENST00000464012 OR6S1Q8NH40 331 aa16.8■□□□□ 0.28
CCHCR1-210ENST00000464012 TAMM41Q96BW9 452 aa16.8■□□□□ 0.28
CCHCR1-210ENST00000464012 FBXO17Q96EF6 278 aa16.8■□□□□ 0.28
CCHCR1-210ENST00000464012 ZNF837Q96EG3 531 aaPredicted RBP16.8■□□□□ 0.28
CCHCR1-210ENST00000464012 SLC41A3Q96GZ6 507 aa16.8■□□□□ 0.28
CCHCR1-210ENST00000464012 TMEM43Q9BTV4 400 aa16.8■□□□□ 0.28
CCHCR1-210ENST00000464012 SEC61A2Q9H9S3 476 aa16.8■□□□□ 0.28
CCHCR1-210ENST00000464012 ARFGEF3Q5TH69 2177 aa16.79■□□□□ 0.28
CCHCR1-210ENST00000464012 C11orf98E9PRG8 122 aa16.79■□□□□ 0.28
CCHCR1-210ENST00000464012 RPL36A-HNRNPH2H7BZ11 118 aa16.79■□□□□ 0.28
CCHCR1-210ENST00000464012 KPNA4O00629 521 aaPredicted RBP16.79■□□□□ 0.28
CCHCR1-210ENST00000464012 MRASO14807 208 aa16.79■□□□□ 0.28
CCHCR1-210ENST00000464012 FMO6PO60774 539 aa16.79■□□□□ 0.28
CCHCR1-210ENST00000464012 C8BP07358 591 aa16.79■□□□□ 0.28
CCHCR1-210ENST00000464012 VIMP08670 466 aaKnown RBP16.79■□□□□ 0.28
CCHCR1-210ENST00000464012 CECR9P0C854 216 aa16.79■□□□□ 0.28
CCHCR1-210ENST00000464012 CD247P20963 164 aa16.79■□□□□ 0.28
CCHCR1-210ENST00000464012 AHCYP23526 432 aa16.79■□□□□ 0.28
CCHCR1-210ENST00000464012 CAPZA2P47755 286 aa16.79■□□□□ 0.28
CCHCR1-210ENST00000464012 KRTAP1-1Q07627 177 aa16.79■□□□□ 0.28
CCHCR1-210ENST00000464012 PUDPQ08623 228 aa16.79■□□□□ 0.28
CCHCR1-210ENST00000464012 CYLC2Q14093 348 aaPredicted RBP16.79■□□□□ 0.28
CCHCR1-210ENST00000464012 VMACQ2NL98 169 aa16.79■□□□□ 0.28
CCHCR1-210ENST00000464012 REP15Q6BDI9 236 aa16.79■□□□□ 0.28
CCHCR1-210ENST00000464012 NANOGP8Q6NSW7 305 aa16.79■□□□□ 0.28
CCHCR1-210ENST00000464012 WDR88Q6ZMY6 472 aa16.79■□□□□ 0.28
CCHCR1-210ENST00000464012 SCAIQ8N9R8 606 aa16.79■□□□□ 0.28
CCHCR1-210ENST00000464012 MAGEE2Q8TD90 523 aaPredicted RBP16.79■□□□□ 0.28
CCHCR1-210ENST00000464012 ADAMTS16Q8TE57 1224 aa16.79■□□□□ 0.28
CCHCR1-210ENST00000464012 TXNDC15Q96J42 360 aa16.79■□□□□ 0.28
CCHCR1-210ENST00000464012 RHNO1Q9BSD3 238 aa16.79■□□□□ 0.28
CCHCR1-210ENST00000464012 NANOGQ9H9S0 305 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms