RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 C6orf52Q5T4I8 152 aa12.8□□□□□ -0.36
COL6A1-202ENST00000463060 WLSQ5T9L3 541 aa12.8□□□□□ -0.36
COL6A1-202ENST00000463060 TTC23Q5W5X9 447 aa12.8□□□□□ -0.36
COL6A1-202ENST00000463060 ZIC4Q8N9L1 334 aa12.8□□□□□ -0.36
COL6A1-202ENST00000463060 FAM57AQ8TBR7 257 aa12.8□□□□□ -0.36
COL6A1-202ENST00000463060 ROBO4Q8WZ75 1007 aa12.8□□□□□ -0.36
COL6A1-202ENST00000463060 ZNF570Q96NI8 536 aa12.8□□□□□ -0.36
COL6A1-202ENST00000463060 OXGR1Q96P68 337 aa12.8□□□□□ -0.36
COL6A1-202ENST00000463060 SF3B5Q9BWJ5 86 aaKnown RBP12.8□□□□□ -0.36
COL6A1-202ENST00000463060 INIPQ9NRY2 104 aa12.8□□□□□ -0.36
COL6A1-202ENST00000463060 PNPLA3Q9NST1 481 aa12.8□□□□□ -0.36
COL6A1-202ENST00000463060 TBC1D23Q9NUY8 699 aa12.8□□□□□ -0.36
COL6A1-202ENST00000463060 CLCF1Q9UBD9 225 aa12.8□□□□□ -0.36
COL6A1-202ENST00000463060 RAB26Q9ULW5 256 aa12.8□□□□□ -0.36
COL6A1-202ENST00000463060 ZNF175Q9Y473 711 aa12.8□□□□□ -0.36
COL6A1-202ENST00000463060 SVILO95425 2214 aa12.8□□□□□ -0.36
COL6A1-202ENST00000463060 ZFYVE26Q68DK2 2539 aa12.8□□□□□ -0.36
COL6A1-202ENST00000463060 ALPK2Q86TB3 2170 aa12.79□□□□□ -0.36
COL6A1-202ENST00000463060 SHANK1Q9Y566 2161 aa12.79□□□□□ -0.36
COL6A1-202ENST00000463060 IGKV3D-15A0A087WSY6 115 aa12.79□□□□□ -0.36
COL6A1-202ENST00000463060 IGHV3-15A0A0B4J1V0 119 aa12.79□□□□□ -0.36
COL6A1-202ENST00000463060 TTLL8A6PVC2 850 aa12.79□□□□□ -0.36
COL6A1-202ENST00000463060 CLCA1A8K7I4 914 aa12.79□□□□□ -0.36
COL6A1-202ENST00000463060 TRAF3IP2O43734 574 aaPredicted RBP12.79□□□□□ -0.36
COL6A1-202ENST00000463060 IDH3BO43837 385 aa12.79□□□□□ -0.36
COL6A1-202ENST00000463060 AQP8O94778 261 aa12.79□□□□□ -0.36
COL6A1-202ENST00000463060 PPP1R3DO95685 299 aa12.79□□□□□ -0.36
COL6A1-202ENST00000463060 GNAO1P09471 354 aa12.79□□□□□ -0.36
COL6A1-202ENST00000463060 EDN3P14138 238 aa12.79□□□□□ -0.36
COL6A1-202ENST00000463060 GTF2E2P29084 291 aaKnown RBP12.79□□□□□ -0.36
COL6A1-202ENST00000463060 PGGHGQ32M88 737 aa12.79□□□□□ -0.36
COL6A1-202ENST00000463060 CLEC12AQ5QGZ9 265 aa12.79□□□□□ -0.36
COL6A1-202ENST00000463060 ARMC4Q5T2S8 1044 aa12.79□□□□□ -0.36
COL6A1-202ENST00000463060 TMEM225Q6GV28 225 aa12.79□□□□□ -0.36
COL6A1-202ENST00000463060 SLC27A4Q6P1M0 643 aa12.79□□□□□ -0.36
COL6A1-202ENST00000463060 PLXDC2Q6UX71 529 aa12.79□□□□□ -0.36
COL6A1-202ENST00000463060 FCRLAQ7L513 359 aa12.79□□□□□ -0.36
COL6A1-202ENST00000463060 IGFN1Q86VF2 1251 aa12.79□□□□□ -0.36
COL6A1-202ENST00000463060 WDFY1Q8IWB7 410 aa12.79□□□□□ -0.36
COL6A1-202ENST00000463060 IQCF1Q8N6M8 205 aa12.79□□□□□ -0.36
COL6A1-202ENST00000463060 ANKK1Q8NFD2 765 aa12.79□□□□□ -0.36
COL6A1-202ENST00000463060 OR2T33Q8NG76 320 aa12.79□□□□□ -0.36
COL6A1-202ENST00000463060 OR5M9Q8NGP3 310 aa12.79□□□□□ -0.36
COL6A1-202ENST00000463060 FNDC9Q8TBE3 224 aa12.79□□□□□ -0.36
COL6A1-202ENST00000463060 TEX47Q8TBZ9 253 aa12.79□□□□□ -0.36
COL6A1-202ENST00000463060 RNF128Q8TEB7 428 aa12.79□□□□□ -0.36
COL6A1-202ENST00000463060 CYGBQ8WWM9 190 aa12.79□□□□□ -0.36
COL6A1-202ENST00000463060 ZHX1-C8orf76Q96EF9 292 aa12.79□□□□□ -0.36
COL6A1-202ENST00000463060 DDOQ99489 341 aa12.79□□□□□ -0.36
COL6A1-202ENST00000463060 KATNB1Q9BVA0 655 aa12.79□□□□□ -0.36
COL6A1-202ENST00000463060 IFT27Q9BW83 186 aa12.79□□□□□ -0.36
COL6A1-202ENST00000463060 TXNIPQ9H3M7 391 aa12.79□□□□□ -0.36
COL6A1-202ENST00000463060 ZNF346Q9UL40 294 aaKnown RBP12.79□□□□□ -0.36
COL6A1-202ENST00000463060 BAIAP2Q9UQB8 552 aa12.79□□□□□ -0.36
COL6A1-202ENST00000463060 ADAM18Q9Y3Q7 739 aa12.79□□□□□ -0.36
COL6A1-202ENST00000463060 NOX1Q9Y5S8 564 aa12.79□□□□□ -0.36
COL6A1-202ENST00000463060 IER3IP1Q9Y5U9 82 aa12.79□□□□□ -0.36
COL6A1-202ENST00000463060 BAHCC1Q9P281 2608 aa12.79□□□□□ -0.36
COL6A1-202ENST00000463060 KDM4EB2RXH2 506 aaPredicted RBP12.78□□□□□ -0.36
COL6A1-202ENST00000463060 C11orf98E9PRG8 122 aa12.78□□□□□ -0.36
COL6A1-202ENST00000463060 RNF13O43567 381 aa12.78□□□□□ -0.36
COL6A1-202ENST00000463060 DENRO43583 198 aaKnown RBP12.78□□□□□ -0.36
COL6A1-202ENST00000463060 OR6A2O95222 327 aa12.78□□□□□ -0.36
COL6A1-202ENST00000463060 SYNGR4O95473 234 aa12.78□□□□□ -0.36
COL6A1-202ENST00000463060 TGM6O95932 706 aa12.78□□□□□ -0.36
COL6A1-202ENST00000463060 NTF4P34130 210 aa12.78□□□□□ -0.36
COL6A1-202ENST00000463060 GRK5P34947 590 aa12.78□□□□□ -0.36
COL6A1-202ENST00000463060 SMSP52788 366 aa12.78□□□□□ -0.36
COL6A1-202ENST00000463060 ERVK-25P63136 954 aa12.78□□□□□ -0.36
COL6A1-202ENST00000463060 MYBPC1Q00872 1141 aa12.78□□□□□ -0.36
COL6A1-202ENST00000463060 NFATC3Q12968 1075 aa12.78□□□□□ -0.36
COL6A1-202ENST00000463060 PON3Q15166 354 aa12.78□□□□□ -0.36
COL6A1-202ENST00000463060 ACKR1Q16570 336 aa12.78□□□□□ -0.36
COL6A1-202ENST00000463060 GPR139Q6DWJ6 353 aa12.78□□□□□ -0.36
COL6A1-202ENST00000463060 RTL6Q6ICC9 239 aa12.78□□□□□ -0.36
COL6A1-202ENST00000463060 CREB3L2Q70SY1 520 aa12.78□□□□□ -0.36
COL6A1-202ENST00000463060 ZNF555Q8NEP9 628 aa12.78□□□□□ -0.36
COL6A1-202ENST00000463060 OR52L1Q8NGH7 329 aa12.78□□□□□ -0.36
COL6A1-202ENST00000463060 ZNF519Q8TB69 540 aa12.78□□□□□ -0.36
COL6A1-202ENST00000463060 UBE2FQ969M7 185 aa12.78□□□□□ -0.36
COL6A1-202ENST00000463060 TXNDC15Q96J42 360 aa12.78□□□□□ -0.36
COL6A1-202ENST00000463060 Q96M85 177 aa12.78□□□□□ -0.36
COL6A1-202ENST00000463060 MUS81Q96NY9 551 aa12.78□□□□□ -0.36
COL6A1-202ENST00000463060 ERMAPQ96PL5 475 aaPredicted RBP12.78□□□□□ -0.36
COL6A1-202ENST00000463060 TSPAN32Q96QS1 320 aa12.78□□□□□ -0.36
COL6A1-202ENST00000463060 ANKRD60Q9BZ19 345 aa12.78□□□□□ -0.36
COL6A1-202ENST00000463060 RNF122Q9H9V4 155 aa12.78□□□□□ -0.36
COL6A1-202ENST00000463060 CALHM2Q9HA72 323 aa12.78□□□□□ -0.36
COL6A1-202ENST00000463060 GMPPBQ9Y5P6 360 aa12.78□□□□□ -0.36
COL6A1-202ENST00000463060 CD8B2A6NJW9 211 aa12.77□□□□□ -0.37
COL6A1-202ENST00000463060 SURF4O15260 269 aa12.77□□□□□ -0.37
COL6A1-202ENST00000463060 CLIC3O95833 236 aa12.77□□□□□ -0.37
COL6A1-202ENST00000463060 HMGN1P05114 100 aa12.77□□□□□ -0.37
COL6A1-202ENST00000463060 HOXD4P09016 255 aaPredicted RBP12.77□□□□□ -0.37
COL6A1-202ENST00000463060 GABRB1P18505 474 aa12.77□□□□□ -0.37
COL6A1-202ENST00000463060 AHCYP23526 432 aa12.77□□□□□ -0.37
COL6A1-202ENST00000463060 SDHAP31040 664 aa12.77□□□□□ -0.37
COL6A1-202ENST00000463060 RPL4P36578 427 aaKnown RBP12.77□□□□□ -0.37
COL6A1-202ENST00000463060 RPS6KA3P51812 740 aa12.77□□□□□ -0.37
COL6A1-202ENST00000463060 MLLT10P55197 1068 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms