RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 ZPLD1Q8TCW7 415 aa13.12□□□□□ -0.31
HDAC6-213ENST00000462730 RNF138Q8WVD3 245 aa13.12□□□□□ -0.31
HDAC6-213ENST00000462730 CAPSLQ8WWF8 208 aa13.12□□□□□ -0.31
HDAC6-213ENST00000462730 SMPDL3BQ92485 455 aa13.12□□□□□ -0.31
HDAC6-213ENST00000462730 TMEM203Q969S6 136 aa13.12□□□□□ -0.31
HDAC6-213ENST00000462730 ZMYND19Q96E35 227 aaPredicted RBP13.12□□□□□ -0.31
HDAC6-213ENST00000462730 Q96M85 177 aa13.12□□□□□ -0.31
HDAC6-213ENST00000462730 SNX18Q96RF0 628 aa13.12□□□□□ -0.31
HDAC6-213ENST00000462730 CCDC32Q9BV29 185 aa13.12□□□□□ -0.31
HDAC6-213ENST00000462730 ASPNQ9BXN1 380 aa13.12□□□□□ -0.31
HDAC6-213ENST00000462730 INPP5EQ9NRR6 644 aa13.12□□□□□ -0.31
HDAC6-213ENST00000462730 HAO2Q9NYQ3 351 aa13.12□□□□□ -0.31
HDAC6-213ENST00000462730 IMPA2O14732 288 aa13.11□□□□□ -0.31
HDAC6-213ENST00000462730 LRRTM2O43300 516 aa13.11□□□□□ -0.31
HDAC6-213ENST00000462730 AKAP8O43823 692 aaKnown RBP13.11□□□□□ -0.31
HDAC6-213ENST00000462730 SSX4O60224 188 aa13.11□□□□□ -0.31
HDAC6-213ENST00000462730 F13BP05160 661 aa13.11□□□□□ -0.31
HDAC6-213ENST00000462730 CD63P08962 238 aa13.11□□□□□ -0.31
HDAC6-213ENST00000462730 FBXO45P0C2W1 286 aa13.11□□□□□ -0.31
HDAC6-213ENST00000462730 LGALS3BPQ08380 585 aa13.11□□□□□ -0.31
HDAC6-213ENST00000462730 AGAP6Q5VW22 663 aa13.11□□□□□ -0.31
HDAC6-213ENST00000462730 LEG1Q6P5S2 330 aa13.11□□□□□ -0.31
HDAC6-213ENST00000462730 SPATC1Q76KD6 591 aa13.11□□□□□ -0.31
HDAC6-213ENST00000462730 JAZF1Q86VZ6 243 aa13.11□□□□□ -0.31
HDAC6-213ENST00000462730 ADGRG3Q86Y34 549 aa13.11□□□□□ -0.31
HDAC6-213ENST00000462730 KLBQ86Z14 1044 aa13.11□□□□□ -0.31
HDAC6-213ENST00000462730 OR10G3Q8NGC4 313 aa13.11□□□□□ -0.31
HDAC6-213ENST00000462730 OR51L1Q8NGJ5 315 aa13.11□□□□□ -0.31
HDAC6-213ENST00000462730 IMMP1LQ96LU5 166 aa13.11□□□□□ -0.31
HDAC6-213ENST00000462730 AGAP4Q96P64 663 aa13.11□□□□□ -0.31
HDAC6-213ENST00000462730 KCNS3Q9BQ31 491 aa13.11□□□□□ -0.31
HDAC6-213ENST00000462730 SLC30A2Q9BRI3 323 aa13.11□□□□□ -0.31
HDAC6-213ENST00000462730 ISG20L2Q9H9L3 353 aaKnown RBP13.11□□□□□ -0.31
HDAC6-213ENST00000462730 NEK6Q9HC98 313 aa13.11□□□□□ -0.31
HDAC6-213ENST00000462730 MED11Q9P086 117 aa13.11□□□□□ -0.31
HDAC6-213ENST00000462730 SPAARA0A1B0GVQ0 90 aa13.11□□□□□ -0.31
HDAC6-213ENST00000462730 CTDSP2O14595 271 aa13.11□□□□□ -0.31
HDAC6-213ENST00000462730 CCNKO75909 580 aa13.11□□□□□ -0.31
HDAC6-213ENST00000462730 RAB40ALP0C0E4 278 aa13.11□□□□□ -0.31
HDAC6-213ENST00000462730 FTH1P19P0C7X4 201 aa13.11□□□□□ -0.31
HDAC6-213ENST00000462730 SUMO3P55854 103 aaPredicted RBP13.11□□□□□ -0.31
HDAC6-213ENST00000462730 ACSM1Q08AH1 577 aa13.11□□□□□ -0.31
HDAC6-213ENST00000462730 POU4F2Q12837 409 aa13.11□□□□□ -0.31
HDAC6-213ENST00000462730 GALEQ14376 348 aa13.11□□□□□ -0.31
HDAC6-213ENST00000462730 EXT1Q16394 746 aa13.11□□□□□ -0.31
HDAC6-213ENST00000462730 RSBN1Q5VWQ0 802 aaPredicted RBP13.11□□□□□ -0.31
HDAC6-213ENST00000462730 ATP6V1C2Q8NEY4 427 aa13.11□□□□□ -0.31
HDAC6-213ENST00000462730 SMAP2Q8WU79 429 aaPredicted RBP13.11□□□□□ -0.31
HDAC6-213ENST00000462730 TMEM234Q8WY98 164 aa13.11□□□□□ -0.31
HDAC6-213ENST00000462730 SLC25A36Q96CQ1 311 aa13.11□□□□□ -0.31
HDAC6-213ENST00000462730 CEP19Q96LK0 163 aa13.11□□□□□ -0.31
HDAC6-213ENST00000462730 RASL10BQ96S79 203 aa13.11□□□□□ -0.31
HDAC6-213ENST00000462730 DDOQ99489 341 aa13.11□□□□□ -0.31
HDAC6-213ENST00000462730 PTDSS2Q9BVG9 487 aa13.11□□□□□ -0.31
HDAC6-213ENST00000462730 RERGLQ9H628 205 aa13.11□□□□□ -0.31
HDAC6-213ENST00000462730 METTL7AQ9H8H3 244 aa13.11□□□□□ -0.31
HDAC6-213ENST00000462730 C14orf119Q9NWQ9 140 aa13.11□□□□□ -0.31
HDAC6-213ENST00000462730 ASB6Q9NWX5 421 aa13.11□□□□□ -0.31
HDAC6-213ENST00000462730 TXNL4BQ9NX01 149 aaKnown RBP13.11□□□□□ -0.31
HDAC6-213ENST00000462730 PPP4R1LQ9P1A2 415 aa13.11□□□□□ -0.31
HDAC6-213ENST00000462730 CRNNQ9UBG3 495 aaPredicted RBP13.11□□□□□ -0.31
HDAC6-213ENST00000462730 SF3B6Q9Y3B4 125 aaKnown RBP13.11□□□□□ -0.31
HDAC6-213ENST00000462730 HRH3Q9Y5N1 445 aa13.11□□□□□ -0.31
HDAC6-213ENST00000462730 A0A075B6Q4 140 aa13.1□□□□□ -0.31
HDAC6-213ENST00000462730 NSG1A0A0A6YYJ2 146 aa13.1□□□□□ -0.31
HDAC6-213ENST00000462730 OR6C68A6NDL8 312 aa13.1□□□□□ -0.31
HDAC6-213ENST00000462730 A8MVM7 634 aa13.1□□□□□ -0.31
HDAC6-213ENST00000462730 B4DXG7 233 aa13.1□□□□□ -0.31
HDAC6-213ENST00000462730 ZNF670-ZNF695F2Z2N8 137 aa13.1□□□□□ -0.31
HDAC6-213ENST00000462730 SLC30A4O14863 429 aa13.1□□□□□ -0.31
HDAC6-213ENST00000462730 DKK1O94907 266 aa13.1□□□□□ -0.31
HDAC6-213ENST00000462730 IGHEP01854 428 aa13.1□□□□□ -0.31
HDAC6-213ENST00000462730 TRAPPC2P0DI81 140 aa13.1□□□□□ -0.31
HDAC6-213ENST00000462730 TRAPPC2BP0DI82 140 aa13.1□□□□□ -0.31
HDAC6-213ENST00000462730 APEHP13798 732 aaKnown RBP13.1□□□□□ -0.31
HDAC6-213ENST00000462730 SPI1P17947 270 aa13.1□□□□□ -0.31
HDAC6-213ENST00000462730 TCEA1P23193 301 aaKnown RBP13.1□□□□□ -0.31
HDAC6-213ENST00000462730 GABRA5P31644 462 aa13.1□□□□□ -0.31
HDAC6-213ENST00000462730 HTR3AP46098 478 aa13.1□□□□□ -0.31
HDAC6-213ENST00000462730 CAMK2BQ13554 666 aa13.1□□□□□ -0.31
HDAC6-213ENST00000462730 C1orf140Q5VVS0 124 aa13.1□□□□□ -0.31
HDAC6-213ENST00000462730 MAMDC2Q7Z304 686 aaPredicted RBP13.1□□□□□ -0.31
HDAC6-213ENST00000462730 FAM122BQ7Z309 247 aa13.1□□□□□ -0.31
HDAC6-213ENST00000462730 ST8SIA1Q92185 356 aa13.1□□□□□ -0.31
HDAC6-213ENST00000462730 RELTQ969Z4 430 aa13.1□□□□□ -0.31
HDAC6-213ENST00000462730 SPACA9Q96E40 222 aaPredicted RBP13.1□□□□□ -0.31
HDAC6-213ENST00000462730 C1GALT1C1Q96EU7 318 aa13.1□□□□□ -0.31
HDAC6-213ENST00000462730 CNN2Q99439 309 aaKnown RBP13.1□□□□□ -0.31
HDAC6-213ENST00000462730 TM9SF2Q99805 663 aa13.1□□□□□ -0.31
HDAC6-213ENST00000462730 NMNAT2Q9BZQ4 307 aa13.1□□□□□ -0.31
HDAC6-213ENST00000462730 ZNF160Q9HCG1 818 aa13.1□□□□□ -0.31
HDAC6-213ENST00000462730 GRIP1Q9Y3R0 1128 aa13.1□□□□□ -0.31
HDAC6-213ENST00000462730 PCNX3Q9H6A9 2034 aa13.1□□□□□ -0.31
HDAC6-213ENST00000462730 FREM2Q5SZK8 3169 aa13.09□□□□□ -0.31
HDAC6-213ENST00000462730 A0A1W2PQ72 361 aa13.09□□□□□ -0.31
HDAC6-213ENST00000462730 NPIPB7O75200 414 aa13.09□□□□□ -0.31
HDAC6-213ENST00000462730 TNFSF15O95150 251 aa13.09□□□□□ -0.31
HDAC6-213ENST00000462730 AHSA1O95433 338 aa13.09□□□□□ -0.31
HDAC6-213ENST00000462730 MT-ATP6P00846 226 aa13.09□□□□□ -0.31
HDAC6-213ENST00000462730 KRT8P05787 483 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms