RNA–Protein interactions for RNA: ENST00000462475.1

COL7A1-204, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 305 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-204ENST00000462475 BCL2L10Q9HD36 194 aa13.95□□□□□ -0.18
COL7A1-204ENST00000462475 A4GALTQ9NPC4 353 aa13.95□□□□□ -0.18
COL7A1-204ENST00000462475 THUMPD1Q9NXG2 353 aaKnown RBP13.95□□□□□ -0.18
COL7A1-204ENST00000462475 PCDHB14Q9Y5E9 798 aa13.95□□□□□ -0.18
COL7A1-204ENST00000462475 IGKV1D-42A0A075B6H8 117 aa13.94□□□□□ -0.18
COL7A1-204ENST00000462475 IGHV2OR16-5A0A0B4J2B6 119 aa13.94□□□□□ -0.18
COL7A1-204ENST00000462475 A0A1B0GWA3 101 aa13.94□□□□□ -0.18
COL7A1-204ENST00000462475 hCG_2039718K7EN88 272 aa13.94□□□□□ -0.18
COL7A1-204ENST00000462475 TRAF3IP2O43734 574 aaPredicted RBP13.94□□□□□ -0.18
COL7A1-204ENST00000462475 SLC43A1O75387 559 aa13.94□□□□□ -0.18
COL7A1-204ENST00000462475 TGFAP01135 160 aa13.94□□□□□ -0.18
COL7A1-204ENST00000462475 BMP2P12643 396 aa13.94□□□□□ -0.18
COL7A1-204ENST00000462475 HOXB1P14653 301 aaPredicted RBP13.94□□□□□ -0.18
COL7A1-204ENST00000462475 HOXB9P17482 250 aaPredicted RBP13.94□□□□□ -0.18
COL7A1-204ENST00000462475 HTR2AP28223 471 aa13.94□□□□□ -0.18
COL7A1-204ENST00000462475 GRPRP30550 384 aa13.94□□□□□ -0.18
COL7A1-204ENST00000462475 NPRL3Q12980 569 aa13.94□□□□□ -0.18
COL7A1-204ENST00000462475 ZCCHC24Q8N2G6 241 aaKnown RBP13.94□□□□□ -0.18
COL7A1-204ENST00000462475 GPR137CQ8N3F9 429 aa13.94□□□□□ -0.18
COL7A1-204ENST00000462475 ANKK1Q8NFD2 765 aa13.94□□□□□ -0.18
COL7A1-204ENST00000462475 BBS10Q8TAM1 723 aa13.94□□□□□ -0.18
COL7A1-204ENST00000462475 TAAR8Q969N4 342 aa13.94□□□□□ -0.18
COL7A1-204ENST00000462475 SLC35B4Q969S0 331 aa13.94□□□□□ -0.18
COL7A1-204ENST00000462475 OXGR1Q96P68 337 aa13.94□□□□□ -0.18
COL7A1-204ENST00000462475 DOK1Q99704 481 aa13.94□□□□□ -0.18
COL7A1-204ENST00000462475 RAB1BQ9H0U4 201 aa13.94□□□□□ -0.18
COL7A1-204ENST00000462475 CRLF2Q9HC73 371 aa13.94□□□□□ -0.18
COL7A1-204ENST00000462475 RPS6KB2Q9UBS0 482 aa13.94□□□□□ -0.18
COL7A1-204ENST00000462475 RAB21Q9UL25 225 aa13.94□□□□□ -0.18
COL7A1-204ENST00000462475 TMEM129A0AVI4 362 aa13.93□□□□□ -0.18
COL7A1-204ENST00000462475 CLIC1O00299 241 aa13.93□□□□□ -0.18
COL7A1-204ENST00000462475 AIM2O14862 343 aa13.93□□□□□ -0.18
COL7A1-204ENST00000462475 UBDO15205 165 aa13.93□□□□□ -0.18
COL7A1-204ENST00000462475 STAMBPO95630 424 aa13.93□□□□□ -0.18
COL7A1-204ENST00000462475 IGFBP1P08833 259 aaPredicted RBP13.93□□□□□ -0.18
COL7A1-204ENST00000462475 DAOP14920 347 aa13.93□□□□□ -0.18
COL7A1-204ENST00000462475 NPR2P20594 1047 aa13.93□□□□□ -0.18
COL7A1-204ENST00000462475 HNF1AP20823 631 aa13.93□□□□□ -0.18
COL7A1-204ENST00000462475 CBLP22681 906 aa13.93□□□□□ -0.18
COL7A1-204ENST00000462475 IL2RGP31785 369 aa13.93□□□□□ -0.18
COL7A1-204ENST00000462475 C1DQ13901 141 aaKnown RBP13.93□□□□□ -0.18
COL7A1-204ENST00000462475 CR1LQ2VPA4 569 aa13.93□□□□□ -0.18
COL7A1-204ENST00000462475 PHYHD1Q5SRE7 291 aa13.93□□□□□ -0.18
COL7A1-204ENST00000462475 FAM69AQ5T7M9 428 aa13.93□□□□□ -0.18
COL7A1-204ENST00000462475 SPATA21Q7Z572 469 aa13.93□□□□□ -0.18
COL7A1-204ENST00000462475 MDP1Q86V88 176 aa13.93□□□□□ -0.18
COL7A1-204ENST00000462475 CDK20Q8IZL9 346 aa13.93□□□□□ -0.18
COL7A1-204ENST00000462475 TMEM123Q8N131 208 aa13.93□□□□□ -0.18
COL7A1-204ENST00000462475 C10orf111Q8N326 155 aa13.93□□□□□ -0.18
COL7A1-204ENST00000462475 MIER2Q8N344 545 aa13.93□□□□□ -0.18
COL7A1-204ENST00000462475 ZNF540Q8NDQ6 660 aa13.93□□□□□ -0.18
COL7A1-204ENST00000462475 OR2M2Q96R28 347 aa13.93□□□□□ -0.18
COL7A1-204ENST00000462475 KLHL14Q9P2G3 628 aa13.93□□□□□ -0.18
COL7A1-204ENST00000462475 C5orf58C9J3I9 102 aa13.92□□□□□ -0.18
COL7A1-204ENST00000462475 OR2T1O43869 369 aa13.92□□□□□ -0.18
COL7A1-204ENST00000462475 HPRP00739 348 aa13.92□□□□□ -0.18
COL7A1-204ENST00000462475 GIFP27352 417 aa13.92□□□□□ -0.18
COL7A1-204ENST00000462475 PRKAR1BP31321 381 aa13.92□□□□□ -0.18
COL7A1-204ENST00000462475 ARR3P36575 388 aa13.92□□□□□ -0.18
COL7A1-204ENST00000462475 CAPZA2P47755 286 aa13.92□□□□□ -0.18
COL7A1-204ENST00000462475 IL1RL1Q01638 556 aa13.92□□□□□ -0.18
COL7A1-204ENST00000462475 FADDQ13158 208 aa13.92□□□□□ -0.18
COL7A1-204ENST00000462475 SNTB2Q13425 540 aaKnown RBP13.92□□□□□ -0.18
COL7A1-204ENST00000462475 KRT80Q6KB66 452 aa13.92□□□□□ -0.18
COL7A1-204ENST00000462475 CROCCP2Q86T23 111 aa13.92□□□□□ -0.18
COL7A1-204ENST00000462475 MSRB3Q8IXL7 192 aa13.92□□□□□ -0.18
COL7A1-204ENST00000462475 PIK3C3Q8NEB9 887 aa13.92□□□□□ -0.18
COL7A1-204ENST00000462475 NFKBIDQ8NI38 313 aa13.92□□□□□ -0.18
COL7A1-204ENST00000462475 SLC38A4Q969I6 547 aa13.92□□□□□ -0.18
COL7A1-204ENST00000462475 RAD21L1Q9H4I0 556 aa13.92□□□□□ -0.18
COL7A1-204ENST00000462475 C12orf10Q9HB07 376 aa13.92□□□□□ -0.18
COL7A1-204ENST00000462475 NOX3Q9HBY0 568 aa13.92□□□□□ -0.18
COL7A1-204ENST00000462475 DYNLRB1Q9NP97 96 aa13.92□□□□□ -0.18
COL7A1-204ENST00000462475 SLC25A37Q9NYZ2 338 aa13.92□□□□□ -0.18
COL7A1-204ENST00000462475 TRAV36DV7A0A075B6V5 113 aa13.91□□□□□ -0.18
COL7A1-204ENST00000462475 SH3PXD2BA1X283 911 aa13.91□□□□□ -0.18
COL7A1-204ENST00000462475 M0R3G1 203 aa13.91□□□□□ -0.18
COL7A1-204ENST00000462475 LILRA1O75019 489 aa13.91□□□□□ -0.18
COL7A1-204ENST00000462475 ARAFP10398 606 aa13.91□□□□□ -0.18
COL7A1-204ENST00000462475 HLA-DOBP13765 273 aa13.91□□□□□ -0.18
COL7A1-204ENST00000462475 ETS2P15036 469 aa13.91□□□□□ -0.18
COL7A1-204ENST00000462475 MSMPQ1L6U9 139 aa13.91□□□□□ -0.18
COL7A1-204ENST00000462475 GLIPR1L2Q4G1C9 344 aa13.91□□□□□ -0.18
COL7A1-204ENST00000462475 ALG10BQ5I7T1 473 aa13.91□□□□□ -0.18
COL7A1-204ENST00000462475 CARD17Q5XLA6 110 aa13.91□□□□□ -0.18
COL7A1-204ENST00000462475 C5orf46Q6UWT4 87 aa13.91□□□□□ -0.18
COL7A1-204ENST00000462475 H1FNTQ75WM6 255 aaPredicted RBP13.91□□□□□ -0.18
COL7A1-204ENST00000462475 WDFY1Q8IWB7 410 aa13.91□□□□□ -0.18
COL7A1-204ENST00000462475 LSMEM1Q8N8F7 131 aa13.91□□□□□ -0.18
COL7A1-204ENST00000462475 CKAP2Q8WWK9 683 aa13.91□□□□□ -0.18
COL7A1-204ENST00000462475 NEU4Q8WWR8 484 aaPredicted RBP13.91□□□□□ -0.18
COL7A1-204ENST00000462475 ANKRD27Q96NW4 1050 aa13.91□□□□□ -0.18
COL7A1-204ENST00000462475 SNX18Q96RF0 628 aa13.91□□□□□ -0.18
COL7A1-204ENST00000462475 FBXO9Q9UK97 447 aaPredicted RBP13.91□□□□□ -0.18
COL7A1-204ENST00000462475 LOC102725191A0A1B0GVB3 256 aa13.9□□□□□ -0.18
COL7A1-204ENST00000462475 ZNF99A8MXY4 864 aaPredicted RBP13.9□□□□□ -0.18
COL7A1-204ENST00000462475 AKAP8O43823 692 aaKnown RBP13.9□□□□□ -0.18
COL7A1-204ENST00000462475 TPST1O60507 370 aa13.9□□□□□ -0.18
COL7A1-204ENST00000462475 HLA-HP01893 362 aa13.9□□□□□ -0.18
COL7A1-204ENST00000462475 ERCC1P07992 297 aaPredicted RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms