RNA–Protein interactions for RNA: ENST00000462276.1

RTF1-202, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-202ENST00000462276 MEX3DQ86XN8 651 aaKnown RBP9.55□□□□□ -0.88
RTF1-202ENST00000462276 KIF18BQ86Y91 864 aa9.55□□□□□ -0.88
RTF1-202ENST00000462276 TMEM99Q8N816 258 aa9.55□□□□□ -0.88
RTF1-202ENST00000462276 LRRC75AQ8NAA5 344 aa9.55□□□□□ -0.88
RTF1-202ENST00000462276 OR8J1Q8NGP2 316 aa9.55□□□□□ -0.88
RTF1-202ENST00000462276 FNDC8Q8TC99 324 aa9.55□□□□□ -0.88
RTF1-202ENST00000462276 CYGBQ8WWM9 190 aa9.55□□□□□ -0.88
RTF1-202ENST00000462276 WNT2BQ93097 391 aa9.55□□□□□ -0.88
RTF1-202ENST00000462276 ZNF570Q96NI8 536 aa9.55□□□□□ -0.88
RTF1-202ENST00000462276 SNX18Q96RF0 628 aa9.55□□□□□ -0.88
RTF1-202ENST00000462276 IFT27Q9BW83 186 aa9.55□□□□□ -0.88
RTF1-202ENST00000462276 PRRG4Q9BZD6 226 aa9.55□□□□□ -0.88
RTF1-202ENST00000462276 TSPAN10Q9H1Z9 355 aaPredicted RBP9.55□□□□□ -0.88
RTF1-202ENST00000462276 TXNIPQ9H3M7 391 aa9.55□□□□□ -0.88
RTF1-202ENST00000462276 EGLN3Q9H6Z9 239 aa9.55□□□□□ -0.88
RTF1-202ENST00000462276 IMPAD1Q9NX62 359 aa9.55□□□□□ -0.88
RTF1-202ENST00000462276 EMC3Q9P0I2 261 aa9.55□□□□□ -0.88
RTF1-202ENST00000462276 LUZP4Q9P127 313 aa9.55□□□□□ -0.88
RTF1-202ENST00000462276 KLHL9Q9P2J3 617 aa9.55□□□□□ -0.88
RTF1-202ENST00000462276 GRHPRQ9UBQ7 328 aa9.55□□□□□ -0.88
RTF1-202ENST00000462276 CAMK2AQ9UQM7 478 aa9.55□□□□□ -0.88
RTF1-202ENST00000462276 GMPPBQ9Y5P6 360 aa9.55□□□□□ -0.88
RTF1-202ENST00000462276 PRRC2CQ9Y520 2896 aaKnown RBP9.55□□□□□ -0.88
RTF1-202ENST00000462276 ATMQ13315 3056 aa9.54□□□□□ -0.88
RTF1-202ENST00000462276 IGKV3D-15A0A087WSY6 115 aa9.54□□□□□ -0.88
RTF1-202ENST00000462276 CD8B2A6NJW9 211 aa9.54□□□□□ -0.88
RTF1-202ENST00000462276 RIIAD1A6NNX1 92 aa9.54□□□□□ -0.88
RTF1-202ENST00000462276 ZNF724A8MTY0 619 aa9.54□□□□□ -0.88
RTF1-202ENST00000462276 NPIPA2E9PIF3 369 aa9.54□□□□□ -0.88
RTF1-202ENST00000462276 NPIPA3F8WFD2 350 aa9.54□□□□□ -0.88
RTF1-202ENST00000462276 MS4A18H0YCH9 400 aa9.54□□□□□ -0.88
RTF1-202ENST00000462276 BHLHE40O14503 412 aa9.54□□□□□ -0.88
RTF1-202ENST00000462276 PRRG2O14669 202 aa9.54□□□□□ -0.88
RTF1-202ENST00000462276 BCL10O95999 233 aa9.54□□□□□ -0.88
RTF1-202ENST00000462276 NR2C1P13056 603 aa9.54□□□□□ -0.88
RTF1-202ENST00000462276 SDHAP31040 664 aa9.54□□□□□ -0.88
RTF1-202ENST00000462276 POLR2IP36954 125 aaKnown RBP9.54□□□□□ -0.88
RTF1-202ENST00000462276 TDGF1P3P51864 188 aa9.54□□□□□ -0.88
RTF1-202ENST00000462276 FXYD6P3P58550 94 aa9.54□□□□□ -0.88
RTF1-202ENST00000462276 CTXN1P60606 82 aa9.54□□□□□ -0.88
RTF1-202ENST00000462276 RPL27P61353 136 aaKnown RBP9.54□□□□□ -0.88
RTF1-202ENST00000462276 CSNK2BP67870 215 aa9.54□□□□□ -0.88
RTF1-202ENST00000462276 HSF1Q00613 529 aa9.54□□□□□ -0.88
RTF1-202ENST00000462276 MYBPC1Q00872 1141 aa9.54□□□□□ -0.88
RTF1-202ENST00000462276 TEKQ02763 1124 aa9.54□□□□□ -0.88
RTF1-202ENST00000462276 SLC17A1Q14916 467 aa9.54□□□□□ -0.88
RTF1-202ENST00000462276 EIF2S3LQ2VIR3 472 aaKnown RBP9.54□□□□□ -0.88
RTF1-202ENST00000462276 PGGHGQ32M88 737 aa9.54□□□□□ -0.88
RTF1-202ENST00000462276 MS4A18Q3C1V0 323 aa9.54□□□□□ -0.88
RTF1-202ENST00000462276 GXYLT1Q4G148 440 aa9.54□□□□□ -0.88
RTF1-202ENST00000462276 SLC25A30Q5SVS4 291 aa9.54□□□□□ -0.88
RTF1-202ENST00000462276 C12orf73Q69YU5 71 aa9.54□□□□□ -0.88
RTF1-202ENST00000462276 OR2A2Q6IF42 318 aa9.54□□□□□ -0.88
RTF1-202ENST00000462276 PCSK4Q6UW60 755 aa9.54□□□□□ -0.88
RTF1-202ENST00000462276 USP51Q70EK9 711 aa9.54□□□□□ -0.88
RTF1-202ENST00000462276 FCRLAQ7L513 359 aa9.54□□□□□ -0.88
RTF1-202ENST00000462276 ADCK1Q86TW2 530 aa9.54□□□□□ -0.88
RTF1-202ENST00000462276 UEVLDQ8IX04 471 aa9.54□□□□□ -0.88
RTF1-202ENST00000462276 ARIH2OSQ8N7S6 290 aa9.54□□□□□ -0.88
RTF1-202ENST00000462276 MOSPD2Q8NHP6 518 aa9.54□□□□□ -0.88
RTF1-202ENST00000462276 FAM57AQ8TBR7 257 aa9.54□□□□□ -0.88
RTF1-202ENST00000462276 RNF128Q8TEB7 428 aa9.54□□□□□ -0.88
RTF1-202ENST00000462276 INTS12Q96CB8 462 aaKnown RBP9.54□□□□□ -0.88
RTF1-202ENST00000462276 PLEKHA8Q96JA3 519 aa9.54□□□□□ -0.88
RTF1-202ENST00000462276 ADAD1Q96M93 576 aaKnown RBP9.54□□□□□ -0.88
RTF1-202ENST00000462276 Q96MT0 163 aa9.54□□□□□ -0.88
RTF1-202ENST00000462276 POLDIP3Q9BY77 421 aaKnown RBP9.54□□□□□ -0.88
RTF1-202ENST00000462276 SRXN1Q9BYN0 137 aa9.54□□□□□ -0.88
RTF1-202ENST00000462276 ANKRD60Q9BZ19 345 aa9.54□□□□□ -0.88
RTF1-202ENST00000462276 FN3KQ9H479 309 aa9.54□□□□□ -0.88
RTF1-202ENST00000462276 ASF1BQ9NVP2 202 aa9.54□□□□□ -0.88
RTF1-202ENST00000462276 PARPBPQ9NWS1 579 aa9.54□□□□□ -0.88
RTF1-202ENST00000462276 KLHL21Q9UJP4 597 aa9.54□□□□□ -0.88
RTF1-202ENST00000462276 RCE1Q9Y256 329 aa9.54□□□□□ -0.88
RTF1-202ENST00000462276 BOD1L1Q8NFC6 3051 aa9.54□□□□□ -0.88
RTF1-202ENST00000462276 RP1L1Q8IWN7 2480 aaPredicted RBP9.53□□□□□ -0.88
RTF1-202ENST00000462276 OR6C65A6NJZ3 312 aa9.53□□□□□ -0.88
RTF1-202ENST00000462276 SLC22A20A6NK97 555 aa9.53□□□□□ -0.88
RTF1-202ENST00000462276 SNTNA6NMZ2 147 aa9.53□□□□□ -0.88
RTF1-202ENST00000462276 H0YC42 278 aa9.53□□□□□ -0.88
RTF1-202ENST00000462276 XKRYO14609 159 aa9.53□□□□□ -0.88
RTF1-202ENST00000462276 SMAD9O15198 467 aaKnown RBP9.53□□□□□ -0.88
RTF1-202ENST00000462276 CRHP06850 196 aa9.53□□□□□ -0.88
RTF1-202ENST00000462276 PAICSP22234 425 aaKnown RBP9.53□□□□□ -0.88
RTF1-202ENST00000462276 EPHA2P29317 976 aa9.53□□□□□ -0.88
RTF1-202ENST00000462276 PCYT1AP49585 367 aa9.53□□□□□ -0.88
RTF1-202ENST00000462276 TPD52P55327 224 aaPredicted RBP9.53□□□□□ -0.88
RTF1-202ENST00000462276 SNRPGP62308 76 aaKnown RBP9.53□□□□□ -0.88
RTF1-202ENST00000462276 EFNB1P98172 346 aa9.53□□□□□ -0.88
RTF1-202ENST00000462276 RASGEF1BQ0VAM2 473 aa9.53□□□□□ -0.88
RTF1-202ENST00000462276 C19orf57Q0VDD7 668 aa9.53□□□□□ -0.88
RTF1-202ENST00000462276 MED21Q13503 144 aa9.53□□□□□ -0.88
RTF1-202ENST00000462276 LY6DQ14210 128 aa9.53□□□□□ -0.88
RTF1-202ENST00000462276 PON3Q15166 354 aa9.53□□□□□ -0.88
RTF1-202ENST00000462276 SNAPC1Q16533 368 aa9.53□□□□□ -0.88
RTF1-202ENST00000462276 CLEC12AQ5QGZ9 265 aa9.53□□□□□ -0.88
RTF1-202ENST00000462276 C6orf52Q5T4I8 152 aa9.53□□□□□ -0.88
RTF1-202ENST00000462276 ZNF691Q5VV52 312 aa9.53□□□□□ -0.88
RTF1-202ENST00000462276 MEDAGQ5VYS4 303 aa9.53□□□□□ -0.88
RTF1-202ENST00000462276 NSUN5P2Q63ZY6 315 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms