RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 ULBP3Q9BZM4 244 aa4.38□□□□□ -1.71
ATPAF1-203ENST00000460928 SPRY4Q9C004 299 aa4.38□□□□□ -1.71
ATPAF1-203ENST00000460928 SLC22A4Q9H015 551 aa4.38□□□□□ -1.71
ATPAF1-203ENST00000460928 NIPAL2Q9H841 368 aa4.38□□□□□ -1.71
ATPAF1-203ENST00000460928 CXorf21Q9HAI6 301 aa4.38□□□□□ -1.71
ATPAF1-203ENST00000460928 SLC6A13Q9NSD5 602 aa4.38□□□□□ -1.71
ATPAF1-203ENST00000460928 C19orf12Q9NSK7 152 aa4.38□□□□□ -1.71
ATPAF1-203ENST00000460928 DDX28Q9NUL7 540 aaKnown RBP4.38□□□□□ -1.71
ATPAF1-203ENST00000460928 COA4Q9NYJ1 87 aa4.38□□□□□ -1.71
ATPAF1-203ENST00000460928 MRPL15Q9P015 296 aaKnown RBP4.38□□□□□ -1.71
ATPAF1-203ENST00000460928 OPTCQ9UBM4 332 aa4.38□□□□□ -1.71
ATPAF1-203ENST00000460928 PCTPQ9UKL6 214 aa4.38□□□□□ -1.71
ATPAF1-203ENST00000460928 RARRES3Q9UL19 164 aa4.38□□□□□ -1.71
ATPAF1-203ENST00000460928 GAB2Q9UQC2 676 aa4.38□□□□□ -1.71
ATPAF1-203ENST00000460928 RPH3AQ9Y2J0 694 aaPredicted RBP4.38□□□□□ -1.71
ATPAF1-203ENST00000460928 PLLPQ9Y342 182 aa4.38□□□□□ -1.71
ATPAF1-203ENST00000460928 FIS1Q9Y3D6 152 aa4.38□□□□□ -1.71
ATPAF1-203ENST00000460928 A3GALT2U3KPV4 340 aa4.38□□□□□ -1.71
ATPAF1-203ENST00000460928 USP9YO00507 2555 aaPredicted RBP4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 KCNE1BA0A087WTH5 132 aa4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 HYKKA2RU49 373 aa4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 CBY3A6NI87 242 aa4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 TMEM210A6NLX4 147 aa4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 SGK494L7N484 410 aa4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 AIM2O14862 343 aa4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 NDUFS4O43181 175 aa4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 SLC28A2O43868 658 aa4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 CIDEAO60543 219 aa4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 RAD1O60671 282 aa4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 EIF1BO60739 113 aaKnown RBP4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 GLRA3O75311 464 aa4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 RDH16O75452 317 aa4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 PRKRAO75569 313 aaKnown RBP4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 CDC123O75794 336 aaPredicted RBP4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 SUPT7LO94864 414 aa4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 TFP02787 698 aa4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 OPN1LWP04000 364 aa4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 GBAP04062 536 aa4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 FABP1P07148 127 aa4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 RBP1P09455 135 aa4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 MYL2P10916 166 aa4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 PSKH1P11801 424 aa4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 FGF5P12034 268 aa4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 IL7P13232 177 aa4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 PRG2P13727 222 aa4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 ANXA8P13928 327 aa4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 LIFP15018 202 aa4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 BGNP21810 368 aa4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 ATP5F1P24539 256 aaPredicted RBP4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 PTGER1P34995 402 aa4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 EIF1P41567 113 aaKnown RBP4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 RPS5P46782 204 aaKnown RBP4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 CCR8P51685 355 aa4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 PPP5CP53041 499 aa4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 RPS13P62277 151 aaKnown RBP4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 CDKL1Q00532 357 aa4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 IRF8Q02556 426 aa4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 TNK1Q13470 666 aa4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 TRA2AQ13595 282 aaKnown RBP eCLIP4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 RAPSNQ13702 412 aa4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 FGFBP1Q14512 234 aa4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 ZNF273Q14593 569 aa4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 IQCCQ4KMZ1 466 aa4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 DEFB134Q4QY38 66 aa4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 HSD17B12Q53GQ0 312 aa4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 VWA2Q5GFL6 755 aa4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 TOR1AIP1Q5JTV8 583 aa4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 ZNF678Q5SXM1 525 aa4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 DCAF12Q5T6F0 453 aa4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 ANXA8L1Q5VT79 327 aa4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 UBE2UQ5VVX9 321 aa4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 CLEC6AQ6EIG7 209 aa4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 COX15Q7KZN9 410 aa4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 LRRC70Q7Z2Q7 622 aa4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 NOXA1Q86UR1 476 aa4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 HIPK1Q86Z02 1210 aa4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 SLC22A9Q8IVM8 553 aa4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 KLHDC8AQ8IYD2 350 aa4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 MMP21Q8N119 569 aa4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 RAB42Q8N4Z0 105 aa4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 MFSD9Q8NBP5 474 aa4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 SLC37A3Q8NCC5 494 aa4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 TRPV3Q8NET8 790 aa4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 SLC24A4Q8NFF2 622 aa4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 OR4F6Q8NGB9 312 aa4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 OR4K1Q8NGD4 311 aa4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 OR9A4Q8NGU2 314 aa4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 RNASE11Q8TAA1 199 aaKnown RBP4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 RHEBL1Q8TAI7 183 aa4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 SETD6Q8TBK2 473 aa4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 PHF10Q8WUB8 498 aaKnown RBP4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 CT55Q8WUE5 264 aa4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 UBTD2Q8WUN7 234 aa4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 DNAJA4Q8WW22 397 aaPredicted RBP4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 KAT2AQ92830 837 aa4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 MR1Q95460 341 aa4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 CPNE4Q96A23 557 aaPredicted RBP4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 PPWD1Q96BP3 646 aaKnown RBP4.37□□□□□ -1.71
ATPAF1-203ENST00000460928 SGTBQ96EQ0 304 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms