RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 ACSM4P0C7M7 580 aa9.5□□□□□ -0.89
HERC4-207ENST00000460168 CYP4B1P13584 511 aa9.5□□□□□ -0.89
HERC4-207ENST00000460168 MUC1P15941 1255 aaPredicted RBP9.5□□□□□ -0.89
HERC4-207ENST00000460168 ZNF28P17035 718 aa9.5□□□□□ -0.89
HERC4-207ENST00000460168 RPS4Y1P22090 263 aaKnown RBP9.5□□□□□ -0.89
HERC4-207ENST00000460168 FPR3P25089 353 aa9.5□□□□□ -0.89
HERC4-207ENST00000460168 ELAVL4P26378 380 aaKnown RBP9.5□□□□□ -0.89
HERC4-207ENST00000460168 POLR2IP36954 125 aaKnown RBP9.5□□□□□ -0.89
HERC4-207ENST00000460168 LIMS1P48059 325 aa9.5□□□□□ -0.89
HERC4-207ENST00000460168 GPR143P51810 404 aa9.5□□□□□ -0.89
HERC4-207ENST00000460168 MC2RQ01718 297 aa9.5□□□□□ -0.89
HERC4-207ENST00000460168 MRPL2Q5T653 305 aaKnown RBP9.5□□□□□ -0.89
HERC4-207ENST00000460168 MEIOBQ8N635 442 aa9.5□□□□□ -0.89
HERC4-207ENST00000460168 WDSUB1Q8N9V3 476 aa9.5□□□□□ -0.89
HERC4-207ENST00000460168 ZNF721Q8TF20 911 aa9.5□□□□□ -0.89
HERC4-207ENST00000460168 FAM71F1Q96KD3 344 aaPredicted RBP9.5□□□□□ -0.89
HERC4-207ENST00000460168 MUS81Q96NY9 551 aa9.5□□□□□ -0.89
HERC4-207ENST00000460168 STRADBQ9C0K7 418 aa9.5□□□□□ -0.89
HERC4-207ENST00000460168 ING2Q9H160 280 aa9.5□□□□□ -0.89
HERC4-207ENST00000460168 OPA3Q9H6K4 179 aa9.5□□□□□ -0.89
HERC4-207ENST00000460168 TAS2R10Q9NYW0 307 aa9.5□□□□□ -0.89
HERC4-207ENST00000460168 NCDNQ9UBB6 729 aa9.5□□□□□ -0.89
HERC4-207ENST00000460168 PISDQ9UG56 409 aa9.5□□□□□ -0.89
HERC4-207ENST00000460168 WARS2Q9UGM6 360 aaKnown RBP9.5□□□□□ -0.89
HERC4-207ENST00000460168 KCNE5Q9UJ90 142 aa9.5□□□□□ -0.89
HERC4-207ENST00000460168 MGAT4BQ9UQ53 548 aa9.5□□□□□ -0.89
HERC4-207ENST00000460168 C2orf92A0A1B0GVN3 265 aa9.49□□□□□ -0.89
HERC4-207ENST00000460168 CPSF4LA6NMK7 179 aaKnown RBP9.49□□□□□ -0.89
HERC4-207ENST00000460168 PRKNO60260 465 aaPredicted RBP9.49□□□□□ -0.89
HERC4-207ENST00000460168 OR10H3O60404 316 aa9.49□□□□□ -0.89
HERC4-207ENST00000460168 RFPL3O75679 317 aa9.49□□□□□ -0.89
HERC4-207ENST00000460168 SEC14L2O76054 403 aa9.49□□□□□ -0.89
HERC4-207ENST00000460168 IGKV1D-16P01601 117 aa9.49□□□□□ -0.89
HERC4-207ENST00000460168 HOXC5Q00444 222 aa9.49□□□□□ -0.89
HERC4-207ENST00000460168 KCNMB1Q16558 191 aa9.49□□□□□ -0.89
HERC4-207ENST00000460168 DECR1Q16698 335 aa9.49□□□□□ -0.89
HERC4-207ENST00000460168 HFEQ30201 348 aa9.49□□□□□ -0.89
HERC4-207ENST00000460168 HLA-DQA1Q5Y7H0 255 aa9.49□□□□□ -0.89
HERC4-207ENST00000460168 LUZP2Q86TE4 346 aa9.49□□□□□ -0.89
HERC4-207ENST00000460168 C8orf59Q8N0T1 100 aaPredicted RBP9.49□□□□□ -0.89
HERC4-207ENST00000460168 ZNF786Q8N393 782 aa9.49□□□□□ -0.89
HERC4-207ENST00000460168 BCORP1Q8N888 145 aa9.49□□□□□ -0.89
HERC4-207ENST00000460168 AQP11Q8NBQ7 271 aa9.49□□□□□ -0.89
HERC4-207ENST00000460168 KBTBD8Q8NFY9 601 aa9.49□□□□□ -0.89
HERC4-207ENST00000460168 OR1N1Q8NGS0 311 aa9.49□□□□□ -0.89
HERC4-207ENST00000460168 SLC7A13Q8TCU3 470 aa9.49□□□□□ -0.89
HERC4-207ENST00000460168 SNX33Q8WV41 574 aa9.49□□□□□ -0.89
HERC4-207ENST00000460168 GTPBP3Q969Y2 492 aaKnown RBP9.49□□□□□ -0.89
HERC4-207ENST00000460168 PRR14Q9BWN1 585 aa9.49□□□□□ -0.89
HERC4-207ENST00000460168 ANKRD19PQ9H560 264 aa9.49□□□□□ -0.89
HERC4-207ENST00000460168 POLR1BQ9H9Y6 1135 aa9.49□□□□□ -0.89
HERC4-207ENST00000460168 PPP4R1LQ9P1A2 415 aa9.49□□□□□ -0.89
HERC4-207ENST00000460168 PURGQ9UJV8 347 aaKnown RBP9.49□□□□□ -0.89
HERC4-207ENST00000460168 KIF26BQ2KJY2 2108 aa9.49□□□□□ -0.89
HERC4-207ENST00000460168 IGHV3-20A0A0C4DH32 117 aa9.48□□□□□ -0.89
HERC4-207ENST00000460168 CDHR4A6H8M9 788 aa9.48□□□□□ -0.89
HERC4-207ENST00000460168 B4E171 279 aa9.48□□□□□ -0.89
HERC4-207ENST00000460168 PHYHO14832 338 aa9.48□□□□□ -0.89
HERC4-207ENST00000460168 BCKDKO14874 412 aa9.48□□□□□ -0.89
HERC4-207ENST00000460168 AKR7A2O43488 359 aa9.48□□□□□ -0.89
HERC4-207ENST00000460168 UGT2B11O75310 529 aa9.48□□□□□ -0.89
HERC4-207ENST00000460168 ALOX12BO75342 701 aa9.48□□□□□ -0.89
HERC4-207ENST00000460168 AHCYP23526 432 aa9.48□□□□□ -0.89
HERC4-207ENST00000460168 PPICP45877 212 aa9.48□□□□□ -0.89
HERC4-207ENST00000460168 RPS5P46782 204 aaKnown RBP9.48□□□□□ -0.89
HERC4-207ENST00000460168 EMP2P54851 167 aa9.48□□□□□ -0.89
HERC4-207ENST00000460168 UGT2B15P54855 530 aa9.48□□□□□ -0.89
HERC4-207ENST00000460168 SOX8P57073 446 aa9.48□□□□□ -0.89
HERC4-207ENST00000460168 E2F1Q01094 437 aa9.48□□□□□ -0.89
HERC4-207ENST00000460168 FGL1Q08830 312 aa9.48□□□□□ -0.89
HERC4-207ENST00000460168 DGCR6Q14129 220 aa9.48□□□□□ -0.89
HERC4-207ENST00000460168 CRTC2Q53ET0 693 aaPredicted RBP9.48□□□□□ -0.89
HERC4-207ENST00000460168 ENTPD8Q5MY95 495 aa9.48□□□□□ -0.89
HERC4-207ENST00000460168 TMEM164Q5U3C3 297 aa9.48□□□□□ -0.89
HERC4-207ENST00000460168 LCN10Q6JVE6 187 aa9.48□□□□□ -0.89
HERC4-207ENST00000460168 PTCHD4Q6ZW05 846 aa9.48□□□□□ -0.89
HERC4-207ENST00000460168 SLC29A4Q7RTT9 530 aa9.48□□□□□ -0.89
HERC4-207ENST00000460168 DCXRQ7Z4W1 244 aa9.48□□□□□ -0.89
HERC4-207ENST00000460168 RANBP3LQ86VV4 465 aaPredicted RBP9.48□□□□□ -0.89
HERC4-207ENST00000460168 OR5M1Q8NGP8 315 aa9.48□□□□□ -0.89
HERC4-207ENST00000460168 MR1Q95460 341 aa9.48□□□□□ -0.89
HERC4-207ENST00000460168 LCORQ96JN0 433 aaPredicted RBP9.48□□□□□ -0.89
HERC4-207ENST00000460168 MCHR1Q99705 422 aa9.48□□□□□ -0.89
HERC4-207ENST00000460168 NIPSNAP1Q9BPW8 284 aa9.48□□□□□ -0.89
HERC4-207ENST00000460168 CRB3Q9BUF7 120 aa9.48□□□□□ -0.89
HERC4-207ENST00000460168 NUDT9Q9BW91 350 aa9.48□□□□□ -0.89
HERC4-207ENST00000460168 HDHD5Q9BXW7 423 aa9.48□□□□□ -0.89
HERC4-207ENST00000460168 NXF5Q9H1B4 397 aaKnown RBP9.48□□□□□ -0.89
HERC4-207ENST00000460168 AKIRIN1Q9H9L7 192 aaPredicted RBP9.48□□□□□ -0.89
HERC4-207ENST00000460168 POFUT2Q9Y2G5 429 aa9.48□□□□□ -0.89
HERC4-207ENST00000460168 LOXL2Q9Y4K0 774 aa9.48□□□□□ -0.89
HERC4-207ENST00000460168 ARRDC5A6NEK1 342 aa9.48□□□□□ -0.89
HERC4-207ENST00000460168 TUBAL3A6NHL2 446 aa9.48□□□□□ -0.89
HERC4-207ENST00000460168 VSTM2BA6NLU5 285 aa9.48□□□□□ -0.89
HERC4-207ENST00000460168 FAAHO00519 579 aa9.48□□□□□ -0.89
HERC4-207ENST00000460168 ONECUT2O95948 504 aa9.48□□□□□ -0.89
HERC4-207ENST00000460168 SERPINA5P05154 406 aa9.48□□□□□ -0.89
HERC4-207ENST00000460168 LINC00614P0C842 121 aa9.48□□□□□ -0.89
HERC4-207ENST00000460168 GKN3PP0CG01 181 aa9.48□□□□□ -0.89
HERC4-207ENST00000460168 ITGAMP11215 1152 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 113.7 ms