RNA–Protein interactions for RNA: ENST00000460050.1

THBS3-204, Transcript of thrombospondin 3, humanhuman

TSL 5

Gene THBS3, Length 879 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-204ENST00000460050 PIGWQ7Z7B1 504 aa12.52□□□□□ -0.41
THBS3-204ENST00000460050 C17orf78Q8N4C9 275 aa12.52□□□□□ -0.41
THBS3-204ENST00000460050 AKAP1Q92667 903 aaKnown RBP eCLIP12.52□□□□□ -0.41
THBS3-204ENST00000460050 PIGTQ969N2 578 aa12.52□□□□□ -0.41
THBS3-204ENST00000460050 PRSS27Q9BQR3 290 aa12.52□□□□□ -0.41
THBS3-204ENST00000460050 ZNF426Q9BUY5 554 aa12.52□□□□□ -0.41
THBS3-204ENST00000460050 LINC00470Q9BZP3 86 aa12.52□□□□□ -0.41
THBS3-204ENST00000460050 POLR2J2Q9GZM3 115 aaKnown RBP12.52□□□□□ -0.41
THBS3-204ENST00000460050 POLR2J3Q9H1A7 115 aaKnown RBP12.52□□□□□ -0.41
THBS3-204ENST00000460050 ARL2BPQ9Y2Y0 163 aa12.52□□□□□ -0.41
THBS3-204ENST00000460050 VPS13CQ709C8 3753 aa12.51□□□□□ -0.41
THBS3-204ENST00000460050 PLPP3O14495 311 aa12.51□□□□□ -0.41
THBS3-204ENST00000460050 NDUFAB1O14561 156 aa12.51□□□□□ -0.41
THBS3-204ENST00000460050 GSTA4O15217 222 aa12.51□□□□□ -0.41
THBS3-204ENST00000460050 AKAP8O43823 692 aaKnown RBP12.51□□□□□ -0.41
THBS3-204ENST00000460050 SLC43A1O75387 559 aa12.51□□□□□ -0.41
THBS3-204ENST00000460050 ZNF432O94892 652 aa12.51□□□□□ -0.41
THBS3-204ENST00000460050 OR5F1O95221 314 aa12.51□□□□□ -0.41
THBS3-204ENST00000460050 CH25HO95992 272 aa12.51□□□□□ -0.41
THBS3-204ENST00000460050 HOXC12P31275 282 aa12.51□□□□□ -0.41
THBS3-204ENST00000460050 ZNF83P51522 516 aa12.51□□□□□ -0.41
THBS3-204ENST00000460050 SELENOWP63302 87 aa12.51□□□□□ -0.41
THBS3-204ENST00000460050 SLC25A3Q00325 362 aa12.51□□□□□ -0.41
THBS3-204ENST00000460050 POU3F1Q03052 451 aaPredicted RBP12.51□□□□□ -0.41
THBS3-204ENST00000460050 ZNF74Q16587 644 aa12.51□□□□□ -0.41
THBS3-204ENST00000460050 ADAM5Q6NVV9 412 aa12.51□□□□□ -0.41
THBS3-204ENST00000460050 ZNF611Q8N823 705 aa12.51□□□□□ -0.41
THBS3-204ENST00000460050 WDR31Q8NA23 367 aa12.51□□□□□ -0.41
THBS3-204ENST00000460050 KBTBD8Q8NFY9 601 aa12.51□□□□□ -0.41
THBS3-204ENST00000460050 OR5J2Q8NH18 312 aa12.51□□□□□ -0.41
THBS3-204ENST00000460050 LILRB1Q8NHL6 650 aaPredicted RBP12.51□□□□□ -0.41
THBS3-204ENST00000460050 LZICQ8WZA0 190 aa12.51□□□□□ -0.41
THBS3-204ENST00000460050 NEUROG1Q92886 237 aa12.51□□□□□ -0.41
THBS3-204ENST00000460050 OR2M2Q96R28 347 aa12.51□□□□□ -0.41
THBS3-204ENST00000460050 KCTD14Q9BQ13 255 aaPredicted RBP12.51□□□□□ -0.41
THBS3-204ENST00000460050 SLC19A3Q9BZV2 496 aa12.51□□□□□ -0.41
THBS3-204ENST00000460050 HEATR1Q9H583 2144 aaKnown RBP12.51□□□□□ -0.41
THBS3-204ENST00000460050 MEPEQ9NQ76 525 aaPredicted RBP12.51□□□□□ -0.41
THBS3-204ENST00000460050 SLC17A5Q9NRA2 495 aa12.51□□□□□ -0.41
THBS3-204ENST00000460050 ABCD2Q9UBJ2 740 aa12.51□□□□□ -0.41
THBS3-204ENST00000460050 RIMS3Q9UJD0 308 aa12.51□□□□□ -0.41
THBS3-204ENST00000460050 AMDHD2Q9Y303 409 aa12.51□□□□□ -0.41
THBS3-204ENST00000460050 NOX1Q9Y5S8 564 aa12.51□□□□□ -0.41
THBS3-204ENST00000460050 ABCD4O14678 606 aa12.5□□□□□ -0.41
THBS3-204ENST00000460050 SERPINI2O75830 405 aa12.5□□□□□ -0.41
THBS3-204ENST00000460050 ZNF682O95780 498 aa12.5□□□□□ -0.41
THBS3-204ENST00000460050 ADORA3P0DMS8 318 aa12.5□□□□□ -0.41
THBS3-204ENST00000460050 ROR2Q01974 943 aaKnown RBP12.5□□□□□ -0.41
THBS3-204ENST00000460050 PIN1Q13526 163 aaPredicted RBP12.5□□□□□ -0.41
THBS3-204ENST00000460050 HIKESHIQ53FT3 197 aa12.5□□□□□ -0.41
THBS3-204ENST00000460050 HMBOX1Q6NT76 420 aa12.5□□□□□ -0.41
THBS3-204ENST00000460050 KLHL17Q6TDP4 642 aa12.5□□□□□ -0.41
THBS3-204ENST00000460050 KLHL24Q6TFL4 600 aa12.5□□□□□ -0.41
THBS3-204ENST00000460050 VTCN1Q7Z7D3 282 aa12.5□□□□□ -0.41
THBS3-204ENST00000460050 NKAIN4Q8IVV8 208 aa12.5□□□□□ -0.41
THBS3-204ENST00000460050 TMEM123Q8N131 208 aa12.5□□□□□ -0.41
THBS3-204ENST00000460050 GPR137CQ8N3F9 429 aa12.5□□□□□ -0.41
THBS3-204ENST00000460050 PIK3C3Q8NEB9 887 aa12.5□□□□□ -0.41
THBS3-204ENST00000460050 PIP5K1AQ99755 562 aa12.5□□□□□ -0.41
THBS3-204ENST00000460050 EMC6Q9BV81 110 aa12.5□□□□□ -0.41
THBS3-204ENST00000460050 C1QTNF6Q9BXI9 259 aa12.5□□□□□ -0.41
THBS3-204ENST00000460050 FKRPQ9H9S5 495 aa12.5□□□□□ -0.41
THBS3-204ENST00000460050 SPAG4Q9NPE6 437 aa12.5□□□□□ -0.41
THBS3-204ENST00000460050 NANSQ9NR45 359 aa12.5□□□□□ -0.41
THBS3-204ENST00000460050 MED29Q9NX70 200 aa12.5□□□□□ -0.41
THBS3-204ENST00000460050 C11orf98E9PRG8 122 aa12.49□□□□□ -0.41
THBS3-204ENST00000460050 M0R1B8 84 aa12.49□□□□□ -0.41
THBS3-204ENST00000460050 SMPD2O60906 423 aa12.49□□□□□ -0.41
THBS3-204ENST00000460050 DCTN3O75935 186 aa12.49□□□□□ -0.41
THBS3-204ENST00000460050 OR6A2O95222 327 aa12.49□□□□□ -0.41
THBS3-204ENST00000460050 THRBP10828 461 aa12.49□□□□□ -0.41
THBS3-204ENST00000460050 UMPSP11172 480 aa12.49□□□□□ -0.41
THBS3-204ENST00000460050 NCK1P16333 377 aa12.49□□□□□ -0.41
THBS3-204ENST00000460050 AHCYP23526 432 aa12.49□□□□□ -0.41
THBS3-204ENST00000460050 PTAFRP25105 342 aa12.49□□□□□ -0.41
THBS3-204ENST00000460050 RBM34P42696 430 aaKnown RBP12.49□□□□□ -0.41
THBS3-204ENST00000460050 UGT2B15P54855 530 aa12.49□□□□□ -0.41
THBS3-204ENST00000460050 PRPS1P60891 318 aa12.49□□□□□ -0.41
THBS3-204ENST00000460050 FOXD4Q12950 439 aaPredicted RBP12.49□□□□□ -0.41
THBS3-204ENST00000460050 TBRG1Q3YBR2 411 aa12.49□□□□□ -0.41
THBS3-204ENST00000460050 ZNF672Q499Z4 452 aaPredicted RBP12.49□□□□□ -0.41
THBS3-204ENST00000460050 CARD17Q5XLA6 110 aa12.49□□□□□ -0.41
THBS3-204ENST00000460050 TMEM108Q6UXF1 575 aa12.49□□□□□ -0.41
THBS3-204ENST00000460050 NHLRC1Q6VVB1 395 aa12.49□□□□□ -0.41
THBS3-204ENST00000460050 SLC46A3Q7Z3Q1 461 aa12.49□□□□□ -0.41
THBS3-204ENST00000460050 PXKQ7Z7A4 578 aa12.49□□□□□ -0.41
THBS3-204ENST00000460050 TGIF2LYQ8IUE0 185 aa12.49□□□□□ -0.41
THBS3-204ENST00000460050 LRRC17Q8N6Y2 441 aa12.49□□□□□ -0.41
THBS3-204ENST00000460050 OR1K1Q8NGR3 316 aa12.49□□□□□ -0.41
THBS3-204ENST00000460050 PFN4Q8NHR9 129 aa12.49□□□□□ -0.41
THBS3-204ENST00000460050 TMEM255BQ8WV15 326 aa12.49□□□□□ -0.41
THBS3-204ENST00000460050 IGFBPL1Q8WX77 278 aa12.49□□□□□ -0.41
THBS3-204ENST00000460050 GEMIN6Q8WXD5 167 aaKnown RBP12.49□□□□□ -0.41
THBS3-204ENST00000460050 FBXW5Q969U6 566 aa12.49□□□□□ -0.41
THBS3-204ENST00000460050 FAM162AQ96A26 154 aa12.49□□□□□ -0.41
THBS3-204ENST00000460050 BOD1Q96IK1 185 aa12.49□□□□□ -0.41
THBS3-204ENST00000460050 TXNDC15Q96J42 360 aa12.49□□□□□ -0.41
THBS3-204ENST00000460050 PRRC1Q96M27 445 aa12.49□□□□□ -0.41
THBS3-204ENST00000460050 LRRC37BQ96QE4 947 aa12.49□□□□□ -0.41
THBS3-204ENST00000460050 ADA2Q9NZK5 511 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms