RNA–Protein interactions for RNA: ENST00000457924.2

UPF3AP2-201, Transcript of UPF3A pseudogene 2, humanhuman

BASIC

Gene UPF3AP2, Length 1,132 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP2-201ENST00000457924 CASP8Q14790 479 aa12.36□□□□□ -0.43
UPF3AP2-201ENST00000457924 DPY19L1Q2PZI1 675 aa12.36□□□□□ -0.43
UPF3AP2-201ENST00000457924 SLC9B1Q4ZJI4 515 aa12.36□□□□□ -0.43
UPF3AP2-201ENST00000457924 WBP2NLQ6ICG8 309 aa12.36□□□□□ -0.43
UPF3AP2-201ENST00000457924 PEG10Q86TG7 708 aaKnown RBP12.36□□□□□ -0.43
UPF3AP2-201ENST00000457924 CCDC36Q8IYA8 594 aa12.36□□□□□ -0.43
UPF3AP2-201ENST00000457924 TEX29Q8N6K0 151 aa12.36□□□□□ -0.43
UPF3AP2-201ENST00000457924 TRIML2Q8N7C3 387 aa12.36□□□□□ -0.43
UPF3AP2-201ENST00000457924 TCP10LQ8TDR4 215 aa12.36□□□□□ -0.43
UPF3AP2-201ENST00000457924 PPP1R36Q96LQ0 422 aa12.36□□□□□ -0.43
UPF3AP2-201ENST00000457924 JMJD8Q96S16 334 aa12.36□□□□□ -0.43
UPF3AP2-201ENST00000457924 RBM4Q9BWF3 364 aaKnown RBP12.36□□□□□ -0.43
UPF3AP2-201ENST00000457924 MS4A5Q9H3V2 200 aa12.36□□□□□ -0.43
UPF3AP2-201ENST00000457924 AKTIPQ9H8T0 292 aa12.36□□□□□ -0.43
UPF3AP2-201ENST00000457924 NOX3Q9HBY0 568 aa12.36□□□□□ -0.43
UPF3AP2-201ENST00000457924 RLIMQ9NVW2 624 aa12.36□□□□□ -0.43
UPF3AP2-201ENST00000457924 USP22Q9UPT9 525 aa12.36□□□□□ -0.43
UPF3AP2-201ENST00000457924 RCE1Q9Y256 329 aa12.36□□□□□ -0.43
UPF3AP2-201ENST00000457924 TENM1Q9UKZ4 2725 aa12.36□□□□□ -0.43
UPF3AP2-201ENST00000457924 A0A096LPI6 279 aa12.35□□□□□ -0.43
UPF3AP2-201ENST00000457924 TLDC2A0PJX2 215 aa12.35□□□□□ -0.43
UPF3AP2-201ENST00000457924 CDHR4A6H8M9 788 aa12.35□□□□□ -0.43
UPF3AP2-201ENST00000457924 SYNGR3O43761 229 aa12.35□□□□□ -0.43
UPF3AP2-201ENST00000457924 SLC43A1O75387 559 aa12.35□□□□□ -0.43
UPF3AP2-201ENST00000457924 SPAG7O75391 227 aa12.35□□□□□ -0.43
UPF3AP2-201ENST00000457924 AHSA1O95433 338 aa12.35□□□□□ -0.43
UPF3AP2-201ENST00000457924 C1QCP02747 245 aa12.35□□□□□ -0.43
UPF3AP2-201ENST00000457924 NUDT17P0C025 328 aa12.35□□□□□ -0.43
UPF3AP2-201ENST00000457924 CREB1P16220 341 aa12.35□□□□□ -0.43
UPF3AP2-201ENST00000457924 ACHEP22303 614 aa12.35□□□□□ -0.43
UPF3AP2-201ENST00000457924 NR4A1P22736 598 aa12.35□□□□□ -0.43
UPF3AP2-201ENST00000457924 GTF2E2P29084 291 aaKnown RBP12.35□□□□□ -0.43
UPF3AP2-201ENST00000457924 EVX1P49640 407 aa12.35□□□□□ -0.43
UPF3AP2-201ENST00000457924 CLNS1AP54105 237 aaKnown RBP12.35□□□□□ -0.43
UPF3AP2-201ENST00000457924 HILS1P60008 231 aa12.35□□□□□ -0.43
UPF3AP2-201ENST00000457924 PDCD2Q16342 344 aaPredicted RBP12.35□□□□□ -0.43
UPF3AP2-201ENST00000457924 SPANXN4Q5MJ08 99 aa12.35□□□□□ -0.43
UPF3AP2-201ENST00000457924 ELFN2Q5R3F8 820 aa12.35□□□□□ -0.43
UPF3AP2-201ENST00000457924 REP15Q6BDI9 236 aa12.35□□□□□ -0.43
UPF3AP2-201ENST00000457924 USP43Q70EL4 1123 aa12.35□□□□□ -0.43
UPF3AP2-201ENST00000457924 MDP1Q86V88 176 aa12.35□□□□□ -0.43
UPF3AP2-201ENST00000457924 KDM8Q8N371 416 aa12.35□□□□□ -0.43
UPF3AP2-201ENST00000457924 GPR137CQ8N3F9 429 aa12.35□□□□□ -0.43
UPF3AP2-201ENST00000457924 OR51F2Q8NH61 342 aa12.35□□□□□ -0.43
UPF3AP2-201ENST00000457924 RDH5Q92781 318 aa12.35□□□□□ -0.43
UPF3AP2-201ENST00000457924 MRPL24Q96A35 216 aaKnown RBP12.35□□□□□ -0.43
UPF3AP2-201ENST00000457924 SLC25A36Q96CQ1 311 aa12.35□□□□□ -0.43
UPF3AP2-201ENST00000457924 LRRC37BQ96QE4 947 aa12.35□□□□□ -0.43
UPF3AP2-201ENST00000457924 GPR35Q9HC97 309 aa12.35□□□□□ -0.43
UPF3AP2-201ENST00000457924 ZNF503-AS2A6NEH8 195 aa12.34□□□□□ -0.43
UPF3AP2-201ENST00000457924 GAAP10253 952 aa12.34□□□□□ -0.43
UPF3AP2-201ENST00000457924 PNMTP11086 282 aa12.34□□□□□ -0.43
UPF3AP2-201ENST00000457924 NCF2P19878 526 aaPredicted RBP12.34□□□□□ -0.43
UPF3AP2-201ENST00000457924 EPHA1P21709 976 aa12.34□□□□□ -0.43
UPF3AP2-201ENST00000457924 COL8A2P25067 703 aa12.34□□□□□ -0.43
UPF3AP2-201ENST00000457924 S100A3P33764 101 aa12.34□□□□□ -0.43
UPF3AP2-201ENST00000457924 ACAA2P42765 397 aaKnown RBP12.34□□□□□ -0.43
UPF3AP2-201ENST00000457924 LIMS1P48059 325 aa12.34□□□□□ -0.43
UPF3AP2-201ENST00000457924 CEACAM16Q2WEN9 425 aa12.34□□□□□ -0.43
UPF3AP2-201ENST00000457924 LIN52Q52LA3 116 aa12.34□□□□□ -0.43
UPF3AP2-201ENST00000457924 FAHD2BQ6P2I3 314 aaPredicted RBP12.34□□□□□ -0.43
UPF3AP2-201ENST00000457924 OR52P1PQ8NH57 321 aa12.34□□□□□ -0.43
UPF3AP2-201ENST00000457924 MFSD8Q8NHS3 518 aa12.34□□□□□ -0.43
UPF3AP2-201ENST00000457924 STK35Q8TDR2 534 aa12.34□□□□□ -0.43
UPF3AP2-201ENST00000457924 FAHD2AQ96GK7 314 aa12.34□□□□□ -0.43
UPF3AP2-201ENST00000457924 CCDC115Q96NT0 180 aa12.34□□□□□ -0.43
UPF3AP2-201ENST00000457924 PANX1Q96RD7 426 aa12.34□□□□□ -0.43
UPF3AP2-201ENST00000457924 MRPL37Q9BZE1 423 aaKnown RBP12.34□□□□□ -0.43
UPF3AP2-201ENST00000457924 TREM2Q9NZC2 230 aa12.34□□□□□ -0.43
UPF3AP2-201ENST00000457924 BTNL2Q9UIR0 455 aa12.34□□□□□ -0.43
UPF3AP2-201ENST00000457924 NOX1Q9Y5S8 564 aa12.34□□□□□ -0.43
UPF3AP2-201ENST00000457924 TRAV20A0A0B4J274 112 aa12.33□□□□□ -0.44
UPF3AP2-201ENST00000457924 CCDC154A6NI56 674 aa12.33□□□□□ -0.44
UPF3AP2-201ENST00000457924 ZNF99A8MXY4 864 aaPredicted RBP12.33□□□□□ -0.44
UPF3AP2-201ENST00000457924 E9PBE3 544 aa12.33□□□□□ -0.44
UPF3AP2-201ENST00000457924 NPIPB7O75200 414 aa12.33□□□□□ -0.44
UPF3AP2-201ENST00000457924 ZNF432O94892 652 aa12.33□□□□□ -0.44
UPF3AP2-201ENST00000457924 PNPP00491 289 aa12.33□□□□□ -0.44
UPF3AP2-201ENST00000457924 HPXP02790 462 aa12.33□□□□□ -0.44
UPF3AP2-201ENST00000457924 TCN1P20061 433 aaPredicted RBP12.33□□□□□ -0.44
UPF3AP2-201ENST00000457924 TMEM33P57088 247 aa12.33□□□□□ -0.44
UPF3AP2-201ENST00000457924 C1DQ13901 141 aaKnown RBP12.33□□□□□ -0.44
UPF3AP2-201ENST00000457924 ZNF311Q5JNZ3 666 aa12.33□□□□□ -0.44
UPF3AP2-201ENST00000457924 ATG16L1Q676U5 607 aa12.33□□□□□ -0.44
UPF3AP2-201ENST00000457924 ZNF836Q6ZNA1 936 aa12.33□□□□□ -0.44
UPF3AP2-201ENST00000457924 CARM1Q86X55 608 aa12.33□□□□□ -0.44
UPF3AP2-201ENST00000457924 VRK2Q86Y07 508 aa12.33□□□□□ -0.44
UPF3AP2-201ENST00000457924 PIK3C3Q8NEB9 887 aa12.33□□□□□ -0.44
UPF3AP2-201ENST00000457924 OXGR1Q96P68 337 aa12.33□□□□□ -0.44
UPF3AP2-201ENST00000457924 SYT3Q9BQG1 590 aa12.33□□□□□ -0.44
UPF3AP2-201ENST00000457924 RACGAP1Q9H0H5 632 aa12.33□□□□□ -0.44
UPF3AP2-201ENST00000457924 ZNF275Q9NSD4 429 aaPredicted RBP12.33□□□□□ -0.44
UPF3AP2-201ENST00000457924 MGAM2Q2M2H8 2515 aa12.32□□□□□ -0.44
UPF3AP2-201ENST00000457924 FTCDNL1E5RQL4 147 aa12.32□□□□□ -0.44
UPF3AP2-201ENST00000457924 PPIHO43447 177 aaKnown RBP12.32□□□□□ -0.44
UPF3AP2-201ENST00000457924 AKAP8O43823 692 aaKnown RBP12.32□□□□□ -0.44
UPF3AP2-201ENST00000457924 RPLP1P05386 114 aaKnown RBP12.32□□□□□ -0.44
UPF3AP2-201ENST00000457924 GSNP06396 782 aa12.32□□□□□ -0.44
UPF3AP2-201ENST00000457924 BPGMP07738 259 aa12.32□□□□□ -0.44
UPF3AP2-201ENST00000457924 ANPEPP15144 967 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms