RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 SULT1C2O00338 296 aa9.43□□□□□ -0.9
CLIP4-208ENST00000456385 CCSO14618 274 aa9.43□□□□□ -0.9
CLIP4-208ENST00000456385 PAK4O96013 591 aaPredicted RBP9.43□□□□□ -0.9
CLIP4-208ENST00000456385 SOD2P04179 222 aa9.43□□□□□ -0.9
CLIP4-208ENST00000456385 CALCBP10092 127 aa9.43□□□□□ -0.9
CLIP4-208ENST00000456385 SELPP16109 830 aa9.43□□□□□ -0.9
CLIP4-208ENST00000456385 PRMT2P55345 433 aa9.43□□□□□ -0.9
CLIP4-208ENST00000456385 PLAURQ03405 335 aa9.43□□□□□ -0.9
CLIP4-208ENST00000456385 PRKCZQ05513 592 aa9.43□□□□□ -0.9
CLIP4-208ENST00000456385 PRDX1Q06830 199 aaKnown RBP9.43□□□□□ -0.9
CLIP4-208ENST00000456385 ILF3Q12906 894 aaKnown RBP eCLIP9.43□□□□□ -0.9
CLIP4-208ENST00000456385 DUSP8Q13202 625 aa9.43□□□□□ -0.9
CLIP4-208ENST00000456385 RAB33AQ14088 237 aa9.43□□□□□ -0.9
CLIP4-208ENST00000456385 ARHGAP19Q14CB8 494 aa9.43□□□□□ -0.9
CLIP4-208ENST00000456385 TAF13Q15543 124 aa9.43□□□□□ -0.9
CLIP4-208ENST00000456385 MPPED2Q15777 294 aa9.43□□□□□ -0.9
CLIP4-208ENST00000456385 GXYLT1Q4G148 440 aa9.43□□□□□ -0.9
CLIP4-208ENST00000456385 LY6G5CQ5SRR4 150 aa9.43□□□□□ -0.9
CLIP4-208ENST00000456385 RPL13AP3Q6NVV1 102 aa9.43□□□□□ -0.9
CLIP4-208ENST00000456385 TMEM71Q6P5X7 295 aa9.43□□□□□ -0.9
CLIP4-208ENST00000456385 BIVMQ86UB2 503 aa9.43□□□□□ -0.9
CLIP4-208ENST00000456385 SHISA5Q8N114 240 aa9.43□□□□□ -0.9
CLIP4-208ENST00000456385 C12orf45Q8N5I9 185 aaPredicted RBP9.43□□□□□ -0.9
CLIP4-208ENST00000456385 OR1M1Q8NGA1 313 aa9.43□□□□□ -0.9
CLIP4-208ENST00000456385 OR2A1Q8NGT9 310 aa9.43□□□□□ -0.9
CLIP4-208ENST00000456385 THAP6Q8TBB0 222 aa9.43□□□□□ -0.9
CLIP4-208ENST00000456385 GLYATL2Q8WU03 294 aa9.43□□□□□ -0.9
CLIP4-208ENST00000456385 SEC22AQ96IW7 307 aa9.43□□□□□ -0.9
CLIP4-208ENST00000456385 ZNF514Q96K75 400 aaPredicted RBP9.43□□□□□ -0.9
CLIP4-208ENST00000456385 Q96M85 177 aa9.43□□□□□ -0.9
CLIP4-208ENST00000456385 CRB3Q9BUF7 120 aa9.43□□□□□ -0.9
CLIP4-208ENST00000456385 LGR4Q9BXB1 951 aa9.43□□□□□ -0.9
CLIP4-208ENST00000456385 TLNRD1Q9H1K6 362 aa9.43□□□□□ -0.9
CLIP4-208ENST00000456385 TCF7L1Q9HCS4 588 aa9.43□□□□□ -0.9
CLIP4-208ENST00000456385 OBSL1O75147 1896 aa9.43□□□□□ -0.9
CLIP4-208ENST00000456385 SPTBP11277 2137 aa9.43□□□□□ -0.9
CLIP4-208ENST00000456385 CDH23Q9H251 3354 aa9.43□□□□□ -0.9
CLIP4-208ENST00000456385 TRAV8-7A0A075B6U6 113 aa9.43□□□□□ -0.9
CLIP4-208ENST00000456385 XRCC3O43542 346 aa9.43□□□□□ -0.9
CLIP4-208ENST00000456385 NARSO43776 548 aaKnown RBP9.43□□□□□ -0.9
CLIP4-208ENST00000456385 ACTL6AO96019 429 aa9.43□□□□□ -0.9
CLIP4-208ENST00000456385 IFNGP01579 166 aa9.43□□□□□ -0.9
CLIP4-208ENST00000456385 ACAA1P09110 424 aaPredicted RBP9.43□□□□□ -0.9
CLIP4-208ENST00000456385 OR4E1P0C645 316 aa9.43□□□□□ -0.9
CLIP4-208ENST00000456385 CST5P28325 142 aaPredicted RBP9.43□□□□□ -0.9
CLIP4-208ENST00000456385 CCR2P41597 374 aa9.43□□□□□ -0.9
CLIP4-208ENST00000456385 NTHL1P78549 312 aa9.43□□□□□ -0.9
CLIP4-208ENST00000456385 HTRA4P83105 476 aaPredicted RBP9.43□□□□□ -0.9
CLIP4-208ENST00000456385 SNTB1Q13884 538 aaKnown RBP9.43□□□□□ -0.9
CLIP4-208ENST00000456385 SMAD2Q15796 467 aaKnown RBP9.43□□□□□ -0.9
CLIP4-208ENST00000456385 ZIC1Q15915 447 aa9.43□□□□□ -0.9
CLIP4-208ENST00000456385 SWI5Q1ZZU3 235 aa9.43□□□□□ -0.9
CLIP4-208ENST00000456385 MICBQ29980 383 aa9.43□□□□□ -0.9
CLIP4-208ENST00000456385 ODF4Q2M2E3 257 aa9.43□□□□□ -0.9
CLIP4-208ENST00000456385 ARHGAP11BQ3KRB8 267 aa9.43□□□□□ -0.9
CLIP4-208ENST00000456385 TMEM35AQ53FP2 167 aa9.43□□□□□ -0.9
CLIP4-208ENST00000456385 PAN3Q58A45 887 aaKnown RBP9.43□□□□□ -0.9
CLIP4-208ENST00000456385 FIGNL1Q6PIW4 674 aa9.43□□□□□ -0.9
CLIP4-208ENST00000456385 NDUFAF7Q7L592 441 aa9.43□□□□□ -0.9
CLIP4-208ENST00000456385 SLC16A13Q7RTY0 426 aa9.43□□□□□ -0.9
CLIP4-208ENST00000456385 KRT77Q7Z794 578 aa9.43□□□□□ -0.9
CLIP4-208ENST00000456385 KCNRGQ8N5I3 272 aa9.43□□□□□ -0.9
CLIP4-208ENST00000456385 STEAP2Q8NFT2 490 aa9.43□□□□□ -0.9
CLIP4-208ENST00000456385 IRF7Q92985 503 aa9.43□□□□□ -0.9
CLIP4-208ENST00000456385 HSPA12BQ96MM6 686 aa9.43□□□□□ -0.9
CLIP4-208ENST00000456385 PTCHD1Q96NR3 888 aa9.43□□□□□ -0.9
CLIP4-208ENST00000456385 NMNAT3Q96T66 252 aa9.43□□□□□ -0.9
CLIP4-208ENST00000456385 PCBD2Q9H0N5 130 aa9.43□□□□□ -0.9
CLIP4-208ENST00000456385 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.43□□□□□ -0.9
CLIP4-208ENST00000456385 IER3IP1Q9Y5U9 82 aa9.43□□□□□ -0.9
CLIP4-208ENST00000456385 A0A0D9SG52 128 aa9.42□□□□□ -0.9
CLIP4-208ENST00000456385 MEX3AA1L020 520 aaKnown RBP9.42□□□□□ -0.9
CLIP4-208ENST00000456385 RNF222A6NCQ9 220 aa9.42□□□□□ -0.9
CLIP4-208ENST00000456385 C4orf47A7E2U8 309 aa9.42□□□□□ -0.9
CLIP4-208ENST00000456385 MCIDASD6RGH6 385 aa9.42□□□□□ -0.9
CLIP4-208ENST00000456385 GPRIN2O60269 458 aa9.42□□□□□ -0.9
CLIP4-208ENST00000456385 NFYBP25208 207 aa9.42□□□□□ -0.9
CLIP4-208ENST00000456385 ITGB8P26012 769 aa9.42□□□□□ -0.9
CLIP4-208ENST00000456385 AK4P27144 223 aaPredicted RBP9.42□□□□□ -0.9
CLIP4-208ENST00000456385 NPBWR1P48145 328 aa9.42□□□□□ -0.9
CLIP4-208ENST00000456385 ST8SIA6P61647 398 aa9.42□□□□□ -0.9
CLIP4-208ENST00000456385 BLOC1S1P78537 153 aa9.42□□□□□ -0.9
CLIP4-208ENST00000456385 PON3Q15166 354 aa9.42□□□□□ -0.9
CLIP4-208ENST00000456385 TRMT12Q53H54 448 aaKnown RBP9.42□□□□□ -0.9
CLIP4-208ENST00000456385 EIPR1Q53HC9 387 aa9.42□□□□□ -0.9
CLIP4-208ENST00000456385 CCDC157Q569K6 752 aa9.42□□□□□ -0.9
CLIP4-208ENST00000456385 ARHGAP11AQ6P4F7 1023 aa9.42□□□□□ -0.9
CLIP4-208ENST00000456385 UNQ6126/PRO20091Q6UXV3 157 aa9.42□□□□□ -0.9
CLIP4-208ENST00000456385 POMGNT2Q8NAT1 580 aa9.42□□□□□ -0.9
CLIP4-208ENST00000456385 OR2L5Q8NG80 312 aa9.42□□□□□ -0.9
CLIP4-208ENST00000456385 OR51D1Q8NGF3 324 aa9.42□□□□□ -0.9
CLIP4-208ENST00000456385 RXFP4Q8TDU9 374 aa9.42□□□□□ -0.9
CLIP4-208ENST00000456385 CXorf40AQ8TE69 158 aa9.42□□□□□ -0.9
CLIP4-208ENST00000456385 PTDSS2Q9BVG9 487 aa9.42□□□□□ -0.9
CLIP4-208ENST00000456385 TMEM231Q9H6L2 316 aa9.42□□□□□ -0.9
CLIP4-208ENST00000456385 APOBEC3BQ9UH17 382 aaKnown RBP9.42□□□□□ -0.9
CLIP4-208ENST00000456385 TNFSF18Q9UNG2 199 aa9.42□□□□□ -0.9
CLIP4-208ENST00000456385 LRRK1Q38SD2 2015 aa9.42□□□□□ -0.9
CLIP4-208ENST00000456385 TRAV18A0A075B6X5 111 aa9.42□□□□□ -0.9
CLIP4-208ENST00000456385 GGT3PA6NGU5 568 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms