RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 LINGO2Q7L985 606 aa11.25□□□□□ -0.61
CHD3-206ENST00000452447 UEVLDQ8IX04 471 aa11.25□□□□□ -0.61
CHD3-206ENST00000452447 GPR137CQ8N3F9 429 aa11.25□□□□□ -0.61
CHD3-206ENST00000452447 SMYD1Q8NB12 490 aa11.25□□□□□ -0.61
CHD3-206ENST00000452447 PIK3C3Q8NEB9 887 aa11.25□□□□□ -0.61
CHD3-206ENST00000452447 ANKK1Q8NFD2 765 aa11.25□□□□□ -0.61
CHD3-206ENST00000452447 TSPEARQ8WU66 669 aa11.25□□□□□ -0.61
CHD3-206ENST00000452447 HTRA1Q92743 480 aa11.25□□□□□ -0.61
CHD3-206ENST00000452447 BCL2L2Q92843 193 aaPredicted RBP11.25□□□□□ -0.61
CHD3-206ENST00000452447 SLC38A2Q96QD8 506 aa11.25□□□□□ -0.61
CHD3-206ENST00000452447 CGREF1Q99674 301 aa11.25□□□□□ -0.61
CHD3-206ENST00000452447 ASPNQ9BXN1 380 aa11.25□□□□□ -0.61
CHD3-206ENST00000452447 MOV10Q9HCE1 1003 aaKnown RBP11.25□□□□□ -0.61
CHD3-206ENST00000452447 B3GAT1Q9P2W7 334 aa11.25□□□□□ -0.61
CHD3-206ENST00000452447 CORINQ9Y5Q5 1042 aa11.25□□□□□ -0.61
CHD3-206ENST00000452447 PMF1-BGLAPU3KQ54 211 aa11.25□□□□□ -0.61
CHD3-206ENST00000452447 IGKV1D-42A0A075B6H8 117 aa11.24□□□□□ -0.61
CHD3-206ENST00000452447 A0A096LPE4 126 aa11.24□□□□□ -0.61
CHD3-206ENST00000452447 A0A0B4J2E0 115 aa11.24□□□□□ -0.61
CHD3-206ENST00000452447 A0A1B0GX12 115 aa11.24□□□□□ -0.61
CHD3-206ENST00000452447 A0A1W2PPZ6 126 aa11.24□□□□□ -0.61
CHD3-206ENST00000452447 M0QX08 132 aa11.24□□□□□ -0.61
CHD3-206ENST00000452447 EDF1O60869 148 aaKnown RBP11.24□□□□□ -0.61
CHD3-206ENST00000452447 HOXB1P14653 301 aaPredicted RBP11.24□□□□□ -0.61
CHD3-206ENST00000452447 PCBP3P57721 371 aaKnown RBP11.24□□□□□ -0.61
CHD3-206ENST00000452447 DSCR9P59020 149 aa11.24□□□□□ -0.61
CHD3-206ENST00000452447 METTL21CQ5VZV1 264 aa11.24□□□□□ -0.61
CHD3-206ENST00000452447 DNM1P46Q6ZS02 220 aa11.24□□□□□ -0.61
CHD3-206ENST00000452447 PTOV1Q86YD1 416 aa11.24□□□□□ -0.61
CHD3-206ENST00000452447 SLC30A8Q8IWU4 369 aa11.24□□□□□ -0.61
CHD3-206ENST00000452447 C10orf53Q8N6V4 93 aa11.24□□□□□ -0.61
CHD3-206ENST00000452447 ADPRHL1Q8NDY3 354 aa11.24□□□□□ -0.61
CHD3-206ENST00000452447 MAGEE2Q8TD90 523 aaPredicted RBP11.24□□□□□ -0.61
CHD3-206ENST00000452447 CRLF2Q9HC73 371 aa11.24□□□□□ -0.61
CHD3-206ENST00000452447 KLHL14Q9P2G3 628 aa11.24□□□□□ -0.61
CHD3-206ENST00000452447 YLPM1P49750 1951 aaKnown RBP11.24□□□□□ -0.61
CHD3-206ENST00000452447 ARPC4-TTLL3A0A0A6YYG9 625 aa11.24□□□□□ -0.61
CHD3-206ENST00000452447 IGHV1-18A0A0C4DH31 117 aa11.24□□□□□ -0.61
CHD3-206ENST00000452447 LOC102725191A0A1B0GVB3 256 aa11.24□□□□□ -0.61
CHD3-206ENST00000452447 RPL36A-HNRNPH2H7BZ11 118 aa11.24□□□□□ -0.61
CHD3-206ENST00000452447 H7C417 338 aa11.24□□□□□ -0.61
CHD3-206ENST00000452447 FZD7O75084 574 aa11.24□□□□□ -0.61
CHD3-206ENST00000452447 ZNF432O94892 652 aa11.24□□□□□ -0.61
CHD3-206ENST00000452447 OPN1SWP03999 348 aa11.24□□□□□ -0.61
CHD3-206ENST00000452447 C8BP07358 591 aa11.24□□□□□ -0.61
CHD3-206ENST00000452447 CDH12P55289 794 aa11.24□□□□□ -0.61
CHD3-206ENST00000452447 TUBA1BP68363 451 aa11.24□□□□□ -0.61
CHD3-206ENST00000452447 TUBA4AP68366 448 aa11.24□□□□□ -0.61
CHD3-206ENST00000452447 ARF1P84077 181 aaKnown RBP11.24□□□□□ -0.61
CHD3-206ENST00000452447 DUSP7Q16829 419 aa11.24□□□□□ -0.61
CHD3-206ENST00000452447 SWT1Q5T5J6 900 aaKnown RBP11.24□□□□□ -0.61
CHD3-206ENST00000452447 TUBA1AQ71U36 451 aa11.24□□□□□ -0.61
CHD3-206ENST00000452447 RETREG3Q86VR2 466 aa11.24□□□□□ -0.61
CHD3-206ENST00000452447 OR6S1Q8NH40 331 aa11.24□□□□□ -0.61
CHD3-206ENST00000452447 SLC26A7Q8TE54 656 aa11.24□□□□□ -0.61
CHD3-206ENST00000452447 FBXO17Q96EF6 278 aa11.24□□□□□ -0.61
CHD3-206ENST00000452447 MCHR1Q99705 422 aa11.24□□□□□ -0.61
CHD3-206ENST00000452447 WFDC6Q9BQY6 131 aa11.24□□□□□ -0.61
CHD3-206ENST00000452447 KATNB1Q9BVA0 655 aa11.24□□□□□ -0.61
CHD3-206ENST00000452447 ZNF385DQ9H6B1 395 aa11.24□□□□□ -0.61
CHD3-206ENST00000452447 DNHD1Q96M86 4753 aa11.23□□□□□ -0.61
CHD3-206ENST00000452447 IGHV4-30-2A0A087WSY4 118 aa11.23□□□□□ -0.61
CHD3-206ENST00000452447 M0R3H8 397 aa11.23□□□□□ -0.61
CHD3-206ENST00000452447 TPST2O60704 377 aa11.23□□□□□ -0.61
CHD3-206ENST00000452447 FMO6PO60774 539 aa11.23□□□□□ -0.61
CHD3-206ENST00000452447 CAPZA2P47755 286 aa11.23□□□□□ -0.61
CHD3-206ENST00000452447 POU3F1Q03052 451 aaPredicted RBP11.23□□□□□ -0.61
CHD3-206ENST00000452447 PMS2P3Q13401 168 aa11.23□□□□□ -0.61
CHD3-206ENST00000452447 SELPLGQ14242 412 aa11.23□□□□□ -0.61
CHD3-206ENST00000452447 CEACAM16Q2WEN9 425 aa11.23□□□□□ -0.61
CHD3-206ENST00000452447 ZNF613Q6PF04 617 aa11.23□□□□□ -0.61
CHD3-206ENST00000452447 PATL1Q86TB9 770 aaKnown RBP11.23□□□□□ -0.61
CHD3-206ENST00000452447 SCAIQ8N9R8 606 aa11.23□□□□□ -0.61
CHD3-206ENST00000452447 OR10A6Q8NH74 314 aa11.23□□□□□ -0.61
CHD3-206ENST00000452447 SLC41A3Q96GZ6 507 aa11.23□□□□□ -0.61
CHD3-206ENST00000452447 OR2M2Q96R28 347 aa11.23□□□□□ -0.61
CHD3-206ENST00000452447 TMEM43Q9BTV4 400 aa11.23□□□□□ -0.61
CHD3-206ENST00000452447 KAT8Q9H7Z6 458 aaKnown RBP11.23□□□□□ -0.61
CHD3-206ENST00000452447 GPR35Q9HC97 309 aa11.23□□□□□ -0.61
CHD3-206ENST00000452447 NOX1Q9Y5S8 564 aa11.23□□□□□ -0.61
CHD3-206ENST00000452447 ZNF726A6NNF4 738 aa11.22□□□□□ -0.61
CHD3-206ENST00000452447 MS4A18H0YCH9 400 aa11.22□□□□□ -0.61
CHD3-206ENST00000452447 M0R3G1 203 aa11.22□□□□□ -0.61
CHD3-206ENST00000452447 TRAF3IP2O43734 574 aaPredicted RBP11.22□□□□□ -0.61
CHD3-206ENST00000452447 BGLAPP02818 100 aa11.22□□□□□ -0.61
CHD3-206ENST00000452447 HLA-DOBP13765 273 aa11.22□□□□□ -0.61
CHD3-206ENST00000452447 AHCYP23526 432 aa11.22□□□□□ -0.61
CHD3-206ENST00000452447 SERPINF1P36955 418 aa11.22□□□□□ -0.61
CHD3-206ENST00000452447 EFNA4P52798 201 aa11.22□□□□□ -0.61
CHD3-206ENST00000452447 SNRPD2P62316 118 aaKnown RBP11.22□□□□□ -0.61
CHD3-206ENST00000452447 NAAAQ02083 359 aa11.22□□□□□ -0.61
CHD3-206ENST00000452447 KRTAP1-1Q07627 177 aa11.22□□□□□ -0.61
CHD3-206ENST00000452447 PUDPQ08623 228 aa11.22□□□□□ -0.61
CHD3-206ENST00000452447 CYLC2Q14093 348 aaPredicted RBP11.22□□□□□ -0.61
CHD3-206ENST00000452447 MS4A18Q3C1V0 323 aa11.22□□□□□ -0.61
CHD3-206ENST00000452447 C3orf36Q3SXR2 165 aa11.22□□□□□ -0.61
CHD3-206ENST00000452447 INTS11Q5TA45 600 aaKnown RBP11.22□□□□□ -0.61
CHD3-206ENST00000452447 CARD17Q5XLA6 110 aa11.22□□□□□ -0.61
CHD3-206ENST00000452447 VHLLQ6RSH7 139 aa11.22□□□□□ -0.61
CHD3-206ENST00000452447 TMEM123Q8N131 208 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms