RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 RFLNBQ8N5W9 214 aa11.42□□□□□ -0.58
UBE3B-204ENST00000449510 OR4C16Q8NGL9 310 aa11.42□□□□□ -0.58
UBE3B-204ENST00000449510 GPR148Q8TDV2 347 aa11.42□□□□□ -0.58
UBE3B-204ENST00000449510 SMIM4Q8WVI0 70 aa11.42□□□□□ -0.58
UBE3B-204ENST00000449510 ARL11Q969Q4 196 aa11.42□□□□□ -0.58
UBE3B-204ENST00000449510 FBXO17Q96EF6 278 aa11.42□□□□□ -0.58
UBE3B-204ENST00000449510 CMSS1Q9BQ75 279 aaKnown RBP11.42□□□□□ -0.58
UBE3B-204ENST00000449510 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.42□□□□□ -0.58
UBE3B-204ENST00000449510 SIRT3Q9NTG7 399 aaPredicted RBP11.42□□□□□ -0.58
UBE3B-204ENST00000449510 CPNE7Q9UBL6 633 aa11.42□□□□□ -0.58
UBE3B-204ENST00000449510 EPHA6Q9UF33 1036 aa11.42□□□□□ -0.58
UBE3B-204ENST00000449510 HCFC2Q9Y5Z7 792 aa11.42□□□□□ -0.58
UBE3B-204ENST00000449510 ANKRD31Q8N7Z5 1873 aa11.42□□□□□ -0.58
UBE3B-204ENST00000449510 TMEM200CA6NKL6 621 aa11.42□□□□□ -0.58
UBE3B-204ENST00000449510 CLDN4O14493 209 aa11.42□□□□□ -0.58
UBE3B-204ENST00000449510 RDH16O75452 317 aa11.42□□□□□ -0.58
UBE3B-204ENST00000449510 TMIGD3P0DMS9 266 aaPredicted RBP11.42□□□□□ -0.58
UBE3B-204ENST00000449510 CXCL2P19875 107 aa11.42□□□□□ -0.58
UBE3B-204ENST00000449510 AVPR2P30518 371 aa11.42□□□□□ -0.58
UBE3B-204ENST00000449510 CDK3Q00526 305 aa11.42□□□□□ -0.58
UBE3B-204ENST00000449510 TOMM20Q15388 145 aa11.42□□□□□ -0.58
UBE3B-204ENST00000449510 TMEM35AQ53FP2 167 aa11.42□□□□□ -0.58
UBE3B-204ENST00000449510 ABHD17CQ6PCB6 329 aa11.42□□□□□ -0.58
UBE3B-204ENST00000449510 LRRC69Q6ZNQ3 347 aa11.42□□□□□ -0.58
UBE3B-204ENST00000449510 ZNF619Q8N2I2 560 aa11.42□□□□□ -0.58
UBE3B-204ENST00000449510 CLRN3Q8NCR9 226 aa11.42□□□□□ -0.58
UBE3B-204ENST00000449510 OR52R1Q8NGF1 315 aa11.42□□□□□ -0.58
UBE3B-204ENST00000449510 GOT1L1Q8NHS2 421 aaPredicted RBP11.42□□□□□ -0.58
UBE3B-204ENST00000449510 MFSD8Q8NHS3 518 aa11.42□□□□□ -0.58
UBE3B-204ENST00000449510 SPACA5Q96QH8 159 aa11.42□□□□□ -0.58
UBE3B-204ENST00000449510 SLC22A11Q9NSA0 550 aa11.42□□□□□ -0.58
UBE3B-204ENST00000449510 ZNF701Q9NV72 531 aaPredicted RBP11.42□□□□□ -0.58
UBE3B-204ENST00000449510 RPH3AQ9Y2J0 694 aaPredicted RBP11.42□□□□□ -0.58
UBE3B-204ENST00000449510 SYT5O00445 386 aa11.41□□□□□ -0.58
UBE3B-204ENST00000449510 ZNF208O43345 1280 aa11.41□□□□□ -0.58
UBE3B-204ENST00000449510 GPANK1O95872 356 aa11.41□□□□□ -0.58
UBE3B-204ENST00000449510 ICAM2P13598 275 aa11.41□□□□□ -0.58
UBE3B-204ENST00000449510 CSF2RAP15509 400 aa11.41□□□□□ -0.58
UBE3B-204ENST00000449510 PPM1AP35813 382 aa11.41□□□□□ -0.58
UBE3B-204ENST00000449510 ILF3Q12906 894 aaKnown RBP eCLIP11.41□□□□□ -0.58
UBE3B-204ENST00000449510 CLINT1Q14677 625 aa11.41□□□□□ -0.58
UBE3B-204ENST00000449510 ALG10Q5BKT4 473 aa11.41□□□□□ -0.58
UBE3B-204ENST00000449510 PDZD11Q5EBL8 140 aa11.41□□□□□ -0.58
UBE3B-204ENST00000449510 GLYATL3Q5SZD4 288 aa11.41□□□□□ -0.58
UBE3B-204ENST00000449510 ADGRG3Q86Y34 549 aa11.41□□□□□ -0.58
UBE3B-204ENST00000449510 MUC20Q8N307 709 aaPredicted RBP11.41□□□□□ -0.58
UBE3B-204ENST00000449510 BPIFCQ8NFQ6 507 aa11.41□□□□□ -0.58
UBE3B-204ENST00000449510 OR4S1Q8NGB4 309 aa11.41□□□□□ -0.58
UBE3B-204ENST00000449510 OR5K2Q8NHB8 316 aa11.41□□□□□ -0.58
UBE3B-204ENST00000449510 TCEAL3Q969E4 200 aa11.41□□□□□ -0.58
UBE3B-204ENST00000449510 PELI1Q96FA3 418 aa11.41□□□□□ -0.58
UBE3B-204ENST00000449510 SGPP1Q9BX95 441 aa11.41□□□□□ -0.58
UBE3B-204ENST00000449510 ELOVL3Q9HB03 270 aa11.41□□□□□ -0.58
UBE3B-204ENST00000449510 IL20Q9NYY1 176 aa11.41□□□□□ -0.58
UBE3B-204ENST00000449510 A0A0C4DFX4 3053 aa11.41□□□□□ -0.58
UBE3B-204ENST00000449510 PRAMEF27A3QJZ7 478 aa11.41□□□□□ -0.58
UBE3B-204ENST00000449510 TMEM235A6NFC5 223 aa11.41□□□□□ -0.58
UBE3B-204ENST00000449510 OR5H14A6NHG9 310 aa11.41□□□□□ -0.58
UBE3B-204ENST00000449510 IMPA2O14732 288 aa11.41□□□□□ -0.58
UBE3B-204ENST00000449510 SCGNO76038 276 aa11.41□□□□□ -0.58
UBE3B-204ENST00000449510 HCKP08631 526 aa11.41□□□□□ -0.58
UBE3B-204ENST00000449510 GIPP09681 153 aaPredicted RBP11.41□□□□□ -0.58
UBE3B-204ENST00000449510 S1PR1P21453 382 aa11.41□□□□□ -0.58
UBE3B-204ENST00000449510 MAOBP27338 520 aa11.41□□□□□ -0.58
UBE3B-204ENST00000449510 P2RX1P51575 399 aa11.41□□□□□ -0.58
UBE3B-204ENST00000449510 MFSD12Q6NUT3 480 aa11.41□□□□□ -0.58
UBE3B-204ENST00000449510 ATRAIDQ6UW56 229 aa11.41□□□□□ -0.58
UBE3B-204ENST00000449510 TCEAL8Q8IYN2 117 aa11.41□□□□□ -0.58
UBE3B-204ENST00000449510 MORN4Q8NDC4 146 aa11.41□□□□□ -0.58
UBE3B-204ENST00000449510 HSD17B8Q92506 261 aa11.41□□□□□ -0.58
UBE3B-204ENST00000449510 PTP4A1Q93096 173 aa11.41□□□□□ -0.58
UBE3B-204ENST00000449510 GAL3ST3Q96A11 431 aa11.41□□□□□ -0.58
UBE3B-204ENST00000449510 SDF2Q99470 211 aa11.41□□□□□ -0.58
UBE3B-204ENST00000449510 PELOQ9BRX2 385 aaKnown RBP11.41□□□□□ -0.58
UBE3B-204ENST00000449510 ST6GALNAC5Q9BVH7 336 aa11.41□□□□□ -0.58
UBE3B-204ENST00000449510 EDDM13A0A1B0GTR0 161 aa11.41□□□□□ -0.58
UBE3B-204ENST00000449510 KDM4EB2RXH2 506 aaPredicted RBP11.41□□□□□ -0.58
UBE3B-204ENST00000449510 MAN2B1O00754 1011 aa11.41□□□□□ -0.58
UBE3B-204ENST00000449510 DPM1O60762 260 aa11.41□□□□□ -0.58
UBE3B-204ENST00000449510 ITGA5P08648 1049 aa11.41□□□□□ -0.58
UBE3B-204ENST00000449510 AKT2P31751 481 aa11.41□□□□□ -0.58
UBE3B-204ENST00000449510 POU4F2Q12837 409 aa11.41□□□□□ -0.58
UBE3B-204ENST00000449510 MFSD13AQ14CX5 517 aa11.41□□□□□ -0.58
UBE3B-204ENST00000449510 ABHD13Q7L211 337 aa11.41□□□□□ -0.58
UBE3B-204ENST00000449510 CAMKVQ8NCB2 501 aa11.41□□□□□ -0.58
UBE3B-204ENST00000449510 C15orf40Q8WUR7 153 aa11.41□□□□□ -0.58
UBE3B-204ENST00000449510 C14orf79Q96F83 325 aa11.41□□□□□ -0.58
UBE3B-204ENST00000449510 ZNF649Q9BS31 505 aa11.41□□□□□ -0.58
UBE3B-204ENST00000449510 FBRSQ9HAH7 460 aa11.41□□□□□ -0.58
UBE3B-204ENST00000449510 PARPBPQ9NWS1 579 aa11.41□□□□□ -0.58
UBE3B-204ENST00000449510 CENPVL1A0A0U1RR11 272 aa11.4□□□□□ -0.58
UBE3B-204ENST00000449510 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.4□□□□□ -0.58
UBE3B-204ENST00000449510 NFATC1O95644 943 aa11.4□□□□□ -0.58
UBE3B-204ENST00000449510 OR2T7P0C7T2 308 aa11.4□□□□□ -0.58
UBE3B-204ENST00000449510 FOSL2P15408 326 aa11.4□□□□□ -0.58
UBE3B-204ENST00000449510 SRSF5Q13243 272 aaKnown RBP11.4□□□□□ -0.58
UBE3B-204ENST00000449510 EBPQ15125 230 aaKnown RBP11.4□□□□□ -0.58
UBE3B-204ENST00000449510 NKAPLQ5M9Q1 402 aa11.4□□□□□ -0.58
UBE3B-204ENST00000449510 RPL13AP3Q6NVV1 102 aa11.4□□□□□ -0.58
UBE3B-204ENST00000449510 SLC48A1Q6P1K1 146 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms