RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 CPN1P15169 458 aa13.08□□□□□ -0.32
TNF-208ENST00000449264 CDC42P60953 191 aa13.08□□□□□ -0.32
TNF-208ENST00000449264 CDK5Q00535 292 aa13.08□□□□□ -0.32
TNF-208ENST00000449264 MYBPC1Q00872 1141 aa13.08□□□□□ -0.32
TNF-208ENST00000449264 PON3Q15166 354 aa13.08□□□□□ -0.32
TNF-208ENST00000449264 MS4A18Q3C1V0 323 aa13.08□□□□□ -0.32
TNF-208ENST00000449264 DPY19L2P2Q6ZN68 376 aa13.08□□□□□ -0.32
TNF-208ENST00000449264 CCDC71Q8IV32 467 aaPredicted RBP13.08□□□□□ -0.32
TNF-208ENST00000449264 SLC43A2Q8N370 569 aa13.08□□□□□ -0.32
TNF-208ENST00000449264 GPX7Q96SL4 187 aaPredicted RBP13.08□□□□□ -0.32
TNF-208ENST00000449264 APOL4Q9BPW4 351 aa13.08□□□□□ -0.32
TNF-208ENST00000449264 TUBA1CQ9BQE3 449 aa13.08□□□□□ -0.32
TNF-208ENST00000449264 TEX12Q9BXU0 123 aa13.08□□□□□ -0.32
TNF-208ENST00000449264 PRDM14Q9GZV8 571 aa13.08□□□□□ -0.32
TNF-208ENST00000449264 MCTS1Q9ULC4 181 aaKnown RBP13.08□□□□□ -0.32
TNF-208ENST00000449264 IER3IP1Q9Y5U9 82 aa13.08□□□□□ -0.32
TNF-208ENST00000449264 ZFYVE26Q68DK2 2539 aa13.08□□□□□ -0.32
TNF-208ENST00000449264 A0A1W2PNV4 684 aa13.07□□□□□ -0.32
TNF-208ENST00000449264 CD14P08571 375 aa13.07□□□□□ -0.32
TNF-208ENST00000449264 RPS6KA3P51812 740 aa13.07□□□□□ -0.32
TNF-208ENST00000449264 TDGF1P3P51864 188 aa13.07□□□□□ -0.32
TNF-208ENST00000449264 AGFG1P52594 562 aaKnown RBP13.07□□□□□ -0.32
TNF-208ENST00000449264 H3F3AP84243 136 aa13.07□□□□□ -0.32
TNF-208ENST00000449264 IL5RAQ01344 420 aa13.07□□□□□ -0.32
TNF-208ENST00000449264 MELKQ14680 651 aa13.07□□□□□ -0.32
TNF-208ENST00000449264 KRTCAP3Q53RY4 240 aa13.07□□□□□ -0.32
TNF-208ENST00000449264 ZNF691Q5VV52 312 aa13.07□□□□□ -0.32
TNF-208ENST00000449264 C12orf73Q69YU5 71 aa13.07□□□□□ -0.32
TNF-208ENST00000449264 FCRLAQ7L513 359 aa13.07□□□□□ -0.32
TNF-208ENST00000449264 FGD2Q7Z6J4 655 aa13.07□□□□□ -0.32
TNF-208ENST00000449264 CHERPQ8IWX8 916 aaKnown RBP13.07□□□□□ -0.32
TNF-208ENST00000449264 UEVLDQ8IX04 471 aa13.07□□□□□ -0.32
TNF-208ENST00000449264 PM20D2Q8IYS1 436 aa13.07□□□□□ -0.32
TNF-208ENST00000449264 C8orf59Q8N0T1 100 aaPredicted RBP13.07□□□□□ -0.32
TNF-208ENST00000449264 LNX2Q8N448 690 aa13.07□□□□□ -0.32
TNF-208ENST00000449264 LSM14AQ8ND56 463 aaKnown RBP13.07□□□□□ -0.32
TNF-208ENST00000449264 ANKK1Q8NFD2 765 aa13.07□□□□□ -0.32
TNF-208ENST00000449264 FNDC9Q8TBE3 224 aa13.07□□□□□ -0.32
TNF-208ENST00000449264 RASD2Q96D21 266 aa13.07□□□□□ -0.32
TNF-208ENST00000449264 SLC38A2Q96QD8 506 aa13.07□□□□□ -0.32
TNF-208ENST00000449264 TSPAN32Q96QS1 320 aa13.07□□□□□ -0.32
TNF-208ENST00000449264 SLX1AQ9BQ83 275 aa13.07□□□□□ -0.32
TNF-208ENST00000449264 ANKRD60Q9BZ19 345 aa13.07□□□□□ -0.32
TNF-208ENST00000449264 PRRG4Q9BZD6 226 aa13.07□□□□□ -0.32
TNF-208ENST00000449264 PRRG3Q9BZD7 231 aa13.07□□□□□ -0.32
TNF-208ENST00000449264 NRIP3Q9NQ35 241 aa13.07□□□□□ -0.32
TNF-208ENST00000449264 RASSF1Q9NS23 344 aa13.07□□□□□ -0.32
TNF-208ENST00000449264 PAQR5Q9NXK6 330 aaPredicted RBP13.07□□□□□ -0.32
TNF-208ENST00000449264 B3GAT1Q9P2W7 334 aa13.07□□□□□ -0.32
TNF-208ENST00000449264 COL6A6A6NMZ7 2263 aa13.07□□□□□ -0.32
TNF-208ENST00000449264 TEX13CA0A0J9YWL9 993 aa13.06□□□□□ -0.32
TNF-208ENST00000449264 A0A1W2PRG6 482 aa13.06□□□□□ -0.32
TNF-208ENST00000449264 OR14I1A6ND48 311 aa13.06□□□□□ -0.32
TNF-208ENST00000449264 CLCA1A8K7I4 914 aa13.06□□□□□ -0.32
TNF-208ENST00000449264 E9PQ18 207 aa13.06□□□□□ -0.32
TNF-208ENST00000449264 SLC2A10O95528 541 aa13.06□□□□□ -0.32
TNF-208ENST00000449264 TPOP07202 933 aa13.06□□□□□ -0.32
TNF-208ENST00000449264 IFNGR1P15260 489 aa13.06□□□□□ -0.32
TNF-208ENST00000449264 GRK5P34947 590 aa13.06□□□□□ -0.32
TNF-208ENST00000449264 PTGS2P35354 604 aa13.06□□□□□ -0.32
TNF-208ENST00000449264 ZP4Q12836 540 aa13.06□□□□□ -0.32
TNF-208ENST00000449264 NFATC3Q12968 1075 aa13.06□□□□□ -0.32
TNF-208ENST00000449264 C1DQ13901 141 aaKnown RBP13.06□□□□□ -0.32
TNF-208ENST00000449264 SNAPC1Q16533 368 aa13.06□□□□□ -0.32
TNF-208ENST00000449264 ACKR1Q16570 336 aa13.06□□□□□ -0.32
TNF-208ENST00000449264 EEF1A1P5Q5VTE0 462 aa13.06□□□□□ -0.32
TNF-208ENST00000449264 USP51Q70EK9 711 aa13.06□□□□□ -0.32
TNF-208ENST00000449264 SETD9Q8NE22 299 aa13.06□□□□□ -0.32
TNF-208ENST00000449264 ABHD3Q8WU67 409 aa13.06□□□□□ -0.32
TNF-208ENST00000449264 UBE2FQ969M7 185 aa13.06□□□□□ -0.32
TNF-208ENST00000449264 PLEKHA8Q96JA3 519 aa13.06□□□□□ -0.32
TNF-208ENST00000449264 Q96M85 177 aa13.06□□□□□ -0.32
TNF-208ENST00000449264 PNPLA3Q9NST1 481 aa13.06□□□□□ -0.32
TNF-208ENST00000449264 MED29Q9NX70 200 aa13.06□□□□□ -0.32
TNF-208ENST00000449264 GRHPRQ9UBQ7 328 aa13.06□□□□□ -0.32
TNF-208ENST00000449264 AASSQ9UDR5 926 aa13.06□□□□□ -0.32
TNF-208ENST00000449264 BAIAP2Q9UQB8 552 aa13.06□□□□□ -0.32
TNF-208ENST00000449264 RASD1Q9Y272 281 aa13.06□□□□□ -0.32
TNF-208ENST00000449264 GPR52Q9Y2T5 361 aa13.06□□□□□ -0.32
TNF-208ENST00000449264 LRRC42Q9Y546 428 aa13.06□□□□□ -0.32
TNF-208ENST00000449264 KALRNO60229 2985 aa13.06□□□□□ -0.32
TNF-208ENST00000449264 ABOP16442 354 aa13.05□□□□□ -0.32
TNF-208ENST00000449264 ZNF43P17038 809 aa13.05□□□□□ -0.32
TNF-208ENST00000449264 IL18R1Q13478 541 aa13.05□□□□□ -0.32
TNF-208ENST00000449264 ABLIM2Q6H8Q1 611 aa13.05□□□□□ -0.32
TNF-208ENST00000449264 KRT80Q6KB66 452 aa13.05□□□□□ -0.32
TNF-208ENST00000449264 ZNF585AQ6P3V2 769 aa13.05□□□□□ -0.32
TNF-208ENST00000449264 GFRALQ6UXV0 394 aa13.05□□□□□ -0.32
TNF-208ENST00000449264 FAM122BQ7Z309 247 aa13.05□□□□□ -0.32
TNF-208ENST00000449264 PXKQ7Z7A4 578 aa13.05□□□□□ -0.32
TNF-208ENST00000449264 DEPDC4Q8N2C3 294 aa13.05□□□□□ -0.32
TNF-208ENST00000449264 TCEANCQ8N8B7 351 aa13.05□□□□□ -0.32
TNF-208ENST00000449264 OR4K13Q8NH42 304 aa13.05□□□□□ -0.32
TNF-208ENST00000449264 OXGR1Q96P68 337 aa13.05□□□□□ -0.32
TNF-208ENST00000449264 IL4I1Q96RQ9 567 aa13.05□□□□□ -0.32
TNF-208ENST00000449264 RNF6Q9Y252 685 aa13.05□□□□□ -0.32
TNF-208ENST00000449264 NOX1Q9Y5S8 564 aa13.05□□□□□ -0.32
TNF-208ENST00000449264 MED12LQ86YW9 2145 aa13.05□□□□□ -0.32
TNF-208ENST00000449264 RIIAD1A6NNX1 92 aa13.05□□□□□ -0.32
TNF-208ENST00000449264 KDM4EB2RXH2 506 aaPredicted RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms