RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 SYNGR4O95473 234 aa12.55□□□□□ -0.4
SHMT2-203ENST00000449049 IGHMP01871 453 aa12.55□□□□□ -0.4
SHMT2-203ENST00000449049 F13BP05160 661 aa12.55□□□□□ -0.4
SHMT2-203ENST00000449049 CD14P08571 375 aa12.55□□□□□ -0.4
SHMT2-203ENST00000449049 APEHP13798 732 aaKnown RBP12.55□□□□□ -0.4
SHMT2-203ENST00000449049 EDN3P14138 238 aa12.55□□□□□ -0.4
SHMT2-203ENST00000449049 AHCYP23526 432 aa12.55□□□□□ -0.4
SHMT2-203ENST00000449049 RPL4P36578 427 aaKnown RBP12.55□□□□□ -0.4
SHMT2-203ENST00000449049 SMSP52788 366 aa12.55□□□□□ -0.4
SHMT2-203ENST00000449049 PON3Q15166 354 aa12.55□□□□□ -0.4
SHMT2-203ENST00000449049 PGGHGQ32M88 737 aa12.55□□□□□ -0.4
SHMT2-203ENST00000449049 C6orf52Q5T4I8 152 aa12.55□□□□□ -0.4
SHMT2-203ENST00000449049 TMEM236Q5W0B7 351 aa12.55□□□□□ -0.4
SHMT2-203ENST00000449049 C12orf73Q69YU5 71 aa12.55□□□□□ -0.4
SHMT2-203ENST00000449049 NHLRC1Q6VVB1 395 aa12.55□□□□□ -0.4
SHMT2-203ENST00000449049 FCRLAQ7L513 359 aa12.55□□□□□ -0.4
SHMT2-203ENST00000449049 CHMP1BQ7LBR1 199 aa12.55□□□□□ -0.4
SHMT2-203ENST00000449049 LNX2Q8N448 690 aa12.55□□□□□ -0.4
SHMT2-203ENST00000449049 IQCF1Q8N6M8 205 aa12.55□□□□□ -0.4
SHMT2-203ENST00000449049 ANKK1Q8NFD2 765 aa12.55□□□□□ -0.4
SHMT2-203ENST00000449049 RNF128Q8TEB7 428 aa12.55□□□□□ -0.4
SHMT2-203ENST00000449049 CYGBQ8WWM9 190 aa12.55□□□□□ -0.4
SHMT2-203ENST00000449049 ROBO4Q8WZ75 1007 aa12.55□□□□□ -0.4
SHMT2-203ENST00000449049 OXGR1Q96P68 337 aa12.55□□□□□ -0.4
SHMT2-203ENST00000449049 IFT27Q9BW83 186 aa12.55□□□□□ -0.4
SHMT2-203ENST00000449049 SF3B5Q9BWJ5 86 aaKnown RBP12.55□□□□□ -0.4
SHMT2-203ENST00000449049 PNPLA3Q9NST1 481 aa12.55□□□□□ -0.4
SHMT2-203ENST00000449049 ZNF175Q9Y473 711 aa12.55□□□□□ -0.4
SHMT2-203ENST00000449049 NPIPB13A6NJU9 1138 aa12.54□□□□□ -0.4
SHMT2-203ENST00000449049 AHRRA9YTQ3 701 aa12.54□□□□□ -0.4
SHMT2-203ENST00000449049 NPIPB4C9JG80 1138 aa12.54□□□□□ -0.4
SHMT2-203ENST00000449049 ARPC3O15145 178 aa12.54□□□□□ -0.4
SHMT2-203ENST00000449049 CYTIPO60759 359 aa12.54□□□□□ -0.4
SHMT2-203ENST00000449049 PPP1R3DO95685 299 aa12.54□□□□□ -0.4
SHMT2-203ENST00000449049 GRK5P34947 590 aa12.54□□□□□ -0.4
SHMT2-203ENST00000449049 GGT2P36268 569 aa12.54□□□□□ -0.4
SHMT2-203ENST00000449049 CTXN1P60606 82 aa12.54□□□□□ -0.4
SHMT2-203ENST00000449049 NFATC3Q12968 1075 aa12.54□□□□□ -0.4
SHMT2-203ENST00000449049 EMC4Q5J8M3 183 aa12.54□□□□□ -0.4
SHMT2-203ENST00000449049 TMEM225Q6GV28 225 aa12.54□□□□□ -0.4
SHMT2-203ENST00000449049 ACSM5Q6NUN0 579 aa12.54□□□□□ -0.4
SHMT2-203ENST00000449049 FAM122BQ7Z309 247 aa12.54□□□□□ -0.4
SHMT2-203ENST00000449049 KDM8Q8N371 416 aa12.54□□□□□ -0.4
SHMT2-203ENST00000449049 FAM57AQ8TBR7 257 aa12.54□□□□□ -0.4
SHMT2-203ENST00000449049 KATNB1Q9BVA0 655 aa12.54□□□□□ -0.4
SHMT2-203ENST00000449049 CLCF1Q9UBD9 225 aa12.54□□□□□ -0.4
SHMT2-203ENST00000449049 NOX1Q9Y5S8 564 aa12.54□□□□□ -0.4
SHMT2-203ENST00000449049 MED12Q93074 2177 aa12.54□□□□□ -0.4
SHMT2-203ENST00000449049 ZNF716A6NP11 495 aa12.53□□□□□ -0.4
SHMT2-203ENST00000449049 HLA-DOBP13765 273 aa12.53□□□□□ -0.4
SHMT2-203ENST00000449049 SLC17A1Q14916 467 aa12.53□□□□□ -0.4
SHMT2-203ENST00000449049 GFRALQ6UXV0 394 aa12.53□□□□□ -0.4
SHMT2-203ENST00000449049 USP51Q70EK9 711 aa12.53□□□□□ -0.4
SHMT2-203ENST00000449049 CCDC71Q8IV32 467 aaPredicted RBP12.53□□□□□ -0.4
SHMT2-203ENST00000449049 OR5M9Q8NGP3 310 aa12.53□□□□□ -0.4
SHMT2-203ENST00000449049 CPT1CQ8TCG5 803 aa12.53□□□□□ -0.4
SHMT2-203ENST00000449049 POLDIP3Q9BY77 421 aaKnown RBP12.53□□□□□ -0.4
SHMT2-203ENST00000449049 KLHL13Q9P2N7 655 aa12.53□□□□□ -0.4
SHMT2-203ENST00000449049 ZNF835Q9Y2P0 537 aa12.53□□□□□ -0.4
SHMT2-203ENST00000449049 ADAM18Q9Y3Q7 739 aa12.53□□□□□ -0.4
SHMT2-203ENST00000449049 GMPPBQ9Y5P6 360 aa12.53□□□□□ -0.4
SHMT2-203ENST00000449049 MAP1BP46821 2468 aaKnown RBP12.53□□□□□ -0.4
SHMT2-203ENST00000449049 ACACBO00763 2458 aa12.53□□□□□ -0.4
SHMT2-203ENST00000449049 MAGEA13PA6NCF6 341 aa12.53□□□□□ -0.4
SHMT2-203ENST00000449049 IMPA2O14732 288 aa12.53□□□□□ -0.4
SHMT2-203ENST00000449049 TRAF3IP2O43734 574 aaPredicted RBP12.53□□□□□ -0.4
SHMT2-203ENST00000449049 IDH3BO43837 385 aa12.53□□□□□ -0.4
SHMT2-203ENST00000449049 TXNDC12O95881 172 aa12.53□□□□□ -0.4
SHMT2-203ENST00000449049 PLGP00747 810 aaPredicted RBP12.53□□□□□ -0.4
SHMT2-203ENST00000449049 SLC16A1P53985 500 aa12.53□□□□□ -0.4
SHMT2-203ENST00000449049 ERVK-25P63136 954 aa12.53□□□□□ -0.4
SHMT2-203ENST00000449049 POU3F1Q03052 451 aaPredicted RBP12.53□□□□□ -0.4
SHMT2-203ENST00000449049 IL18R1Q13478 541 aa12.53□□□□□ -0.4
SHMT2-203ENST00000449049 PDK3Q15120 406 aa12.53□□□□□ -0.4
SHMT2-203ENST00000449049 ZNF691Q5VV52 312 aa12.53□□□□□ -0.4
SHMT2-203ENST00000449049 GPAT4Q86UL3 456 aa12.53□□□□□ -0.4
SHMT2-203ENST00000449049 UEVLDQ8IX04 471 aa12.53□□□□□ -0.4
SHMT2-203ENST00000449049 FNDC9Q8TBE3 224 aa12.53□□□□□ -0.4
SHMT2-203ENST00000449049 ERMAPQ96PL5 475 aaPredicted RBP12.53□□□□□ -0.4
SHMT2-203ENST00000449049 TSPAN32Q96QS1 320 aa12.53□□□□□ -0.4
SHMT2-203ENST00000449049 ANKRD60Q9BZ19 345 aa12.53□□□□□ -0.4
SHMT2-203ENST00000449049 TXNIPQ9H3M7 391 aa12.53□□□□□ -0.4
SHMT2-203ENST00000449049 IER3IP1Q9Y5U9 82 aa12.53□□□□□ -0.4
SHMT2-203ENST00000449049 PKD1L2Q7Z442 2459 aa12.53□□□□□ -0.4
SHMT2-203ENST00000449049 SPENQ96T58 3664 aaKnown RBP12.53□□□□□ -0.4
SHMT2-203ENST00000449049 A0A1W2PRG6 482 aa12.52□□□□□ -0.4
SHMT2-203ENST00000449049 SLC22A20A6NK97 555 aa12.52□□□□□ -0.4
SHMT2-203ENST00000449049 WDR1O75083 606 aa12.52□□□□□ -0.4
SHMT2-203ENST00000449049 AQP8O94778 261 aa12.52□□□□□ -0.4
SHMT2-203ENST00000449049 HMGN1P05114 100 aa12.52□□□□□ -0.4
SHMT2-203ENST00000449049 TPOP07202 933 aa12.52□□□□□ -0.4
SHMT2-203ENST00000449049 FCGR2AP12318 317 aa12.52□□□□□ -0.4
SHMT2-203ENST00000449049 GABRA1P14867 456 aa12.52□□□□□ -0.4
SHMT2-203ENST00000449049 ABOP16442 354 aa12.52□□□□□ -0.4
SHMT2-203ENST00000449049 SDHAP31040 664 aa12.52□□□□□ -0.4
SHMT2-203ENST00000449049 PTGER4P35408 488 aa12.52□□□□□ -0.4
SHMT2-203ENST00000449049 MLLT10P55197 1068 aa12.52□□□□□ -0.4
SHMT2-203ENST00000449049 MYBPC1Q00872 1141 aa12.52□□□□□ -0.4
SHMT2-203ENST00000449049 SF3B4Q15427 424 aaKnown RBP eCLIP12.52□□□□□ -0.43e-8■■■■■ 35.5
SHMT2-203ENST00000449049 ACKR1Q16570 336 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms