RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 FAPQ12884 760 aa12.85□□□□□ -0.35
USP39-206ENST00000448971 C1DQ13901 141 aaKnown RBP12.85□□□□□ -0.35
USP39-206ENST00000448971 IFI44LQ53G44 452 aa12.85□□□□□ -0.35
USP39-206ENST00000448971 NIPAL3Q6P499 406 aa12.85□□□□□ -0.35
USP39-206ENST00000448971 WDR88Q6ZMY6 472 aa12.85□□□□□ -0.35
USP39-206ENST00000448971 FKBP9P1Q75LS8 142 aa12.85□□□□□ -0.35
USP39-206ENST00000448971 VTCN1Q7Z7D3 282 aa12.85□□□□□ -0.35
USP39-206ENST00000448971 TSPYL5Q86VY4 417 aaPredicted RBP12.85□□□□□ -0.35
USP39-206ENST00000448971 KDM8Q8N371 416 aa12.85□□□□□ -0.35
USP39-206ENST00000448971 OR6S1Q8NH40 331 aa12.85□□□□□ -0.35
USP39-206ENST00000448971 GEMIN6Q8WXD5 167 aaKnown RBP12.85□□□□□ -0.35
USP39-206ENST00000448971 KCTD12Q96CX2 325 aaKnown RBP12.85□□□□□ -0.35
USP39-206ENST00000448971 HSH2DQ96JZ2 352 aa12.85□□□□□ -0.35
USP39-206ENST00000448971 PRRC1Q96M27 445 aa12.85□□□□□ -0.35
USP39-206ENST00000448971 ADAM21Q9UKJ8 722 aa12.85□□□□□ -0.35
USP39-206ENST00000448971 B3GALT5Q9Y2C3 310 aa12.85□□□□□ -0.35
USP39-206ENST00000448971 STAB1Q9NY15 2570 aa12.84□□□□□ -0.35
USP39-206ENST00000448971 KIAA1324LA8MWY0 1029 aaPredicted RBP12.84□□□□□ -0.35
USP39-206ENST00000448971 LRRN3E7EW58 273 aa12.84□□□□□ -0.35
USP39-206ENST00000448971 FZD7O75084 574 aa12.84□□□□□ -0.35
USP39-206ENST00000448971 SERPINI2O75830 405 aa12.84□□□□□ -0.35
USP39-206ENST00000448971 MT-ATP6P00846 226 aa12.84□□□□□ -0.35
USP39-206ENST00000448971 THY1P04216 161 aa12.84□□□□□ -0.35
USP39-206ENST00000448971 UMPSP11172 480 aa12.84□□□□□ -0.35
USP39-206ENST00000448971 CLDN17P56750 224 aa12.84□□□□□ -0.35
USP39-206ENST00000448971 PMS2P3Q13401 168 aa12.84□□□□□ -0.35
USP39-206ENST00000448971 PIN1Q13526 163 aaPredicted RBP12.84□□□□□ -0.35
USP39-206ENST00000448971 TSPO2Q5TGU0 170 aa12.84□□□□□ -0.35
USP39-206ENST00000448971 C9orf135Q5VTT2 229 aa12.84□□□□□ -0.35
USP39-206ENST00000448971 C22orf34Q6ZV56 151 aa12.84□□□□□ -0.35
USP39-206ENST00000448971 CREB3L2Q70SY1 520 aa12.84□□□□□ -0.35
USP39-206ENST00000448971 CBLL1Q75N03 491 aa12.84□□□□□ -0.35
USP39-206ENST00000448971 H1FNTQ75WM6 255 aaPredicted RBP12.84□□□□□ -0.35
USP39-206ENST00000448971 UEVLDQ8IX04 471 aa12.84□□□□□ -0.35
USP39-206ENST00000448971 CIARTQ8N365 385 aaPredicted RBP12.84□□□□□ -0.35
USP39-206ENST00000448971 FITM2Q8N6M3 262 aa12.84□□□□□ -0.35
USP39-206ENST00000448971 SCAIQ8N9R8 606 aa12.84□□□□□ -0.35
USP39-206ENST00000448971 FAM156AQ8NDB6 213 aa12.84□□□□□ -0.35
USP39-206ENST00000448971 ADPRHL1Q8NDY3 354 aa12.84□□□□□ -0.35
USP39-206ENST00000448971 MOGAT1Q96PD6 335 aa12.84□□□□□ -0.35
USP39-206ENST00000448971 ALKBH3Q96Q83 286 aaPredicted RBP12.84□□□□□ -0.35
USP39-206ENST00000448971 SLCO5A1Q9H2Y9 848 aa12.84□□□□□ -0.35
USP39-206ENST00000448971 SLC7A10Q9NS82 523 aa12.84□□□□□ -0.35
USP39-206ENST00000448971 FAM53CQ9NYF3 392 aa12.84□□□□□ -0.35
USP39-206ENST00000448971 TAS2R16Q9NYV7 291 aa12.84□□□□□ -0.35
USP39-206ENST00000448971 RPS6KA6Q9UK32 745 aa12.84□□□□□ -0.35
USP39-206ENST00000448971 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.83□□□□□ -0.36
USP39-206ENST00000448971 DEFB108AA8MXU0 73 aa12.83□□□□□ -0.36
USP39-206ENST00000448971 SIAH2O43255 324 aa12.83□□□□□ -0.36
USP39-206ENST00000448971 LYPD3O95274 346 aa12.83□□□□□ -0.36
USP39-206ENST00000448971 CH25HO95992 272 aa12.83□□□□□ -0.36
USP39-206ENST00000448971 THBDP07204 575 aa12.83□□□□□ -0.36
USP39-206ENST00000448971 AHCYP23526 432 aa12.83□□□□□ -0.36
USP39-206ENST00000448971 NTF4P34130 210 aa12.83□□□□□ -0.36
USP39-206ENST00000448971 SELENOPP49908 381 aa12.83□□□□□ -0.36
USP39-206ENST00000448971 MNAT1P51948 309 aa12.83□□□□□ -0.36
USP39-206ENST00000448971 POU3F1Q03052 451 aaPredicted RBP12.83□□□□□ -0.36
USP39-206ENST00000448971 PUDPQ08623 228 aa12.83□□□□□ -0.36
USP39-206ENST00000448971 KRT72Q14CN4 511 aa12.83□□□□□ -0.36
USP39-206ENST00000448971 TAB1Q15750 504 aa12.83□□□□□ -0.36
USP39-206ENST00000448971 BEX5Q5H9J7 111 aa12.83□□□□□ -0.36
USP39-206ENST00000448971 SAMD4BQ5PRF9 694 aaKnown RBP12.83□□□□□ -0.36
USP39-206ENST00000448971 GLYATQ6IB77 296 aa12.83□□□□□ -0.36
USP39-206ENST00000448971 THSD4Q6ZMP0 1018 aa12.83□□□□□ -0.36
USP39-206ENST00000448971 ABHD12BQ7Z5M8 362 aaPredicted RBP12.83□□□□□ -0.36
USP39-206ENST00000448971 EPHX4Q8IUS5 362 aa12.83□□□□□ -0.36
USP39-206ENST00000448971 DEFB107AQ8IZN7 70 aa12.83□□□□□ -0.36
USP39-206ENST00000448971 POMGNT2Q8NAT1 580 aa12.83□□□□□ -0.36
USP39-206ENST00000448971 OR5J2Q8NH18 312 aa12.83□□□□□ -0.36
USP39-206ENST00000448971 TMEM255BQ8WV15 326 aa12.83□□□□□ -0.36
USP39-206ENST00000448971 COX4I2Q96KJ9 171 aa12.83□□□□□ -0.36
USP39-206ENST00000448971 OXGR1Q96P68 337 aa12.83□□□□□ -0.36
USP39-206ENST00000448971 USB1Q9BQ65 265 aaKnown RBP12.83□□□□□ -0.36
USP39-206ENST00000448971 SLC19A3Q9BZV2 496 aa12.83□□□□□ -0.36
USP39-206ENST00000448971 B3GAT1Q9P2W7 334 aa12.83□□□□□ -0.36
USP39-206ENST00000448971 MAGEL2Q9UJ55 1249 aa12.83□□□□□ -0.36
USP39-206ENST00000448971 RIMS3Q9UJD0 308 aa12.83□□□□□ -0.36
USP39-206ENST00000448971 DSCAMO60469 2012 aa12.83□□□□□ -0.36
USP39-206ENST00000448971 SONP18583 2426 aaKnown RBP12.82□□□□□ -0.36
USP39-206ENST00000448971 FAM171A2A8MVW0 826 aa12.82□□□□□ -0.36
USP39-206ENST00000448971 ZNF587BE7ETH6 402 aa12.82□□□□□ -0.36
USP39-206ENST00000448971 OR6A2O95222 327 aa12.82□□□□□ -0.36
USP39-206ENST00000448971 ITGA5P08648 1049 aa12.82□□□□□ -0.36
USP39-206ENST00000448971 ADORA3P0DMS8 318 aa12.82□□□□□ -0.36
USP39-206ENST00000448971 RBM34P42696 430 aaKnown RBP12.82□□□□□ -0.36
USP39-206ENST00000448971 YAP1P46937 504 aaKnown RBP12.82□□□□□ -0.36
USP39-206ENST00000448971 UGT2B15P54855 530 aa12.82□□□□□ -0.36
USP39-206ENST00000448971 NR1H2P55055 460 aa12.82□□□□□ -0.36
USP39-206ENST00000448971 ST3GAL3Q11203 375 aa12.82□□□□□ -0.36
USP39-206ENST00000448971 PPA1Q15181 289 aa12.82□□□□□ -0.36
USP39-206ENST00000448971 ZNF74Q16587 644 aa12.82□□□□□ -0.36
USP39-206ENST00000448971 LINC00114Q6XXX2 140 aa12.82□□□□□ -0.36
USP39-206ENST00000448971 NANOGNBQ7Z5D8 188 aa12.82□□□□□ -0.36
USP39-206ENST00000448971 NKAIN4Q8IVV8 208 aa12.82□□□□□ -0.36
USP39-206ENST00000448971 ZNF433Q8N7K0 673 aaPredicted RBP12.82□□□□□ -0.36
USP39-206ENST00000448971 ZIC4Q8N9L1 334 aa12.82□□□□□ -0.36
USP39-206ENST00000448971 RBM15BQ8NDT2 890 aaKnown RBP12.82□□□□□ -0.36
USP39-206ENST00000448971 PFN4Q8NHR9 129 aa12.82□□□□□ -0.36
USP39-206ENST00000448971 BCAS4Q8TDM0 211 aa12.82□□□□□ -0.36
USP39-206ENST00000448971 TMEM239Q8WW34 195 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms