RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 ZNF716A6NP11 495 aa16.02■□□□□ 0.16
TRAPPC4-203ENST00000447216 MCIDASD6RGH6 385 aa16.02■□□□□ 0.16
TRAPPC4-203ENST00000447216 TOXO94900 526 aa16.02■□□□□ 0.16
TRAPPC4-203ENST00000447216 GLI4P10075 376 aa16.02■□□□□ 0.16
TRAPPC4-203ENST00000447216 FCGR2AP12318 317 aa16.02■□□□□ 0.16
TRAPPC4-203ENST00000447216 GSTM3P21266 225 aa16.02■□□□□ 0.16
TRAPPC4-203ENST00000447216 IGFBP5P24593 272 aa16.02■□□□□ 0.16
TRAPPC4-203ENST00000447216 ZP4Q12836 540 aa16.02■□□□□ 0.16
TRAPPC4-203ENST00000447216 SLC17A1Q14916 467 aa16.02■□□□□ 0.16
TRAPPC4-203ENST00000447216 OGFRL1Q5TC84 451 aaPredicted RBP16.02■□□□□ 0.16
TRAPPC4-203ENST00000447216 SMARCD3Q6STE5 483 aa16.02■□□□□ 0.16
TRAPPC4-203ENST00000447216 MCEMP1Q8IX19 187 aa16.02■□□□□ 0.16
TRAPPC4-203ENST00000447216 GCNT2Q8N0V5 402 aa16.02■□□□□ 0.16
TRAPPC4-203ENST00000447216 SLC43A2Q8N370 569 aa16.02■□□□□ 0.16
TRAPPC4-203ENST00000447216 GALNT4Q8N4A0 578 aa16.02■□□□□ 0.16
TRAPPC4-203ENST00000447216 LRRC75AQ8NAA5 344 aa16.02■□□□□ 0.16
TRAPPC4-203ENST00000447216 OR9K2Q8NGE7 335 aa16.02■□□□□ 0.16
TRAPPC4-203ENST00000447216 OR8D4Q8NGM9 314 aa16.02■□□□□ 0.16
TRAPPC4-203ENST00000447216 TTYH2Q9BSA4 534 aa16.02■□□□□ 0.16
TRAPPC4-203ENST00000447216 PLA2G12AQ9BZM1 189 aa16.02■□□□□ 0.16
TRAPPC4-203ENST00000447216 RNF122Q9H9V4 155 aa16.02■□□□□ 0.16
TRAPPC4-203ENST00000447216 USE1Q9NZ43 259 aa16.02■□□□□ 0.16
TRAPPC4-203ENST00000447216 ING1Q9UK53 422 aaPredicted RBP16.02■□□□□ 0.16
TRAPPC4-203ENST00000447216 POFUT2Q9Y2G5 429 aa16.02■□□□□ 0.16
TRAPPC4-203ENST00000447216 CDH10Q9Y6N8 788 aa16.02■□□□□ 0.16
TRAPPC4-203ENST00000447216 A0A1W2PNV4 684 aa16.01■□□□□ 0.15
TRAPPC4-203ENST00000447216 MBD3L4A6NDZ8 208 aaPredicted RBP16.01■□□□□ 0.15
TRAPPC4-203ENST00000447216 MBD3L3A6NE82 208 aaPredicted RBP16.01■□□□□ 0.15
TRAPPC4-203ENST00000447216 MBD3L5A6NJ08 208 aaPredicted RBP16.01■□□□□ 0.15
TRAPPC4-203ENST00000447216 PYCARD-AS1I3L0S3 204 aa16.01■□□□□ 0.15
TRAPPC4-203ENST00000447216 NDUFB2O95178 105 aa16.01■□□□□ 0.15
TRAPPC4-203ENST00000447216 RCBTB2O95199 551 aa16.01■□□□□ 0.15
TRAPPC4-203ENST00000447216 ALPLP05186 524 aa16.01■□□□□ 0.15
TRAPPC4-203ENST00000447216 STSP08842 583 aa16.01■□□□□ 0.15
TRAPPC4-203ENST00000447216 POU1F1P28069 291 aa16.01■□□□□ 0.15
TRAPPC4-203ENST00000447216 RPL4P36578 427 aaKnown RBP16.01■□□□□ 0.15
TRAPPC4-203ENST00000447216 ALDH3A2P51648 485 aa16.01■□□□□ 0.15
TRAPPC4-203ENST00000447216 CTXN1P60606 82 aa16.01■□□□□ 0.15
TRAPPC4-203ENST00000447216 POU3F1Q03052 451 aaPredicted RBP16.01■□□□□ 0.15
TRAPPC4-203ENST00000447216 PMPCAQ10713 525 aa16.01■□□□□ 0.15
TRAPPC4-203ENST00000447216 COX10Q12887 443 aa16.01■□□□□ 0.15
TRAPPC4-203ENST00000447216 C1DQ13901 141 aaKnown RBP16.01■□□□□ 0.15
TRAPPC4-203ENST00000447216 SLC36A3Q495N2 470 aa16.01■□□□□ 0.15
TRAPPC4-203ENST00000447216 ALG10Q5BKT4 473 aa16.01■□□□□ 0.15
TRAPPC4-203ENST00000447216 EEF1A1P5Q5VTE0 462 aa16.01■□□□□ 0.15
TRAPPC4-203ENST00000447216 ATCAYQ86WG3 371 aa16.01■□□□□ 0.15
TRAPPC4-203ENST00000447216 UEVLDQ8IX04 471 aa16.01■□□□□ 0.15
TRAPPC4-203ENST00000447216 MBD3L2Q8NHZ7 208 aaPredicted RBP16.01■□□□□ 0.15
TRAPPC4-203ENST00000447216 PRR7Q8TB68 274 aa16.01■□□□□ 0.15
TRAPPC4-203ENST00000447216 INTS12Q96CB8 462 aaKnown RBP16.01■□□□□ 0.15
TRAPPC4-203ENST00000447216 TXNDC15Q96J42 360 aa16.01■□□□□ 0.15
TRAPPC4-203ENST00000447216 INIPQ9NRY2 104 aa16.01■□□□□ 0.15
TRAPPC4-203ENST00000447216 TBC1D23Q9NUY8 699 aa16.01■□□□□ 0.15
TRAPPC4-203ENST00000447216 KLHL9Q9P2J3 617 aa16.01■□□□□ 0.15
TRAPPC4-203ENST00000447216 NCOA6Q14686 2063 aaPredicted RBP16■□□□□ 0.15
TRAPPC4-203ENST00000447216 CCL21O00585 134 aa16■□□□□ 0.15
TRAPPC4-203ENST00000447216 TRAF3IP2O43734 574 aaPredicted RBP16■□□□□ 0.15
TRAPPC4-203ENST00000447216 VAMP5O95183 116 aa16■□□□□ 0.15
TRAPPC4-203ENST00000447216 OSMP13725 252 aa16■□□□□ 0.15
TRAPPC4-203ENST00000447216 ZNF43P17038 809 aa16■□□□□ 0.15
TRAPPC4-203ENST00000447216 PRPS1P60891 318 aa16■□□□□ 0.15
TRAPPC4-203ENST00000447216 ERVK-25P63136 954 aa16■□□□□ 0.15
TRAPPC4-203ENST00000447216 SIRPAP78324 504 aa16■□□□□ 0.15
TRAPPC4-203ENST00000447216 FOXF2Q12947 444 aa16■□□□□ 0.15
TRAPPC4-203ENST00000447216 TOP3AQ13472 1001 aaPredicted RBP16■□□□□ 0.15
TRAPPC4-203ENST00000447216 MELKQ14680 651 aa16■□□□□ 0.15
TRAPPC4-203ENST00000447216 RNPS1Q15287 305 aaKnown RBP16■□□□□ 0.15
TRAPPC4-203ENST00000447216 RFX4Q33E94 735 aa16■□□□□ 0.15
TRAPPC4-203ENST00000447216 ZIK1Q3SY52 487 aaPredicted RBP16■□□□□ 0.15
TRAPPC4-203ENST00000447216 ANKDD1AQ495B1 522 aa16■□□□□ 0.15
TRAPPC4-203ENST00000447216 CLEC12AQ5QGZ9 265 aa16■□□□□ 0.15
TRAPPC4-203ENST00000447216 NHLRC1Q6VVB1 395 aa16■□□□□ 0.15
TRAPPC4-203ENST00000447216 WDFY1Q8IWB7 410 aa16■□□□□ 0.15
TRAPPC4-203ENST00000447216 TUSC5Q8IXB3 177 aa16■□□□□ 0.15
TRAPPC4-203ENST00000447216 ZIC4Q8N9L1 334 aa16■□□□□ 0.15
TRAPPC4-203ENST00000447216 DNAJC9Q8WXX5 260 aa16■□□□□ 0.15
TRAPPC4-203ENST00000447216 ZNF385AQ96PM9 386 aaKnown RBP16■□□□□ 0.15
TRAPPC4-203ENST00000447216 DMRTA2Q96SC8 542 aa16■□□□□ 0.15
TRAPPC4-203ENST00000447216 TM9SF2Q99805 663 aa16■□□□□ 0.15
TRAPPC4-203ENST00000447216 KATNB1Q9BVA0 655 aa16■□□□□ 0.15
TRAPPC4-203ENST00000447216 SF3B5Q9BWJ5 86 aaKnown RBP16■□□□□ 0.15
TRAPPC4-203ENST00000447216 MED29Q9NX70 200 aa16■□□□□ 0.15
TRAPPC4-203ENST00000447216 MEMO1Q9Y316 297 aa16■□□□□ 0.15
TRAPPC4-203ENST00000447216 FLVCR1Q9Y5Y0 555 aa16■□□□□ 0.15
TRAPPC4-203ENST00000447216 IGKV3D-15A0A087WSY6 115 aa15.99■□□□□ 0.15
TRAPPC4-203ENST00000447216 E9PLN8 166 aa15.99■□□□□ 0.15
TRAPPC4-203ENST00000447216 H3BN98 237 aa15.99■□□□□ 0.15
TRAPPC4-203ENST00000447216 PPP1R3DO95685 299 aa15.99■□□□□ 0.15
TRAPPC4-203ENST00000447216 IFNGR1P15260 489 aa15.99■□□□□ 0.15
TRAPPC4-203ENST00000447216 SLC6A6P31641 620 aa15.99■□□□□ 0.15
TRAPPC4-203ENST00000447216 SLC16A1P53985 500 aa15.99■□□□□ 0.15
TRAPPC4-203ENST00000447216 PER3P56645 1201 aa15.99■□□□□ 0.15
TRAPPC4-203ENST00000447216 CLDN17P56750 224 aa15.99■□□□□ 0.15
TRAPPC4-203ENST00000447216 POU4F3Q15319 338 aa15.99■□□□□ 0.15
TRAPPC4-203ENST00000447216 GTF2IRD2BQ6EKJ0 949 aa15.99■□□□□ 0.15
TRAPPC4-203ENST00000447216 CREB3L2Q70SY1 520 aa15.99■□□□□ 0.15
TRAPPC4-203ENST00000447216 SLC35D2Q76EJ3 337 aa15.99■□□□□ 0.15
TRAPPC4-203ENST00000447216 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.99■□□□□ 0.15
TRAPPC4-203ENST00000447216 NUFIP2Q7Z417 695 aaKnown RBP15.99■□□□□ 0.15
TRAPPC4-203ENST00000447216 PXKQ7Z7A4 578 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms