RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 C4orf47A7E2U8 309 aa12.78□□□□□ -0.36
VPS52-212ENST00000445902 CTNSO60931 367 aa12.78□□□□□ -0.36
VPS52-212ENST00000445902 ACTL6AO96019 429 aa12.78□□□□□ -0.36
VPS52-212ENST00000445902 RPN2P04844 631 aa12.78□□□□□ -0.36
VPS52-212ENST00000445902 OR2T7P0C7T2 308 aa12.78□□□□□ -0.36
VPS52-212ENST00000445902 SYN1P17600 705 aa12.78□□□□□ -0.36
VPS52-212ENST00000445902 FLT3LGP49771 235 aa12.78□□□□□ -0.36
VPS52-212ENST00000445902 EEF1A1P68104 462 aaKnown RBP12.78□□□□□ -0.36
VPS52-212ENST00000445902 FNDC3BQ53EP0 1204 aaKnown RBP12.78□□□□□ -0.36
VPS52-212ENST00000445902 PRRT3Q5FWE3 981 aa12.78□□□□□ -0.36
VPS52-212ENST00000445902 MFSD12Q6NUT3 480 aa12.78□□□□□ -0.36
VPS52-212ENST00000445902 FIGNL1Q6PIW4 674 aa12.78□□□□□ -0.36
VPS52-212ENST00000445902 UNQ9370/PRO34162Q6UXP9 181 aa12.78□□□□□ -0.36
VPS52-212ENST00000445902 OR2T27Q8NH04 317 aa12.78□□□□□ -0.36
VPS52-212ENST00000445902 GLYATL2Q8WU03 294 aa12.78□□□□□ -0.36
VPS52-212ENST00000445902 ZNF764Q96H86 408 aaPredicted RBP12.78□□□□□ -0.36
VPS52-212ENST00000445902 IGSF21Q96ID5 467 aa12.78□□□□□ -0.36
VPS52-212ENST00000445902 Q96M85 177 aa12.78□□□□□ -0.36
VPS52-212ENST00000445902 SLC46A2Q9BY10 475 aa12.78□□□□□ -0.36
VPS52-212ENST00000445902 FAM117AQ9C073 453 aa12.78□□□□□ -0.36
VPS52-212ENST00000445902 PIGMQ9H3S5 423 aa12.78□□□□□ -0.36
VPS52-212ENST00000445902 EPHX3Q9H6B9 360 aa12.78□□□□□ -0.36
VPS52-212ENST00000445902 PRDM7Q9NQW5 492 aa12.78□□□□□ -0.36
VPS52-212ENST00000445902 ZNF281Q9Y2X9 895 aa12.78□□□□□ -0.36
VPS52-212ENST00000445902 IER3IP1Q9Y5U9 82 aa12.78□□□□□ -0.36
VPS52-212ENST00000445902 MYO7AQ13402 2215 aa12.77□□□□□ -0.36
VPS52-212ENST00000445902 TRAV18A0A075B6X5 111 aa12.77□□□□□ -0.36
VPS52-212ENST00000445902 TRBV23-1A0A0A0MS06 115 aa12.77□□□□□ -0.36
VPS52-212ENST00000445902 PQLC2LA1A4F0 135 aa12.77□□□□□ -0.36
VPS52-212ENST00000445902 FAM25EA8MYX2 175 aa12.77□□□□□ -0.36
VPS52-212ENST00000445902 H7C417 338 aa12.77□□□□□ -0.36
VPS52-212ENST00000445902 MAPK3P27361 379 aaPredicted RBP12.77□□□□□ -0.36
VPS52-212ENST00000445902 SNRPNP63162 240 aaKnown RBP12.77□□□□□ -0.36
VPS52-212ENST00000445902 OR7A5Q15622 319 aa12.77□□□□□ -0.36
VPS52-212ENST00000445902 PAN3Q58A45 887 aaKnown RBP12.77□□□□□ -0.36
VPS52-212ENST00000445902 AMZ2Q86W34 360 aa12.77□□□□□ -0.36
VPS52-212ENST00000445902 CCDC36Q8IYA8 594 aa12.77□□□□□ -0.36
VPS52-212ENST00000445902 SPAG16Q8N0X2 631 aa12.77□□□□□ -0.36
VPS52-212ENST00000445902 OR6N1Q8NGY5 312 aa12.77□□□□□ -0.36
VPS52-212ENST00000445902 OR5K2Q8NHB8 316 aa12.77□□□□□ -0.36
VPS52-212ENST00000445902 NMNAT3Q96T66 252 aa12.77□□□□□ -0.36
VPS52-212ENST00000445902 TINAGL1Q9GZM7 467 aaPredicted RBP12.77□□□□□ -0.36
VPS52-212ENST00000445902 PRSS16Q9NQE7 514 aa12.77□□□□□ -0.36
VPS52-212ENST00000445902 DHCR7Q9UBM7 475 aaKnown RBP12.77□□□□□ -0.36
VPS52-212ENST00000445902 MTFP1Q9UDX5 166 aa12.77□□□□□ -0.36
VPS52-212ENST00000445902 KCNE5Q9UJ90 142 aa12.77□□□□□ -0.36
VPS52-212ENST00000445902 CES1P1Q9UKY3 287 aa12.77□□□□□ -0.36
VPS52-212ENST00000445902 LOC100509620A0A075B734 347 aa12.77□□□□□ -0.37
VPS52-212ENST00000445902 TBC1D3EA0A087X179 549 aa12.77□□□□□ -0.37
VPS52-212ENST00000445902 F5H0A9 414 aaPredicted RBP12.77□□□□□ -0.37
VPS52-212ENST00000445902 M0QYG6 137 aa12.77□□□□□ -0.37
VPS52-212ENST00000445902 OR2T1O43869 369 aa12.77□□□□□ -0.37
VPS52-212ENST00000445902 CSN2P05814 226 aa12.77□□□□□ -0.37
VPS52-212ENST00000445902 CSF2RBP32927 897 aa12.77□□□□□ -0.37
VPS52-212ENST00000445902 DLSTP36957 453 aa12.77□□□□□ -0.37
VPS52-212ENST00000445902 ST8SIA6P61647 398 aa12.77□□□□□ -0.37
VPS52-212ENST00000445902 TRA2BP62995 288 aaKnown RBP12.77□□□□□ -0.37
VPS52-212ENST00000445902 MRPS10P82664 201 aaKnown RBP12.77□□□□□ -0.37
VPS52-212ENST00000445902 HTRA4P83105 476 aaPredicted RBP12.77□□□□□ -0.37
VPS52-212ENST00000445902 TEAD2Q15562 447 aa12.77□□□□□ -0.37
VPS52-212ENST00000445902 PLEKHN1Q494U1 663 aaPredicted RBP12.77□□□□□ -0.37
VPS52-212ENST00000445902 SYS1Q8N2H4 156 aa12.77□□□□□ -0.37
VPS52-212ENST00000445902 OR1J2Q8NGS2 313 aa12.77□□□□□ -0.37
VPS52-212ENST00000445902 MOAP1Q96BY2 351 aa12.77□□□□□ -0.37
VPS52-212ENST00000445902 ADAP2Q9NPF8 381 aa12.77□□□□□ -0.37
VPS52-212ENST00000445902 C14orf105Q9NVL8 296 aa12.77□□□□□ -0.37
VPS52-212ENST00000445902 HAO2Q9NYQ3 351 aa12.77□□□□□ -0.37
VPS52-212ENST00000445902 MKL2Q9ULH7 1088 aa12.77□□□□□ -0.37
VPS52-212ENST00000445902 TRAV8-7A0A075B6U6 113 aa12.76□□□□□ -0.37
VPS52-212ENST00000445902 OR14I1A6ND48 311 aa12.76□□□□□ -0.37
VPS52-212ENST00000445902 SPINT1O43278 529 aa12.76□□□□□ -0.37
VPS52-212ENST00000445902 CLEC3AO75596 197 aa12.76□□□□□ -0.37
VPS52-212ENST00000445902 LYPD3O95274 346 aa12.76□□□□□ -0.37
VPS52-212ENST00000445902 IFNGP01579 166 aa12.76□□□□□ -0.37
VPS52-212ENST00000445902 ANXA2P07355 339 aaKnown RBP12.76□□□□□ -0.37
VPS52-212ENST00000445902 NGFRP08138 427 aa12.76□□□□□ -0.37
VPS52-212ENST00000445902 OR4E1P0C645 316 aa12.76□□□□□ -0.37
VPS52-212ENST00000445902 OR8G3PP0DMU2 310 aa12.76□□□□□ -0.37
VPS52-212ENST00000445902 C6P13671 934 aa12.76□□□□□ -0.37
VPS52-212ENST00000445902 PRKAR2AP13861 404 aaKnown RBP12.76□□□□□ -0.37
VPS52-212ENST00000445902 ITGB8P26012 769 aa12.76□□□□□ -0.37
VPS52-212ENST00000445902 PTGFRP43088 359 aa12.76□□□□□ -0.37
VPS52-212ENST00000445902 POU4F2Q12837 409 aa12.76□□□□□ -0.37
VPS52-212ENST00000445902 PDZK1IP1Q13113 114 aa12.76□□□□□ -0.37
VPS52-212ENST00000445902 ABHD17CQ6PCB6 329 aa12.76□□□□□ -0.37
VPS52-212ENST00000445902 LRRTM1Q86UE6 522 aa12.76□□□□□ -0.37
VPS52-212ENST00000445902 SHISA5Q8N114 240 aa12.76□□□□□ -0.37
VPS52-212ENST00000445902 OR2L13Q8N349 312 aa12.76□□□□□ -0.37
VPS52-212ENST00000445902 OR51D1Q8NGF3 324 aa12.76□□□□□ -0.37
VPS52-212ENST00000445902 SDF2Q99470 211 aa12.76□□□□□ -0.37
VPS52-212ENST00000445902 TRPV4Q9HBA0 871 aa12.76□□□□□ -0.37
VPS52-212ENST00000445902 TREM1Q9NP99 234 aa12.76□□□□□ -0.37
VPS52-212ENST00000445902 A0A0D9SG52 128 aa12.76□□□□□ -0.37
VPS52-212ENST00000445902 TSPAN11A1L157 253 aa12.76□□□□□ -0.37
VPS52-212ENST00000445902 SCAMP1O15126 338 aa12.76□□□□□ -0.37
VPS52-212ENST00000445902 BCL2L11O43521 198 aa12.76□□□□□ -0.37
VPS52-212ENST00000445902 FARS2O95363 451 aaKnown RBP12.76□□□□□ -0.37
VPS52-212ENST00000445902 AVPI1Q5T686 147 aa12.76□□□□□ -0.37
VPS52-212ENST00000445902 GLT8D1Q68CQ7 371 aa12.76□□□□□ -0.37
VPS52-212ENST00000445902 TMPRSS11FQ6ZWK6 438 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms